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EBI Dbfetch

ID   BC032302; SV 1; linear; mRNA; STD; HUM; 1261 BP.
XX
AC   BC032302;
XX
DT   28-JUN-2002 (Rel. 72, Created)
DT   15-OCT-2008 (Rel. 97, Last updated, Version 6)
XX
DE   Homo sapiens UDP-glucose ceramide glucosyltransferase-like 2, mRNA (cDNA
DE   clone IMAGE:5169731), complete cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1261
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-1261
RA   Strausberg R.;
RT   ;
RL   Submitted (06-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Cancer
RL   Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03,
RL   Bethesda, MD 20892-2590, USA
XX
DR   ASTD; TRAN00000104659.
DR   Ensembl-Gn; ENSG00000102595; Homo_sapiens.
DR   Ensembl-Tr; ENST00000376712; Homo_sapiens.
DR   H-InvDB; HIT000041474.
DR   ImaGenes; IMAGp998C1211422Q.
DR   ImaGenes; IOH21655.
DR   ImaGenes; IRAKp961E1964Q.
DR   ImaGenes; IRATp970E0551D.
XX
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Life Technologies, Inc.
CC   cDNA Library Preparation: Life Technologies, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: National Institutes of Health Intramural
CC   Sequencing Center (NISC),
CC   Gaithersburg, Maryland;
CC   Web site: http://www.nisc.nih.gov/
CC   Contact: nisc_mgc@nhgri.nih.gov
CC   Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC   Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC   Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC   Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC   Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC   McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC   Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC   Young,A., Zhang,L.-H. and Green,E.D.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 64 Row: e Column: 19
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 11386200
CC   This clone has the following problem: The cds is short compared to
CC   the longest cds in the locus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1261
FT                   /organism="Homo sapiens"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_119"
FT                   /clone="IMAGE:5169731"
FT                   /tissue_type="Brain, adult medulla"
FT                   /note="Vector: pCMV-SPORT6"
FT                   /db_xref="taxon:9606"
FT   gene            1..1261
FT                   /gene="UGCGL2"
FT                   /note="synonyms: FLJ10873, HUGT2, FLJ11485"
FT   CDS             171..1007
FT                   /codon_start=1
FT                   /product="UGCGL2 protein"
FT                   /db_xref="GOA:Q8N5K0"
FT                   /db_xref="HGNC:15664"
FT                   /db_xref="InterPro:IPR009448"
FT                   /db_xref="UniProtKB/TrEMBL:Q8N5K0"
FT                   /protein_id="AAH32302.1"
FT                   /translation="MAPAKATNVVRLLLGSTALWLSQLGSGTVAASKSVTAHLAAKWPE
FT                   TPLLLEASEFMAEESNEKFWQFLETVQELAIYKQTESDYSYYNLILKKAGQFLDNLHIN
FT                   LLKFAFSIRAYSPAIQMFQQIAADEPPPDGCNAFVVIHKKHTCKINEIKKLLKKAASRT
FT                   RPYLFKGDHKFPTNKENLPVVILYAEMGTRTFSAFHKVLSEKAQNEEILYVLRHYIQKP
FT                   SSRKMYLSGYGVELAIKSTEYKALDDTQVKTVTNTTVEDETETNEVQGFLFGKLKS"
XX
SQ   Sequence 1261 BP; 407 A; 263 C; 284 G; 307 T; 0 other;
     cgcgccggag cgggacacgc atgcgccggt ctggacccgg cacccagtaa cggactcgag        60
     ctcctcccac cggaagtggg cagccgcgca gcgggaagag ccggccgaag cgtggcggcc       120
     acagactgtg ggtaccgggt ccgagggact cgcgcttttc tctccgtgcc atggcgccag       180
     cgaaagccac gaacgtggtg cggctgctac taggctccac agcgctgtgg ctttcgcagc       240
     tcggctccgg gacggtcgcc gcgtccaagt cggtgactgc ccacttggcc gcgaagtggc       300
     ccgagacccc gctgctgctg gaggcaagtg aatttatggc agaagaaagt aatgaaaaat       360
     tttggcagtt tttggaaact gtgcaagaat tagcaattta taagcaaaca gaatcagatt       420
     attcttatta caacttaatc ctgaagaaag ctggacagtt tctagacaat ttacacatca       480
     accttttaaa gtttgctttc tctataaggg catactcccc agctattcag atgtttcagc       540
     agattgcagc tgatgagcca ccaccagatg gttgtaatgc atttgtggtt attcataaga       600
     agcacacctg taaaattaat gagattaaaa agctgctgaa gaaagctgct tcaaggacta       660
     gaccttatct atttaaagga gatcacaaat ttcctacaaa caaagagaac ttaccagtgg       720
     tgattctcta tgccgaaatg ggtactagaa catttagtgc atttcacaaa gtattgtctg       780
     aaaaagctca aaatgaggaa attctgtatg ttcttcgcca ttatattcag aaaccaagct       840
     cacggaaaat gtacttatct gggtatggtg tggagctagc aattaagagt acagaataca       900
     aagcactgga tgatacccaa gttaaaactg tgactaatac tactgtagag gatgagactg       960
     aaacaaatga agttcaagga tttctctttg ggaaactaaa atcttagttt tcaagcagct      1020
     tctcaaataa tgtccgctcc agtttatgat gccattaaat taatgaaaga catttcacag      1080
     aacttcccca taaaagccag atctctaacc agaattgctg taaatcaaca tatgagagaa      1140
     gaaataaagg aaaatcaaaa gtatattcca gaatttcttc cgaggtagta tggttttctt      1200
     cataggataa agaataaagg ctgtgagtta attaaaaaaa aaaaaaaaaa aaaaaaaaaa      1260
     a                                                                      1261
//


  
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