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EBI DbfetchID BC041248; SV 1; linear; mRNA; STD; VRT; 957 BP. XX AC BC041248; XX DT 27-DEC-2002 (Rel. 74, Created) DT 27-MAY-2005 (Rel. 83, Last updated, Version 5) XX DE Xenopus laevis similar to FK506 binding protein 1A, 12kDa, mRNA (cDNA clone DE MGC:52785 IMAGE:4684280), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-957 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-957 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-957 RA Klein S., Strausberg R.; RT ; RL Submitted (16-DEC-2002) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998P0910568Q. DR ImaGenes; IRAKp961I1294Q. DR ImaGenes; IRBHp990C112D. DR ImaGenes; RZPDp988G0564D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Institute for Systems Biology CC http://www.systemsbiology.org CC contact: amadan@systemsbiology.org CC Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha CC Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 94 Row: i Column: 12 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..957 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb4" FT /clone="MGC:52785 IMAGE:4684280" FT /tissue_type="Embryo, stage 31/32, Xenopus" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene 1..957 FT /gene="MGC52785" FT CDS 62..388 FT /codon_start=1 FT /product="MGC52785 protein" FT /db_xref="GOA:O42123" FT /db_xref="HSSP:1FKL" FT /db_xref="InterPro:IPR001179" FT /db_xref="UniProtKB/Swiss-Prot:O42123" FT /protein_id="AAH41248.1" FT /translation="MGVQVETITEGDGRTFPKKGQTVVVHYVGSLENGKKFDSSRDRNK FT PFKFIIGRCEVIRGWEEGVAQMSVGQRARLTCSPDFAYGATGHPGIIPPNATLTFDVEL FT LRLE" FT misc_feature 92..376 FT /note="FKBP; Region: FKBP-type peptidyl-prolyl cis-trans FT isomerase" XX SQ Sequence 957 BP; 210 A; 243 C; 267 G; 237 T; 0 other; gcgtgctcag tgtgtgttgc ggctggtgat ctccgtgtta gagtaacggg accgagacgg 60 gatgggagtg caagtagaaa ccattaccga gggggacggg cgcacgtttc caaagaaggg 120 ccagactgtg gtggtacatt atgtggggtc gctggagaac ggaaagaagt ttgattcgtc 180 aagggacagg aacaagcctt tcaagttcat aattggacgg tgcgaagtga tccgtggctg 240 ggaggagggc gtggcacaga tgagtgtggg gcagagggca cgactcacct gctctcctga 300 ctttgcatac ggggcaacag gacaccctgg cattattccc cccaacgcca ccctgacctt 360 tgatgtggag ctactgaggc tggagtgaac agccctcata gtgggtgctg aggttcctgc 420 ccagatggtt accggtgcag agagtgcagt acacagactg gacacatcct gacctccctc 480 ccctgtgccc ccttccccac actctgcctc ttgctagtct gtttcttgcc cccatcaccc 540 ccttcctttg ggggccacag tgtttccagg cacaaacaca ttggatggat atttgggggt 600 agatggactt tccttaccag aacattgacc actcacaacc agcaatacat cagccctgtg 660 gcaaattgga gtaacgctgt tacctggctt cctggctaag gggtggtgac cctatttgtg 720 ttggtgccag gggcccctaa tggaaagctt gctgttaact ctttcagggt agactggctg 780 tgcactgcta gtgttgctgt gggtaaatgt gttggtcttt catacccatc cttgtcatgg 840 ggtgcagttg tctcctcttt accttctttg tggcaggtcc ccactgtgta ggcagcatgc 900 accccacaca tactggactc tccaataaac tgcttttctc taaaaaaaaa aaaaaaa 957 // |
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