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EBI DbfetchID BC016265; SV 1; linear; mRNA; STD; MUS; 1410 BP. XX AC BC016265; XX DT 13-NOV-2001 (Rel. 69, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 13) XX DE Mus musculus ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast), DE mRNA (cDNA clone MGC:28917 IMAGE:4923869), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-1410 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1410 RG NIH MGC Project RA ; RT ; RL Submitted (29-OCT-2001) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ImaGenes; IMAGp998O0610845Q. DR ImaGenes; IRAKp961P1938Q. DR ImaGenes; IRAVp968G0337D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Jeffrey E. Green, M.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 38 Row: p Column: 19 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 21450232. CC Differences found between this sequence and the mouse C57BL/6J CC genome (build 36) are described in misc_difference features below. XX FH Key Location/Qualifiers FH FT source 1..1410 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /strain="FVB/N" FT /mol_type="mRNA" FT /clone_lib="NCI_CGAP_SG2" FT /clone="MGC:28917 IMAGE:4923869" FT /tissue_type="Salivary gland, 10 week old female mouse" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:10090" FT gene 1..1410 FT /gene="Ube2e2" FT /note="synonym: MGC28917" FT CDS 52..657 FT /codon_start=1 FT /gene="Ube2e2" FT /product="ubiquitin-conjugating enzyme E2E 2 (UBC4/5 FT homolog, yeast)" FT /db_xref="GOA:Q91W82" FT /db_xref="InterPro:IPR000608" FT /db_xref="InterPro:IPR016135" FT /db_xref="MGI:2384997" FT /db_xref="UniProtKB/Swiss-Prot:Q91W82" FT /protein_id="AAH16265.1" FT /translation="MSTEAQRVDDSPSTSGGSSDGDQRESVQQEPDREQVQPKKKEGKI FT SSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVF FT FLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSL FT LTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT" FT misc_difference 1375..1410 FT /gene="Ube2e2" FT /note="polyA tail: 36 bases do not align to the mouse FT genome." XX SQ Sequence 1410 BP; 372 A; 327 C; 317 G; 394 T; 0 other; ctcggcgtcg gagccgcggc tggagcgcgg gcgacgccgc gaggatctaa gatgtccact 60 gaggcgcaga gagttgatga cagtccaagc actagtggag gaagttctga tggagatcag 120 cgggagagcg ttcagcagga acctgatcga gaacaagttc agcctaagaa aaaggagggg 180 aagatatcca gcaagacagc cgcgaaactg tcaaccagtg ccaaaagaat tcagaaggag 240 cttgcagaaa tcacgctgga tccccctccc aactgtagtg ctggacccaa aggagacaac 300 atttatgaat ggaggtcaac tatattggga cccccaggat ctgtctatga aggaggggta 360 ttctttcttg acattacctt ttcaccagat tatccgttta aaccccctaa ggtcaccttc 420 cgaacgagaa tctatcactg taatatcaac agccagggtg taatctgtct ggacatcctc 480 aaggacaact ggagtccggc cctgaccatc tctaaagtcc tcctgtccat ctgctcacta 540 cttacagact gcaaccctgc cgaccctctg gtgggcagta ttgccacaca gtacatgacc 600 aacagagcgg agcatgaccg gatggccaga cagtggacca agcggtacgc cacctagggg 660 cctgcgtgtg ccagctgtgt gccagcacat tcaccaagtg catcagtacc cacctgctcc 720 tgcagccctc cgttctgtcg cctgttgtta ttacatttta aactgtttgg ggatggtatg 780 tcatctgtcc ctcctccttc ctaccgccac ctcctcccct tctctctgtc cctctttttc 840 cttttattcc attttcggtt tctgttaact tgaaagattt gggattcccc cactgcagtg 900 tggatgggag tttctgtttt aagtacaaac catgttggag ctatactagt aagacctttc 960 atacagagct ttgtgttact gtgtggtttg ggtttttgtt gttgttgttt gttttatctt 1020 ttttttttct tttatgtgct cttcggggaa aacaaacatt caggagtata tctcgtttat 1080 acttaaatgt agtgcttagg gttaattttt tgtactgaag tctattggtg ggtgcatgct 1140 actgggaaca aggttttgta caaaaggtcc aatcagaatc actgtgcatt actgagaccc 1200 tgtcacaagc cttctgtccc ccacacagaa gactgtcaga ttgaacaaaa taatatgtat 1260 tttgatttac ttaagtgctt gtaaatttct tagggacctg ccacttttga ctgtggatca 1320 gttgatgtat acttgtatta ttaatgcctc aataaatcac tgtggcggat caataaaaaa 1380 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1410 // |
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