spacer
spacer

EBI Dbfetch

ID   BC022265; SV 2; linear; mRNA; STD; HUM; 1674 BP.
XX
AC   BC022265;
XX
DT   06-FEB-2002 (Rel. 70, Created)
DT   16-JUL-2006 (Rel. 88, Last updated, Version 10)
XX
DE   Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor alpha,
DE   mRNA (cDNA clone MGC:22322 IMAGE:4288676), complete cds.
XX
KW   MGC.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1674
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-1674
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (01-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
XX
DR   ASTD; TRAN00000077391.
DR   H-InvDB; HIT000039438.
DR   ImaGenes; IMAGp958L211128Q.
DR   ImaGenes; IRALp962A0636Q.
DR   ImaGenes; IRAUp969H0784D.
XX
CC   On Sep 16, 2003 this sequence version replaced gi:18490131.
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: CLONTECH
CC   cDNA Library Preparation: CLONTECH Laboratories, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Sequencing Group at the Stanford Human Genome
CC   Center, Stanford University School of Medicine, Stanford, CA  94305
CC   Web site:       http://www-shgc.stanford.edu
CC   Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
CC   Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
CC   R. M.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAL Plate: 36 Row: a Column: 6
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 32483385.
CC   Differences found between this sequence and the human reference
CC   genome (build 36) are described in misc_difference features below.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1674
FT                   /organism="Homo sapiens"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_81"
FT                   /clone="MGC:22322 IMAGE:4288676"
FT                   /tissue_type="Skeletal Muscle"
FT                   /note="Vector: pDNR-LIB"
FT                   /db_xref="taxon:9606"
FT   gene            1..1674
FT                   /gene="PKIA"
FT   CDS             27..257
FT                   /codon_start=1
FT                   /gene="PKIA"
FT                   /product="protein kinase (cAMP-dependent, catalytic)
FT                   inhibitor alpha"
FT                   /db_xref="GDB:433263"
FT                   /db_xref="GOA:P61925"
FT                   /db_xref="HGNC:9017"
FT                   /db_xref="InterPro:IPR004171"
FT                   /db_xref="PDB:1CMK"
FT                   /db_xref="PDB:1JLU"
FT                   /db_xref="PDB:1Q8T"
FT                   /db_xref="PDB:1VEB"
FT                   /db_xref="PDB:1XH4"
FT                   /db_xref="PDB:1XH5"
FT                   /db_xref="PDB:1XH6"
FT                   /db_xref="PDB:1XH7"
FT                   /db_xref="PDB:1XH8"
FT                   /db_xref="PDB:1XH9"
FT                   /db_xref="PDB:1XHA"
FT                   /db_xref="PDB:1YDR"
FT                   /db_xref="PDB:2C1A"
FT                   /db_xref="PDB:2C1B"
FT                   /db_xref="PDB:2F7E"
FT                   /db_xref="PDB:2GNI"
FT                   /db_xref="PDB:2JDS"
FT                   /db_xref="PDB:2JDT"
FT                   /db_xref="PDB:2JDV"
FT                   /db_xref="PDB:2UVX"
FT                   /db_xref="PDB:2UVY"
FT                   /db_xref="PDB:2UVZ"
FT                   /db_xref="PDB:2UW0"
FT                   /db_xref="PDB:2UW3"
FT                   /db_xref="PDB:2UW4"
FT                   /db_xref="PDB:2UW5"
FT                   /db_xref="PDB:2UW6"
FT                   /db_xref="PDB:2UW7"
FT                   /db_xref="PDB:2UW8"
FT                   /db_xref="PDB:2VNW"
FT                   /db_xref="PDB:2VNY"
FT                   /db_xref="PDB:2VO0"
FT                   /db_xref="PDB:2VO3"
FT                   /db_xref="PDB:2VO6"
FT                   /db_xref="PDB:2VO7"
FT                   /db_xref="UniProtKB/Swiss-Prot:P61925"
FT                   /protein_id="AAH22265.1"
FT                   /translation="MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGL
FT                   DINKTEGEEDAQRSSTEQSGEAQGEAAKSES"
FT   misc_difference 1647..1674
FT                   /gene="PKIA"
FT                   /note="polyA tail: 28 bases do not align to the human
FT                   genome."
XX
SQ   Sequence 1674 BP; 527 A; 289 C; 319 G; 539 T; 0 other;
     ccctgctatg tggatatttg gtagcaatga ctgatgtgga aactacatat gcagatttta        60
     ttgcttcagg aagaacaggt agaagaaatg caatacatga tatcctggtt tcctctgcaa       120
     gtggcaacag caatgaatta gccttgaaat tagcaggtct tgatatcaac aagacagaag       180
     gtgaagaaga tgcacaacga agttctacag aacaaagtgg ggaagcccag ggagaagcag       240
     caaaatctga aagctaacac cccactttga ccctcgacca cacctgaaaa tgtctcaaat       300
     ctccaggagt atctggaatg catttgtttc catgagtgaa aagaggaaaa agaaaatggc       360
     tgtgctgcat tgcaggaacc tgctcattat catgttaaaa atgagggcag aggctgtggc       420
     tgcaggcaga cttttcccta cctctgtcat tagcaatggt tgaaatcatg tggcttgtgt       480
     ttgggcgtca tttttgtatg gatcctttca cttgatcata tgacgaaatg cttatagaga       540
     gtagctccga cctagatgat gattcttcct gtagcatctg gcccctcaca atgtcagagg       600
     atttaattgt gtctaattgc gaagggttga ttgaacccca gagtttaaat atctctggct       660
     caagtgttca cccagtaaaa gaaagatcca gaaagcactg tttttagcat tacgtatctg       720
     tgtgttactg ctgtgttatt tacactgttt tgtattgtac aatatatatg ctcagcactg       780
     cccccttctc tgattgctta tgaaaaacaa aatgatgtac attactgtga atttttatac       840
     cactcatttt taaaagggct gtcttttcat tttagttttc catactgtgg tggtgtacac       900
     aggatagaac accctttttt aaaacacagt ctttcccctt gctcattgta tgttgatgag       960
     ttgattaagt ctaacagatt catcaagact ccattgcttt attatagaga catttgaaaa      1020
     tatccattaa tgtgaatatc acctgaattc agtctgtttg gtgtctgcac agactggaat      1080
     tcaatctgtc aaatttgttt tattctcaag tggagaactt ctcccacata atatatatat      1140
     atatatatat tttaatttat gagaattttg gacaattgga aaggtagaaa agaaaagcca      1200
     agatcatact aaggactgga aatattttgt tctatggaat caaatttctc acaatgctgt      1260
     atgatactat ttaaatttgg aggacaactt atcttcacta agctgaatca ggtggagaaa      1320
     gtaatctcct tgcaatcatg tggacaccaa tcacaaaagt aaagccctgg tgttgtgttt      1380
     tcatgtcttt tttcagccct ctcagatcca aatgttatta tgcacttttt aatgtttgta      1440
     aacttttact aataattagt gtgaattgca ttctgataca ataatgatta tcattagaag      1500
     ctaacaaaat tctcattaat actgtgtttg atggcctctg ctgtgtttta acatcgtgct      1560
     tcttatatgg aaagtttttg tgagctgtgt aatccctctg gtcagtatta tgaaatcatt      1620
     tgtcagtggt aataaataag gaaccaaaaa aaaaaaaaaa aaaaaaaaaa aaaa            1674
//


  
spacer
spacer