 |
|
EBI DbfetchID BC045347; SV 1; linear; mRNA; STD; VRT; 2496 BP. XX AC BC045347; XX DT 11-FEB-2003 (Rel. 74, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 13) XX DE Danio rerio acylglycerol kinase, mRNA (cDNA clone MGC:55462 IMAGE:2639944), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2496 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2496 RG NIH MGC Project RA ; RT ; RL Submitted (31-JAN-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000013443; Danio_rerio. DR Ensembl-Tr; ENSDART00000006109; Danio_rerio. DR ImaGenes; IMAGp998C176587Q. DR ImaGenes; IRAKp961J17101Q. DR ImaGenes; IRBOp991H0113D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Preparation: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Institute for Systems Biology CC http://www.systemsbiology.org CC contact: amadan@systemsbiology.org CC Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha CC Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 101 Row: j Column: 17 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 28277570. XX FH Key Location/Qualifiers FH FT source 1..2496 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /strain="AB" FT /mol_type="mRNA" FT /clone_lib="Sugano Kawakami zebrafish DRA" FT /clone="MGC:55462 IMAGE:2639944" FT /tissue_type="Whole body, adult, (one male and one female, FT including unfertilized eggs)" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2496 FT /gene="agk" FT /note="synonyms: fi38e09, zgc:55462, wu:fi38e09, mulk" FT CDS 121..1389 FT /codon_start=1 FT /gene="agk" FT /product="acylglycerol kinase" FT /db_xref="GOA:Q7ZW00" FT /db_xref="InterPro:IPR001206" FT /db_xref="UniProtKB/Swiss-Prot:Q7ZW00" FT /db_xref="ZFIN:ZDB-GENE-030131-6202" FT /protein_id="AAH45347.1" FT /translation="MARVVKVFRTLRNHWKKSTFAVCVLSYGGHWLYGKHCDSVLRREA FT CIEARAFGQQLIGPQEILKKATVILNPAACKGKANQLFEKNAAPILHLAGVEVKIVKTD FT YEGQAKKLMELMEQTDMLIIAGGDGTLQEVITGLLRRADEEIFSKTPIGFIPLGSSNSL FT SQSLHLVSDNKVQHITSATLSILKGETVPLDVLQIKGEKEQPVFALLGLRWGAFRDVAT FT SISKYWYLGPLKTRAAHWFSSLKQWPQVHVASLSYLAPVPRPPDLPDEIPQRPNLLYRI FT YRRLQNYWNPPLEEPPKEPEPEQWESKDVSTLELTVLTHNKNPVKRRVDDSMLISLDPE FT SLTAGQFITEGTNKSVDPMEPIENAVQIEASAARLELPEEGAGFYDIDNQEYEAMSVEV FT RLLPRKLRFFCSAERREQLAEAQ" XX SQ Sequence 2496 BP; 802 A; 462 C; 540 G; 692 T; 0 other; tgcaccggtc atgctttggg agatcaatgg aatgtcaacg gtgaagagct ctattcagtc 60 ttcttgctca tttagacatg caaatatcgg ctgtatagaa agcccgtata tataaaaata 120 atggctcggg tggtgaaagt gttccgaact ttaagaaatc attggaaaaa gtccacattt 180 gcggtgtgtg tgctctcata tggaggacac tggctctatg gaaagcactg tgacagtgtg 240 ctgcgacgtg aagcatgtat agaggctagg gcatttggtc aacagttaat tggacctcag 300 gagattctga agaaagccac agtcattctg aatcctgctg cctgtaaagg gaaggcgaat 360 cagttgtttg agaagaatgc agctcccatt ttacatctgg ctggtgtgga ggttaaaatt 420 gtgaagactg attatgaagg ccaggcaaaa aagctcatgg aactgatgga gcaaacggat 480 atgctgatca tcgctggcgg tgatgggacg ttacaggagg tgataaccgg cctacttcgt 540 agagctgatg aggagatctt cagtaaaaca ccaattggtt ttatccctct gggttccagt 600 aactctctga gtcagagtct gcatctagtc tctgacaata aagtacagca cattacctca 660 gcaactcttt caatcttaaa aggagaaacg gttccactgg acgtactgca gataaagggt 720 gagaaggagc agccagtgtt tgcgctgttg ggattacgtt ggggtgcatt cagagatgta 780 gcaacttcta ttagcaaata ttggtacctt ggccccttga agacgagagc agcacattgg 840 tttagtagcc tgaagcagtg gccacaggtt catgtggctt ccctatccta tctggctccc 900 gtacctcgtc cacctgacct tccagatgaa ataccacagc gacccaacct cctctaccgc 960 atctaccgca gactccagaa ctactggaac cctcctttag aagagccacc aaaagagcct 1020 gagccagagc aatgggagag caaagacgtt tctacattgg agcttaccgt tctcacacac 1080 aacaagaacc cagtcaagag gcgtgtagat gattcaatgc tgatcagtct ggacccagaa 1140 tccctcacag ctggtcagtt catcactgag gggactaata aatcagtgga tcccatggag 1200 cccatagaaa atgctgtaca gatagaagcc agtgctgcac gtcttgaact cccagaggag 1260 ggtgctggct tttacgacat tgacaatcag gaatatgagg caatgtctgt cgaagtgcga 1320 ctgctgccaa gaaaactgag attcttttgc agtgcagagc gcagagagca acttgcagaa 1380 gctcagtgat gacataaaaa tgtggattca ttttccaaaa gtacaagagg gaaaaaacat 1440 atcagctacc ccaaaaaaag aagtcgtctt cattgcgtaa cttgacaact tgtgtactat 1500 gaacttgaaa aaatgagttt acacgtaatg agttctgtca tcatttactc acactcatgt 1560 tgttccaaac atataagaaa tgtagttatc ttcaaaaatg aggatatttg tttctgcatc 1620 gagtctgttc acccaaaact tgaacatatt tgattatggc cagagagatt ccaagtttta 1680 aaataaaatc taatgtgcgc taaagagaca tgatcacttt attagattac ccttaaattt 1740 agggtttcat taaaacaagc atcgagctat aaacaaacat ctttaaaaca tttaaatttg 1800 atcacagaag ctcagtgatg cttgcttgac atatgagaac cactgagatt catttttcac 1860 accaacacgt ttagcttctt tttttactga tgcctacatg tgaataaaat aactgtattt 1920 attttggggg aaataaaaaa tgtaaaatgt ttaaagttga acaaaagtct ttggaatgac 1980 atgaggagat atgagacata taatgaaata aattttaatt tggaaagata gttgaatgcg 2040 cttataaaca tgttataaat ggtgtcaact tagtatggaa caggttgttt tcctgttttg 2100 aacttttctt acaaactctg gtttacttta agtgaatgtt ttcctcaaag agcttaatat 2160 taccttgaag agtgcaaaaa tgcctttaga agagatttct cactaaaaaa aggaaaatat 2220 actgacaatt tacttacttt caagtgggtt aaaagtgtta ctttttctgt tggacacaaa 2280 agaagatact tcaaagaatg ttggaagctg gtagtcattt cttgtgtgtt aacaaaaaag 2340 agagaaactc agatttggct gagaaaatga tgtcagaata tttgtttttg ggtgaactgc 2400 ccctttaaga aactcaaact agttatgctg taaaagtttg accagatgag gaccaataat 2460 aaaagtcatt atcatgcttt aaaaaaaaaa aaaaaa 2496 // |
|