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EBI DbfetchID BC045854; SV 1; linear; mRNA; STD; VRT; 1944 BP. XX AC BC045854; XX DT 11-FEB-2003 (Rel. 74, Created) DT 20-JUN-2006 (Rel. 88, Last updated, Version 6) XX DE Danio rerio ER degradation enhancer, mannosidase alpha-like 2, mRNA (cDNA DE clone IMAGE:3819747), partial cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1944 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1944 RG NIH MGC Project RA ; RT ; RL Submitted (31-JAN-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000021891; Danio_rerio. DR Ensembl-Tr; ENSDART00000033774; Danio_rerio. DR ImaGenes; IMAGp998J049112Q. DR ImaGenes; IRAKp961A23103Q. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Preparation: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 103 Row: a Column: 23. XX FH Key Location/Qualifiers FH FT source 1..1944 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /strain="AB" FT /mol_type="mRNA" FT /clone_lib="Sugano Kawakami zebrafish DRA" FT /clone="IMAGE:3819747" FT /tissue_type="Whole body, adult, (one male and one female, FT including unfertilized eggs)" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene <1..1944 FT /gene="edem2" FT CDS <1..1801 FT /codon_start=2 FT /gene="edem2" FT /product="edem2 protein" FT /db_xref="GOA:Q7ZVI0" FT /db_xref="HSSP:1DL2" FT /db_xref="InterPro:IPR001382" FT /db_xref="UniProtKB/TrEMBL:Q7ZVI0" FT /db_xref="ZFIN:ZDB-GENE-060519-1" FT /protein_id="AAH45854.1" FT /translation="AFARTHAQCVHFLLLLLYSICAPPCSRELLYYLPLFTSRYFMLTF FT LFSAIFCAAYLSPIISHVKGRDFTEQEMSHYRDRVKSMFYHAYNSYPDNAYPYDELRPL FT TCDGQDTWGSFSLTLIDALDTLLILGNHTEFQRVATLLQDTVDFDIDVNASVFETNIRV FT VGGLLSAHLLSKRAGMKVEEGWPCSGPLLRMAEDAARKLLPAFQTPTGMPYGTVNLLRG FT VNPGETPVTCTAGVGTFILEFSTLSRLTGDPVFENVARKALRALWRTRSDIGLVGNHID FT VITSKWVAQDAGIGAGVDSYFEYLVKGAIMLQDEKLLTMFYEFDKSIKNYTKFDDWYLW FT VQMHKGTVSMPVFQSLEAFWPGMQSLIGDISSATKSFHNYYSVWRQFGGLPEFYSIPQG FT YTVDKREGYPLRPELIESAMYLYKATGDPSIIQLGRDAVESIDRISRVNCGFATDVRDH FT KLDNRMESFFLAETIKYLYLLFDPDNFLHNTGTEFELGGLRGDCILSAGGYVFNTEAHP FT LDPAALHCCSREQQDRREIQDILLSFSQPQTEEPPRDQNAGGSPESIALKPGEQRKAPV FT LSCPTQPFSAKLAVMGQVFSDNS" XX SQ Sequence 1944 BP; 473 A; 487 C; 487 G; 497 T; 0 other; agcattcgct cgcacgcacg cgcagtgtgt gcacttccta ttattattat tgtatagtat 60 ttgtgcacct ccatgtagcc gggaattatt gtattattta cctctgttca catctcgtta 120 cttcatgctt actttccttt tctccgccat tttctgcgcc gcgtacctgt ctccgatcat 180 cagtcatgtt aaaggcagag actttactga gcaggaaatg tctcattaca gggacagagt 240 aaagtccatg ttttatcatg catataacag ctatccggac aatgcatatc catatgatga 300 gctgaggccg ctgacctgtg atggacagga cacctggggc agtttctccc tcacactcat 360 agatgctctg gacacattgc tgattctagg aaaccacaca gagtttcagc gtgtggccac 420 tctgcttcag gacactgttg acttcgacat cgacgtcaat gcgtctgtgt ttgagacaaa 480 tatacgagtg gtcggtgggc ttctctcggc tcatctgctc tccaagcgtg ctgggatgaa 540 ggtggaggag ggctggccct gctctggacc ccttctgcgc atggcagagg acgccgctcg 600 aaaactgctt cctgctttcc agacgcccac agggatgccg tatggaacag taaacctgct 660 gcggggagtg aaccccggcg aaacccctgt cacctgcacc gccggagtgg gcaccttcat 720 cctagagttt tccaccctca gtcgactcac cggtgaccct gtgttcgaga atgttgcccg 780 caaagctctc agggccttat ggagaacgcg ctctgacatc ggcctggtgg gcaatcacat 840 agatgtcata acctcgaagt gggtcgctca ggatgcaggc attggagcag gagttgattc 900 atatttcgaa tatcttgtta agggtgccat catgcttcaa gatgagaagc tgttgacaat 960 gttttatgaa tttgataagt ccataaagaa ctacactaag tttgatgatt ggtatctgtg 1020 ggtgcagatg cataaaggaa cagtatcaat gcctgtgttt cagtctttgg aggcgttctg 1080 gcctggaatg cagagtttaa taggtgatat ttccagtgct acaaagagct tccacaacta 1140 ctacagcgtg tggcggcagt ttggaggtct cccagaattc tacagcattc ctcaaggtta 1200 cacagtggac aagcgagagg gatatccact gcggccagag ttaatagaga gcgcaatgta 1260 tctgtataag gccactggag acccttcaat catccaactt ggccgagatg cagtggagtc 1320 cattgacaga atcagccggg tcaactgtgg ctttgccact gatgtaaggg accacaagtt 1380 ggacaaccgc atggaatcct tcttcctagc cgagaccatt aaatacctct acctcctctt 1440 cgatcctgac aacttccttc acaacacggg cacagagttt gagctggggg gtctgcgggg 1500 tgactgtatt ctcagcgcgg ggggctatgt gttcaacaca gaggctcatc cgctggaccc 1560 cgccgcactc cactgctgca gccgagagca gcaggaccgc agggagattc aggacatcct 1620 cctcagcttc tcgcagccgc aaacagagga gccaccacgg gaccagaacg caggtggctc 1680 tccggagagc attgcactga agccgggaga gcagaggaaa gcgccggtgc tctcctgccc 1740 tacgcagccc tttagtgcca aactggccgt catgggtcag gtcttctctg acaactcttg 1800 aacactgtcc taccgtgcgt aaagatgtag atttaccttt gtaatttaac tttggagaga 1860 ttaaatgttt tctaaatatg tgtggagttt tttccactcc ttttattaaa actattaagg 1920 gactgttaaa aaaaaaaaaa aaaa 1944 // |
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