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EBI DbfetchID BC046004; SV 1; linear; mRNA; STD; VRT; 1732 BP. XX AC BC046004; XX DT 11-FEB-2003 (Rel. 74, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 7) XX DE Danio rerio zgc:65788, mRNA (cDNA clone IMAGE:5600984), partial cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1732 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1732 RA Strausberg R.; RT ; RL Submitted (31-JAN-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Cancer RL Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, RL Bethesda, MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000008541; Danio_rerio. DR Ensembl-Tr; ENSDART00000087105; Danio_rerio. DR ImaGenes; IMAGp998D0912392Q. DR ImaGenes; IRAKp961K20103Q. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 103 Row: k Column: 20 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..1732 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="Sugano SJD adult male" FT /clone="IMAGE:5600984" FT /tissue_type="Whole body, adult male" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene <1..1732 FT /gene="zgc:65788" FT /note="synonym: fb60f06" FT CDS <1..1503 FT /codon_start=1 FT /gene="zgc:65788" FT /product="zgc:65788 protein" FT /db_xref="GOA:Q7ZV48" FT /db_xref="HSSP:1LG2" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q7ZV48" FT /db_xref="ZFIN:ZDB-GENE-030131-1140" FT /protein_id="AAH46004.1" FT /translation="IISTLILLADTRSKIHDRLKMSRFIFIAGFSLALCHFGLASQLVC FT YFTNWSQYRPDVGKYMPSNVDPHLCTHLIYAFSIINNENKLTTYEWNDETLYQSFNGLK FT QSNPNLKTLLAVGGWNFGTTQFSSMVSTPQNRQTFIQSSITFLRTHGFDGLDLDWEYPG FT SRGSPPEDKQRFTLLCKELVEAYQAESAATGRPRLMLTAAVAAGKGNIDAGYEIAEIAK FT YLDFINIMTYDFHGSWESVTGHNSPLYRGSGDIGDKIYYNTDFAMTYWRDQGAPVEKLR FT MGFAAYGRTFRLSSAVSGVGAPASGAASAGTYTREAGFWSYYEICTFLQGATVQQIVDQ FT KVPYATKGQEWVGFDNMESYKTKVDYLKEKGFGGAFVWALDLDDFSGQFCGQGKYPLIG FT QLRTLLNINNTEFPYNPPSTTVKPSGRPTRASATVPYATRPPVVPTAPSGSDFCTGKLE FT GIYEYPADSMIYIHCANGRTFIQRCPAKTVFDPNCKCCNWPK" XX SQ Sequence 1732 BP; 504 A; 368 C; 386 G; 474 T; 0 other; atcattagca cactgatact cttggctgat acaagatcca agatacatga tcgcttgaag 60 atgagcagat tcatttttat agccggcttt tcactggcat tgtgtcactt tggattggcg 120 tcccaacttg tatgttactt caccaactgg tctcagtaca gacctgatgt tggcaagtac 180 atgccatcta atgtggatcc acatctgtgc actcatttaa tttatgcctt ttccattatt 240 aataatgaaa ataaactgac aacctacgaa tggaatgatg aaactctcta ccagtccttt 300 aatggcctaa aacaaagcaa ccccaacctg aaaactctgt tggctgtcgg tggatggaac 360 tttggcacaa ctcagtttag cagcatggtg tccacgccac aaaacagaca gacctttatt 420 cagtccagta taacatttct gaggacccat ggatttgacg gtctggattt ggactgggag 480 tatcctggtt cacgtggaag tcctccagaa gacaagcaga gattcacttt gctctgtaag 540 gagcttgtag aagcttatca ggcagagagt gcagccactg gacgccccag actcatgctc 600 actgctgcag tggctgctgg gaaaggaaac attgacgctg gttatgaaat tgcagaaatt 660 gccaagtatt tggatttcat caatatcatg acctatgatt tccacggctc atgggagagt 720 gtcactggac acaacagtcc tctgtatcga ggctctggag acataggaga caaaatctac 780 tacaatactg actttgcaat gacctactgg cgagatcagg gcgctcctgt ggagaagctg 840 aggatgggct ttgctgcgta tggaagaacg tttcgcctgt cgtctgcagt cagtggagtt 900 ggagctccag ctagtggtgc tgcttcagct ggaacataca ccagagaagc tggattctgg 960 tcctattatg agatctgtac ttttctacaa ggagccactg tgcaacagat agttgatcag 1020 aaagttcctt atgcaacaaa aggacaggag tgggtgggat ttgataacat ggaaagttat 1080 aagactaagg tggactattt gaaggagaaa ggctttggag gagcttttgt ctgggctctg 1140 gatcttgatg acttcagtgg tcagttctgt gggcagggca aataccctct tattggacaa 1200 cttcgcaccc tgcttaatat caacaacact gagttcccat ataaccctcc aagcacaaca 1260 gttaagccca gtgggaggcc cacaagagca tctgctactg taccttatgc cacaagacct 1320 cctgttgtac cgacggcgcc ctcaggatca gacttctgta caggcaaatt agagggcatt 1380 tacgaatacc cagctgacag catgatctac attcattgtg ccaatggcag gaccttcata 1440 cagagatgtc ctgcaaagac agtctttgat cccaactgca aatgctgtaa ctggcctaaa 1500 taaccatgtt ataattgtta catgacaaag taaatgtttt tagtagattt gctaaatttg 1560 ggcccattaa tgccacaatt tgatttctgt catgtttaag ttaatgtttt aaaattggac 1620 atagagagcc aaacatatac cactgctttc ttttgaaaat gctacatttt gatggttgaa 1680 gaagtataat ttgcctaatt aaaactaacc tgaagcaaaa aaaaaaaaaa aa 1732 // |
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