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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY840087; SV 1; linear; genomic DNA; STD; PRO; 1290 BP.
XX
AC   AY840087;
XX
DT   20-DEC-2004 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Halobacterium salinarum glutamate dehydrogenase B (gdhB) gene, complete
DE   cds.
XX
KW   .
XX
OS   Halobacterium salinarum
OC   Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
OC   Halobacterium.
XX
RN   [1]
RP   1-1290
RX   DOI; 10.1016/j.gene.2005.01.011
RX   PUBMED; 15780999.
RA   Ingoldsby L.M., Geoghegan K.F., Hayden B.M., Engel P.C.;
RT   "The discovery of four distinct glutamate dehydrogenase genes in a strain
RT   of Halobacterium salinarum";
RL   Gene 349:237-244(2005).
XX
RN   [2]
RP   1-1290
RA   Ingoldsby L.M.;
RT   ;
RL   Submitted (26-NOV-2004) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, Conway Institute of Biomolecular and Biomedical Research,
RL   University College Dublin, Dublin 4, Ireland
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1290
FT                   /organism="Halobacterium salinarum"
FT                   /strain="NRC-36014"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:2242"
FT   gene            1..1290
FT                   /gene="gdhB"
FT   CDS             1..1290
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="gdhB"
FT                   /product="glutamate dehydrogenase B"
FT                   /function="amino acid metabolism"
FT                   /EC_number="1.4.1.-"
FT                   /db_xref="GOA:Q9HSM4"
FT                   /db_xref="InterPro:IPR006095"
FT                   /db_xref="InterPro:IPR006096"
FT                   /db_xref="InterPro:IPR006097"
FT                   /db_xref="InterPro:IPR014362"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9HSM4"
FT                   /protein_id="AAW19067.1"
FT                   /translation="MAQTPPPESAPSTDSEPETALETARRQLQAAAEHVDIADGVIERL
FT                   THPTRVVQVSVPVERDDGTVTVYDGYRAQHDDVRGPYKGGLRYHPGVSAEECVGLSMWM
FT                   TWKCAVMDLPFGGAKGGVVVDPKTLSADEHERLTRRFAAELRDEVGPSQDIPAPDMGTD
FT                   AQTMAWFMDAYSMQQGETVPGVVTGKPPVAGGSHGRAEAPGRSVAIATREAINYYDIPI
FT                   DDATVAVQGYGSVGANAALLLDDWGARVVAVSDVNGGVLDTDGLDTHAIPSHGNQPAAV
FT                   MRHDAPNTLTNEELLELDVDVVIPAAVGNVITAANADRIQADIVVEGANGPTTSAADRI
FT                   LEERAVPVIPDILANAGGVTVSYFEWLQDINRRTWSPERVRDELESEMLSAWNAVRSEV
FT                   DDGDLSWRDAAYVVALQRIGRAKEARGLWP"
XX
SQ   Sequence 1290 BP; 242 A; 440 C; 432 G; 176 T; 0 other;
     atggcccaga caccaccgcc ggagtccgcg ccctccaccg acagcgagcc cgagaccgcc        60
     ctggagaccg cacgccgcca gctgcaggcg gctgccgagc acgtcgacat cgctgacggc       120
     gtgatcgagc gactcaccca ccctacgcgc gtggtccagg tatcggtgcc ggtcgagcgc       180
     gacgacggca ccgtcacggt atacgacggg taccgtgccc aacacgacga cgtacgcggt       240
     ccatacaaag gtgggctccg ctaccacccc ggtgtgagcg ccgaggaatg cgtcggcctc       300
     tcgatgtgga tgacttggaa gtgtgccgtc atggacctgc cgttcggcgg cgcgaaaggc       360
     ggcgtcgttg tcgatccgaa gaccctcagc gccgacgaac acgagcgact gacacggcgg       420
     ttcgcggcgg agctccgcga cgaggtcggt cccagccagg acatccccgc gccggacatg       480
     ggaaccgacg cacagacgat ggcctggttc atggacgcct acagcatgca acagggcgag       540
     actgtcccgg gcgtcgtcac cgggaagccg ccagttgccg gtgggagcca cggccgcgcg       600
     gaggcacccg gccggagcgt cgccatcgcc accagggaag cgatcaacta ctacgacatc       660
     cccatcgacg acgcgaccgt cgccgtccag ggatacggga gcgtcggagc gaacgctgca       720
     ctgctgctcg atgactgggg ggcacgcgtc gtcgccgtca gcgatgtcaa cggtggcgtc       780
     ctcgacactg atggcctcga tacacacgcg attccgtcgc acgggaacca gccggcggcg       840
     gtgatgcgac acgacgcgcc gaacacactc accaacgagg agctcctcga actagacgtc       900
     gatgtggtga tcccggctgc tgtcggaaac gtaatcaccg ctgccaacgc cgaccgcatt       960
     caggccgaca tcgtcgttga gggggccaac ggcccgacga catcggccgc cgaccgaatc      1020
     ctcgaggagc gcgccgtgcc cgtgatcccg gacatcctcg cgaacgccgg cggggttacg      1080
     gtgtcgtact tcgagtggct ccaggacatc aaccgccgga cgtggtcgcc ggagcgtgtt      1140
     cgcgacgaac tcgaatccga gatgctgtcc gcatggaacg ccgtgcgcag cgaggtggac      1200
     gacggagacc tgagctggcg ggacgctgcc tacgttgtcg cgctgcaacg catcggccgt      1260
     gcgaaggaag cccgtgggct ctggccctga                                       1290
//
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