EBI Dbfetch

ID   BC003437; SV 1; linear; mRNA; STD; MUS; 1548 BP.
XX
AC   BC003437;
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DT   09-MAR-2001 (Rel. 67, Created)
DT   24-SEP-2008 (Rel. 97, Last updated, Version 13)
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DE   Mus musculus ADP-ribosylarginine hydrolase, mRNA (cDNA clone MGC:6488
DE   IMAGE:2647247), complete cds.
XX
KW   MGC.
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OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
XX
RN   [1]
RP   1-1548
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-1548
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (20-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
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DR   ASTD; TRAN00000186384.
DR   Ensembl-Gn; ENSMUSG00000002844; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000002923; Mus_musculus.
DR   ImaGenes; IMAGp998C246606Q.
DR   ImaGenes; IRAKp961I195Q.
DR   ImaGenes; IRAVp968B021D.
DR   ImaGenes; IRAVp968C031Q.
XX
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Gilbert Smith, Ph.D.
CC   cDNA Library Preparation: Life Technologies, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Baylor College of Medicine Human Genome
CC   Sequencing Center
CC   Center code: BCM-HGSC
CC   Web site: http://www.hgsc.bcm.tmc.edu/cdna/
CC   Contact: amg@bcm.tmc.edu
CC   Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
CC   Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
CC   A.N., Gibbs, R.A.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 5 Row: i Column: 19
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 31542112.
CC   Differences found between this sequence and the mouse C57BL/6J
CC   genome (build 36) are described in misc_difference features below.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1548
FT                   /organism="Mus musculus"
FT                   /lab_host="DH10B"
FT                   /strain="FVB/N"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NCI_CGAP_Mam1"
FT                   /clone="MGC:6488 IMAGE:2647247"
FT                   /tissue_type="Mammary tumor. Metallothionien-TGF alpha
FT                   model. 10 month old virgin mouse. Taken by biopsy."
FT                   /note="Vector: pCMV-SPORT6"
FT                   /db_xref="taxon:10090"
FT   gene            1..1548
FT                   /gene="Adprh"
FT                   /note="synonym: Arh1"
FT   CDS             162..1250
FT                   /codon_start=1
FT                   /gene="Adprh"
FT                   /product="ADP-ribosylarginine hydrolase"
FT                   /db_xref="GOA:P54923"
FT                   /db_xref="InterPro:IPR005502"
FT                   /db_xref="MGI:1098234"
FT                   /db_xref="UniProtKB/Swiss-Prot:P54923"
FT                   /protein_id="AAH03437.1"
FT                   /translation="MGGGLIERYVAAMVLSAAGDTLGYFNGKWEFIRDGETIHQQLAQM
FT                   GDLEAIDVARWRVSDDTVMHLATAEALMEAGQSPDLPRLYSLLAKHYRDCMGDMDGRAP
FT                   GGACMQNAMLLQPNRADGYRIPFNSHEGGCGAAMRAMCIGLRFPHPSQLDLLIQVSIES
FT                   GRMTHHHPTGYLGSLASALFTAYAVNGKSPWQWGKGLMEVLPEAKKYITQSGYFVKENL
FT                   QHWSYFEKEWEKYLELRGILDGNSAPVFPQPFGVKERDQFYIDVSYSGWGGSSGHDAPM
FT                   IAYDALLAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVNPANYEKLEYRQ
FT                   RLEEAGRALYSLGSKEDPVLDP"
FT   misc_difference 1537..1548
FT                   /gene="Adprh"
FT                   /note="polyA tail: 12 bases do not align to the mouse
FT                   genome."
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SQ   Sequence 1548 BP; 336 A; 423 C; 437 G; 352 T; 0 other;
     ggcttgggtg cccacagcag gactcctgcg cccggtaccc cgcctccagc tcgggcaatc        60
     ctgccctcgg ctctggacca ccccgatccc gccccacgct ctcagctccg cctcagcagg       120
     agtctccgtt gccccataag cccgcctgtg ccaagctcag catgggtggg gggctgattg       180
     agaggtatgt ggctgccatg gtgctgagcg cggctggaga taccttgggc tacttcaacg       240
     ggaagtggga gttcattcgg gatggggaga cgatacacca gcagttggcc cagatgggtg       300
     acttggaagc catagatgtg gcacgatgga gagtcagtga tgataccgtc atgcacctgg       360
     ccacagcgga ggccctcatg gaagccggcc agtccccgga tttgcctcgg ctgtattccc       420
     tactagccaa acattaccgg gactgcatgg gagacatgga tggccgggca ccaggtggtg       480
     cttgcatgca gaacgccatg ctgctacagc ccaacagggc cgacggctat aggattccct       540
     tcaacagtca cgagggtggc tgcggggctg ccatgcgcgc catgtgcatc gggctgaggt       600
     tcccccaccc cagccaactg gatctgctga tccaagtgag catcgagagc ggccggatga       660
     cccaccacca ccccacgggc tacctcggca gccttgcgtc cgctcttttt acggcatatg       720
     ccgtgaatgg caagtcacca tggcagtggg gaaaagggct aatggaggtg ctgcctgaag       780
     ccaaaaagta catcactcag tcaggctact ttgtgaagga gaatcttcaa cactggtcct       840
     acttcgagaa agaatgggaa aagtacctgg agcttagagg aattttggac ggcaactcgg       900
     ctcccgtctt cccgcagccc tttggtgtga aggaaaggga tcagttctac atcgacgtga       960
     gctactcggg ctggggtggc agcagcggac acgatgcccc catgattgcc tacgatgccc      1020
     tcctggccgc gggggattcc tggaaggagc tcgcacacag agccttcttc cacggtggag      1080
     acagtgattc cacggccgcc attgctggct gctggtgggg agttatgtac ggctttaaag      1140
     gcgtaaatcc cgccaactac gagaagctcg aataccgaca gcggctagaa gaggccggaa      1200
     gagctttgta ttctctcggg tcaaaagaag accctgtatt agatccctag ggagaaggtg      1260
     gtttgtttct ggcggtttct ttccctgtag ccctgaagct cagtctcttc agccttttga      1320
     gagtcaagaa tcctaatttt gtgtttgaag agttctgaga taacaagtcc cttggatgcg      1380
     tttagccctg cctttccaca tttaccctgt tctccccgag ttcctctctt gtgtatgaga      1440
     atctttttat ttcagttgat ggggtcagct tttcccattc agaaacctca taaccttgta      1500
     ttccagtttt tgtttttatc acagaattgt gcaaaaaaaa aaaaaaaa                   1548
//