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EBI DbfetchID BC045932; SV 1; linear; mRNA; STD; VRT; 2028 BP. XX AC BC045932; XX DT 11-FEB-2003 (Rel. 74, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 12) XX DE Danio rerio aldehyde dehydrogenase 9 family, member A1a, mRNA (cDNA clone DE MGC:56131 IMAGE:5411836), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2028 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2028 RG NIH MGC Project RA ; RT ; RL Submitted (31-JAN-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000002167; Danio_rerio. DR Ensembl-Gn; ENSDARG00000005098; Danio_rerio. DR Ensembl-Gn; ENSDARG00000007807; Danio_rerio. DR Ensembl-Gn; ENSDARG00000019444; Danio_rerio. DR Ensembl-Gn; ENSDARG00000031782; Danio_rerio. DR Ensembl-Gn; ENSDARG00000039884; Danio_rerio. DR Ensembl-Gn; ENSDARG00000069100; Danio_rerio. DR Ensembl-Gn; ENSDARG00000078935; Danio_rerio. DR Ensembl-Tr; ENSDART00000012835; Danio_rerio. DR Ensembl-Tr; ENSDART00000020628; Danio_rerio. DR Ensembl-Tr; ENSDART00000021856; Danio_rerio. DR Ensembl-Tr; ENSDART00000041721; Danio_rerio. DR Ensembl-Tr; ENSDART00000047175; Danio_rerio. DR Ensembl-Tr; ENSDART00000057159; Danio_rerio. DR Ensembl-Tr; ENSDART00000058342; Danio_rerio. DR Ensembl-Tr; ENSDART00000100281; Danio_rerio. DR Ensembl-Tr; ENSDART00000100283; Danio_rerio. DR Ensembl-Tr; ENSDART00000108950; Danio_rerio. DR Ensembl-Tr; ENSDART00000111707; Danio_rerio. DR Ensembl-Tr; ENSDART00000114529; Danio_rerio. DR ImaGenes; IMAGp998K0512050Q. DR ImaGenes; IRAKp961G12103Q. DR ImaGenes; IRBOp991F0819D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 103 Row: g Column: 12 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 28277866. XX FH Key Location/Qualifiers FH FT source 1..2028 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="Sugano SJD adult male" FT /clone="MGC:56131 IMAGE:5411836" FT /tissue_type="Whole body, adult male" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2028 FT /gene="aldh9a1a" FT /note="synonyms: aldh9a1l, wu:fb64d09" FT CDS 72..1598 FT /codon_start=1 FT /gene="aldh9a1a" FT /product="aldehyde dehydrogenase 9 family, member A1a" FT /db_xref="GOA:Q7ZVB2" FT /db_xref="HSSP:1A4S" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/Swiss-Prot:Q7ZVB2" FT /db_xref="ZFIN:ZDB-GENE-030131-1257" FT /protein_id="AAH45932.1" FT /translation="MAQQPLLSLPEFQSVSTGTLVVKEPLNFWGGARVKPRDTKNSEPV FT YEPATGRVLCDMIPCGEEEVDQAIKSAHSAYLKWSQLSGMERSRIMLEAARIIRERRNA FT IAKAEVANNGKSITEAEVDIDVAWQCIEYYAGIAPTLSGQHIQLPGGSFAYTRREPLGV FT CVGIGAWNYPFQIAAWKSAPALACGNAMVFKPSPMTPVTAVMLAEIYKEAGVPDGLFNV FT VQGGAETGSLLCHHPMVAKVSFTGSVPTGKKVMEMAAKSVKQVTLELGGKSPLIIFKDC FT ELENAIKGALMANFLTQGEVCCNGTRVFVQREIMPKFLEEVVKRTKAISVGDPLCEGTR FT MGALISKPHMEKVLGFIKQAKEQGGKVLCGGERFVPNDPKLKDGYFVSPCVLDNCRDDM FT TCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIARAHRVAANLQAGTCY FT INNYNVGPVEVPFGGYKMSGFGRENGTVTIEYYSQLKTVVVEMGDVESLF" XX SQ Sequence 2028 BP; 557 A; 416 C; 537 G; 518 T; 0 other; atagctgcac ccaccgagct gcagaacaga agcaggctct gttcgaaatc tgtgttcccg 60 tcaaaaacac catggctcag caaccgcttc tgtcgctgcc cgagttccag agcgtctcca 120 cgggcacttt ggtggtgaag gagccgctga atttctgggg aggagcgaga gtgaagccga 180 gggacacaaa gaactccgag ccagtatacg agccagcaac tggtcgtgtg ctgtgtgata 240 tgattccttg tggagaagag gaggtagatc aggctattaa aagtgctcat tctgcatacc 300 taaaatggag tcaattatca ggaatggaga ggtcccgaat catgctggag gctgccagaa 360 ttatcaggga gcggagaaat gcaattgcaa aagcagaagt ggccaacaat ggcaaatcca 420 tcactgaggc tgaggtggat attgatgttg cttggcagtg catcgaatac tatgctggca 480 ttgcccccac actgtcaggt cagcatatac agcttccagg aggatctttt gcctacacca 540 gaagagagcc tttgggagtg tgcgttggca tcggtgcttg gaattaccca ttccagatcg 600 ctgcctggaa atcagctcca gcattggcct gcggtaatgc catggtgttt aaaccgtctc 660 ccatgacccc ggtgactgca gtcatgttgg cagagatcta caaagaggca ggtgtcccgg 720 atggactttt taatgtggta caaggaggag ctgaaacggg aagcctgctg tgtcaccatc 780 ccatggtggc taaagtgtcc ttcactggta gtgttcccac tggaaagaag gttatggaaa 840 tggctgctaa aagtgtgaag caggtgactc tggagcttgg aggaaagtca ccgctgatca 900 tctttaagga ttgtgagctg gagaatgcta tcaaaggagc ccttatggcc aacttcctca 960 cccagggaga ggtgtgctgc aatggaacaa gggtgtttgt gcagagggag atcatgccaa 1020 agtttttgga ggaagttgtg aagaggacca aggccatctc tgtgggagat cctctgtgtg 1080 aaggaacacg catgggtgct ctgattagca aaccacacat ggaaaaagtg ctgggcttca 1140 tcaagcaagc taaagagcag ggtggaaagg ttttatgtgg aggagaacga tttgtcccca 1200 atgatcccaa actgaaagac ggatactttg tgtctccatg tgtgctggat aactgcagag 1260 atgatatgac ctgtgtgaag gaggagatct ttggccctgt gatgtctgtt ctgccctttg 1320 acactgaaga ggaggtgctt cagagagcca ataacacaac ctttggcttg gcgtctggag 1380 tcttcaccag ggatattgca cgtgcccaca gagttgctgc gaaccttcaa gcaggaacct 1440 gctacatcaa caactacaat gtcgggcctg tggaagttcc ttttggaggc tacaagatgt 1500 caggttttgg aagggagaac ggtactgtga ccattgaata ttactctcag ctcaagactg 1560 ttgtggtgga gatgggagac gtggagagcc tgttttaagc tattgttagg ttaaccacca 1620 gcactccgga ccgcaatgtg atttttccca gttttcagat ctgtagctct ggctttgcaa 1680 tagaagtcaa ttactagaag actagctaag tgctgtactg ctttgacagt ctatatttat 1740 gtcactcatt tccattgggc ctcaatgtgt gagaacgctt gaagttactt aactaaccaa 1800 agtattttcc agatccgtta aacatgtgaa ttttgatgta ctaacagttc aatcaaaagc 1860 aagtgccttt ggatatgttt ctactataca agtttattac attccaagac ttgttgtttc 1920 accgctgcac catgaagaat ttgtattaca ctggtggttt acaagtttca atttgaaata 1980 aatatacctt ggctttcaag agtaaaaaaa aaaaaaaaaa aaaaaaaa 2028 // |
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