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EBI DbfetchID BC026234; SV 1; linear; mRNA; STD; HUM; 1936 BP. XX AC BC026234; XX DT 09-APR-2002 (Rel. 71, Created) DT 15-OCT-2008 (Rel. 97, Last updated, Version 12) XX DE Homo sapiens chromosome 15 open reading frame 29, mRNA (cDNA clone DE MGC:22175 IMAGE:4693115), complete cds. XX KW MGC. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1936 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1936 RG NIH MGC Project RA ; RT ; RL Submitted (02-APR-2002) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSG00000134152; Homo_sapiens. DR Ensembl-Tr; ENST00000256544; Homo_sapiens. DR H-InvDB; HIT000040154. DR ImaGenes; IMAGp958P121514Q. DR ImaGenes; IRALp962M1636Q. DR ImaGenes; IRAUp969E0586D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: CLONTECH CC cDNA Library Preparation: CLONTECH Laboratories, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAL Plate: 36 Row: m Column: 16 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 13376012. CC Differences found between this sequence and the human reference CC genome (build 36) are described in misc_difference features below. XX FH Key Location/Qualifiers FH FT source 1..1936 FT /organism="Homo sapiens" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_77" FT /clone="MGC:22175 IMAGE:4693115" FT /tissue_type="Lung" FT /note="Vector: pDNR-LIB" FT /db_xref="taxon:9606" FT gene 1..1936 FT /gene="C15orf29" FT /note="synonym: FLJ22557" FT CDS 53..967 FT /codon_start=1 FT /gene="C15orf29" FT /product="chromosome 15 open reading frame 29" FT /db_xref="GOA:Q9H079" FT /db_xref="HGNC:26199" FT /db_xref="UniProtKB/Swiss-Prot:Q9H079" FT /protein_id="AAH26234.1" FT /translation="MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPK FT QLAAYINRTVGQTVKSPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENEL FT ACAGHLPEKLHHDSRTYLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNM FT RLNVALTFWRKRSISELVAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPL FT VKSLLKSKFEEYVIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENH FT LTLVPGYTGNIAKDVDAYLLQLH" FT misc_difference 1038^1039 FT /gene="C15orf29" FT /note="1 base in the human genome, A, is not found in FT cDNA." FT misc_difference 1906..1936 FT /gene="C15orf29" FT /note="polyA tail: 31 bases do not align to the human FT genome." XX SQ Sequence 1936 BP; 691 A; 299 C; 343 G; 603 T; 0 other; gaggctgggc tgaggcgccg cggtaccatg aggcgccggt acttaagaga ttatggcatc 60 agaaacccac aatgttaaaa aacggaactt ttgtaataag attgaggatc atttcattga 120 tcttcctaga aaaaagatct ctaatttcac taataagaac atgaaggagg ttaagaaatc 180 tccaaaacag ttggctgctt acataaatag aacagttgga caaactgtga aaagcccaga 240 taaacttcgt aaagtgatct atcgcagaaa gaaagttcat catccctttc caaatccttg 300 ttacagaaaa aaacagtccc ctggaagtgg gggctgtgac atggcaaata aagaaaatga 360 actggcttgt gcaggccacc tgcctgaaaa attacaccat gatagtcgaa catatttggt 420 taactccagt gattctggtt cttcacagac agaaagccca tcatcaaaat atagtgggtt 480 tttttctgag gtttctcagg accatgaaac aatggcccaa gttttgttca gcaggaatat 540 gagattgaat gtagctttaa ctttctggag aaagagaagt ataagtgaac ttgtagctta 600 tttgttgagg atagaagatc ttggcgttgt ggtagattgc cttcctgtgc tcaccaattg 660 tttacaggaa gaaaaacaat atatctcact tggctgctgt gttgacttgt tgcctctagt 720 aaagtcacta cttaaaagca aatttgaaga atatgttata gttggtttaa actggcttca 780 agcagtcatt aaaaggtggt ggtcagaact atcatccaaa acagaaatta taaatgatgg 840 aaatattcaa attttaaaac aacaattaag tggattatgg gaacaggaaa accatcttac 900 tttggttcca ggatatactg gtaatatagc taaggatgta gatgcttatt tattacagtt 960 acattgagag atttcatcta ctaaagagca tttggttttt caaaacatcc ctgaactgta 1020 taatttacaa aaaaaaaagt ctcgtctgag aactgtgaac tgtggaagaa atcaaaacta 1080 ttttttcttt taaaaagcca cgtaatgaaa ccactaatga aatcccagca atctgcttca 1140 cattgaagtg gaaaaatatc caaaaggagc agcttcaatt tcattgaggt gaaagtgcac 1200 tatgaagatt gttcaccttt gctgcatttg ggagttatat ggttatttgg taacattaag 1260 aactactgga ttttaatgca atcctgcata aaaatataat ttatactatg tgaaaaaata 1320 agacaggact taccactagg aaccaccaag accaatcatc attaactttt ttaagattgt 1380 gttttattaa aaaaaaaaaa cacttaaatg tgtgcagcta ttttcttatg ttgaaaagac 1440 tgaaagttta aaacatgaaa aaaatcaata ttaaacattt tttgttcaca ctgagatact 1500 gtgtatgtaa aatgccttaa ttattaataa gccaatgtgt tatgatacca atatctgttt 1560 taaaaaacta aaaccaacca tgcttctggc atgataaaat catggaatta aatcaggggt 1620 ttacattctt gtagagtgtt cttgaaacac tctctgcacc atttttaaaa cttgagaata 1680 gttttagtat ctctgatatt ttttgccaga atcatcatgt catgtatgaa tgtgttatcc 1740 ctatctaagg aaaaaggtga atatgttttt gtatgaatgt ttaactggaa atgtccatgg 1800 acttggctaa tttatattta ctttttattg tacatagatt tctaatattt ttcattcctg 1860 tatcatttaa acttccttca tttgagtaaa ttcactaaat atttcgaaaa aaaaaaaaaa 1920 aaaaaaaaaa aaaaaa 1936 // |
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