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EBI DbfetchID BC000370; SV 2; linear; mRNA; STD; HUM; 1445 BP. XX AC BC000370; XX DT 09-MAR-2001 (Rel. 67, Created) DT 15-OCT-2008 (Rel. 97, Last updated, Version 10) XX DE Homo sapiens dual specificity phosphatase 14, mRNA (cDNA clone MGC:8337 DE IMAGE:2819474), complete cds. XX KW MGC. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1445 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1445 RG NIH MGC Project RA ; RT ; RL Submitted (15-NOV-2000) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000049367. DR ASTD; TRAN00000049368. DR ASTD; TRAN00000049369. DR H-InvDB; HIT000029560. DR ImaGenes; IMAGp958L031Q. DR ImaGenes; IRALp962A161Q. DR ImaGenes; IRALp962K019Q. DR ImaGenes; IRAUp969A101D. DR ImaGenes; IRAUp969B0129D. DR ImaGenes; IRAZp975A042D. DR ImaGenes; IRAZp975A081Q. XX CC On Aug 19, 2003 this sequence version replaced gi:12653204. CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: DCTD/DTP CC cDNA Library Preparation: Rubin Laboratory CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAL Plate: 1 Row: a Column: 16 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 50428923. CC Differences found between this sequence and the human reference CC genome (build 36) are described in misc_difference features below CC and these differences were also compared to chimpanzee genomic CC sequences available as of 09/15/2004. XX FH Key Location/Qualifiers FH FT source 1..1445 FT /organism="Homo sapiens" FT /lab_host="DH10B-R" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_7" FT /clone="MGC:8337 IMAGE:2819474" FT /tissue_type="Lung, small cell carcinoma" FT /note="Vector: pOTB7" FT /db_xref="taxon:9606" FT gene 1..1445 FT /gene="DUSP14" FT /note="synonyms: MKP6, MKP-L" FT misc_difference 1..20 FT /gene="DUSP14" FT /note="20 bases at the 5' end do not align to the human FT genome." FT misc_difference 24 FT /gene="DUSP14" FT /note="'C' in cDNA is 'A' in the human genome. The FT chimpanzee genome agrees with the cDNA sequence, suggesting FT that this difference is unlikely to be due to an artifact." FT CDS 206..802 FT /codon_start=1 FT /gene="DUSP14" FT /product="dual specificity phosphatase 14" FT /db_xref="GOA:O95147" FT /db_xref="HGNC:17007" FT /db_xref="HSSP:1M3G" FT /db_xref="InterPro:IPR016130" FT /db_xref="UniProtKB/Swiss-Prot:O95147" FT /protein_id="AAH00370.1" FT /translation="MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRGSVASNR FT HLLQARGITCIVNATIEIPNFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKH FT GATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYER FT QLFGKSTVKMVQTPYGIVPDVYEKESRHLMPYWGI" FT misc_difference 1231^1232 FT /gene="DUSP14" FT /note="1 base in the human genome, A, is not found in cDNA. FT The chimpanzee genome agrees with the cDNA sequence, FT suggesting that this difference is unlikely to be due to an FT artifact." FT misc_difference 1429..1445 FT /gene="DUSP14" FT /note="polyA tail: 17 bases do not align to the human FT genome." XX SQ Sequence 1445 BP; 357 A; 365 C; 336 G; 387 T; 0 other; ccgcaacccg cgccgcgccg cgccgatttg atttgtatcc actgtcacca gcactgctca 60 cttaggactt tctggatccg gacccaggca gcgcacactg gactcttgag gaagaaggag 120 actctaattt tggattcctt ggtggaggaa aataaaacac tctggtcttg ccgccaacga 180 tgcaagtgtg actgctggcg tcttcatgag ctccagaggt cacagcacgc taccaaggac 240 tctcatggcc cctcggatga tttccgaggg agacatagga ggcattgctc aaatcacctc 300 ctctctattc ctgggcagag gcagtgtggc ctccaatcgg cacctcctcc aggctcgtgg 360 catcacctgc attgttaatg ctaccattga gatccctaat ttcaactggc cccaatttga 420 gtatgttaaa gtgcctctgg ctgacatgcc gcatgccccc attggactgt actttgacac 480 cgtggctgac aagatccaca gtgtgagcag gaagcacggg gccaccttgg tgcactgtgc 540 tgcaggggtg agccgctcag ccacgctgtg tatcgcgtac ctgatgaaat tccacaacgt 600 gtgcctgctg gaggcgtaca actgggtgaa agcccggcga cctgtcatca ggcccaacgt 660 aggcttctgg aggcaactga tagactacga gcgccagctc tttgggaagt cgacagttaa 720 aatggtacag acaccttatg gcatagttcc cgacgtctat gagaaggagt cccgacacct 780 gatgccttac tgggggattt agtgccactg aagcctgcgt cagcagcccg agcggggccg 840 gcatctgctc cccgccgtct gctccctctc cactctcttc tcaaatggct gacttctggt 900 tctccctcaa gtgtttttta cactgggtgt tcaaatttat tttaagagat agggagggag 960 gggacataaa gggaatgcat acattgctag tcacattttt aaaattaaca ttttggaata 1020 gtgtttatgg aaatctttag cttttaatca tttttaccaa tttgaacagt ttaataaact 1080 ggttctgctc tcttctgaat ctcatgcctt tggcaccttg gtaggtgcag gaggagctca 1140 gtgcaaaaat cactttgggg cctcattaac cctttagaga caagctttgc cccaggctgc 1200 ggaccagaca gatgcttagg gaaggttgat accagcttca gtctctactg gattagccct 1260 actctttcct ttcccctcca ttatttagtg actctgtaag taagttaaat acacccttat 1320 tatttagctg ttaagtaact ataatgaaat ctgctgcaaa atctctcttg gaatccatgt 1380 gcccaggatt atattagcat tatttttaat aaatctatat gcttaacaaa aaaaaaaaaa 1440 aaaaa 1445 // |
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