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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY924810; SV 1; linear; mRNA; STD; PLN; 1086 BP.
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AC   AY924810;
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DT   13-MAR-2005 (Rel. 83, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Arabidopsis thaliana hypothetical protein (At4g01770) mRNA, complete cds.
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KW   .
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1086
RA   Underwood B.A., Xiao Y., Moskal W., Monaghan E., Wang W., Redman J.,
RA   Wu H.C., Utterback T., Town C.D.;
RT   ;
RL   Submitted (08-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Plant Genomics, The Institute for Genomic Research, 9712 Medical Center
RL   Drive, Rockville, Maryland 20850, USA
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DR   EMBL-TPA; BK005829.
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CC   This clone is in the Gateway(TM) pENTR221 recombination vector and
CC   has been donated to the Arabidopsis Biological Resource Center. The
CC   cloned open reading frame is based on experimental evidence from 5'
CC   and 3' RACE products. ORFs that were experimentally verified to be
CC   contained in one exon were cloned by PCR from genomic DNA. ORFs
CC   that spanned more than one exon were cloned by PCR from cDNA pools.
CC   Shine-Dalgarno and Kozak consensus sequences for protein expression
CC   are included between the attL1 site and the start codon. The open
CC   reading frame is in frame with the attL1 sequence and contains a
CC   stop codon.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="pENTR221-At4g01770"
FT                   /db_xref="taxon:3702"
FT   gene            1..1086
FT                   /locus_tag="At4g01770"
FT   CDS             1..1086
FT                   /codon_start=1
FT                   /locus_tag="At4g01770"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q9ZSJ2"
FT                   /db_xref="InterPro:IPR003388"
FT                   /db_xref="UniProtKB/TrEMBL:Q9ZSJ2"
FT                   /protein_id="AAX23885.1"
FT                   /translation="MEQKQHILKQSTFSSSPSSYSSISDRPISLLSRNGLLLLLLALVL
FT                   LLGVLLPWPGSPLFLFPNRLSSSLSPSPQSKWRDYTLAQAARFVAKNGTVIVCAVSSPF
FT                   LPFLNNWLISVSRQKHQDKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAFSFGSQ
FT                   GFFNFTARRPQHLLQILELGYNVMYNDVDMVWLQDPFLYLEGSHDAYFTDDMPQIKPLN
FT                   HSHDLPHPDRNGETYICSCMIYLRPTNGAKLLMKKWSEELQSQAWSESIRFKANDQPAF
FT                   NLALNKTAHQVDLYLLSQVAFPTGGLYFKNEAWVQETKGKHVIVHNNYIIGYDRKMKRF
FT                   QDYGLWLVDDHALESPLGKLE"
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SQ   Sequence 1086 BP; 281 A; 269 C; 216 G; 320 T; 0 other;
     atggagcaga aacaacatat tcttaaacaa agtacattct cttcctctcc tagttcttat        60
     tcttcaatct cagaccgtcc catctctctc cttagccgca acggtctcct ccttctcctt       120
     ctcgctctcg tcctgctcct cggtgtactc ttgccctggc caggatctcc cttattcctg       180
     tttccaaata gactttcttc ttctttgtca ccgtctccgc agtccaaatg gcgcgactat       240
     acccttgctc aggcggctag gttcgtggcc aagaatggca ctgtgatagt ctgcgccgtg       300
     agctcaccat tcttgccttt tctcaacaac tggttgatta gtgtttctag acaaaagcat       360
     caagacaaag tcctcgtgat cgctgaggat tacattactc tgtataaagt caacgagaag       420
     tggcctggcc acgccgttct tattcctcca gcgctcgatt ctaaaaccgc attcagtttc       480
     ggttcccagg gtttcttcaa tttcacagct cgaaggccgc aacatctctt gcaaattttg       540
     gagctaggtt acaatgttat gtacaacgat gttgatatgg tttggttgca agatccattt       600
     ctgtatttgg agggaagcca tgacgcgtat ttcaccgatg acatgcctca aataaagcct       660
     ttgaatcact ctcatgattt accacatccg gatcgaaacg gagagactta tatatgtagc       720
     tgcatgattt acttgcgacc tacgaatggt gcaaagcttc taatgaagaa atggagtgag       780
     gaacttcaat cccaagcttg gtctgaatcc atccgtttta aagcaaatga tcagcctgct       840
     tttaacttgg cacttaacaa aacagctcat caagtggatc tctacttgct ttctcaagta       900
     gctttcccaa caggaggatt gtacttcaag aacgaggcat gggttcaaga gacaaagggg       960
     aaacatgtca tagtccacaa taactacatt atcggttacg acaggaaaat gaaacgtttc      1020
     caagattacg gtctatggct tgtcgatgat cacgctcttg agtctccatt agggaaatta      1080
     gagtaa                                                                 1086
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