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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY814785; SV 1; linear; mRNA; HTC; INV; 1404 BP.
XX
AC   AY814785;
XX
DT   26-FEB-2005 (Rel. 83, Created)
DT   23-JUN-2006 (Rel. 88, Last updated, Version 4)
XX
DE   Schistosoma japonicum SJCHGC09546 protein mRNA, complete cds.
XX
KW   HTC.
XX
OS   Schistosoma japonicum
OC   Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida;
OC   Schistosomatoidea; Schistosomatidae; Schistosoma.
XX
RN   [1]
RP   1-1404
RX   DOI; 10.1371/journal.ppat.0020029
RX   PUBMED; 16617374.
RA   Liu F., Lu J., Hu W., Wang S.Y., Cui S.J., Chi M., Yan Q., Wang X.R.,
RA   Song H.D., Xu X.N., Wang J.J., Zhang X.L., Zhang X., Wang Z.Q., Xue C.L.,
RA   Brindley P.J., McManus D.P., Yang P.Y., Feng Z., Chen Z., Han Z.G.;
RT   "New perspectives on host-parasite interplay by comparative transcriptomic
RT   and proteomic analyses of Schistosoma japonicum";
RL   PLoS Pathog. 2(4):E29-E29(2006).
XX
RN   [2]
RP   1-1404
RA   Han Z.;
RT   "The full-length cDNA sequences of Schistosoma japonicum genes";
RL   Unpublished.
XX
RN   [3]
RP   1-1404
RA   Han Z.;
RT   ;
RL   Submitted (02-NOV-2004) to the EMBL/GenBank/DDBJ databases.
RL   Functional Genomic Department, Chinese National Human Genome Center at
RL   Shanghai, 351 Guo Shoujing Road, Zhangjiang Hi-Tech Park, Pudong, Shanghai
RL   201203, P.R.China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1404
FT                   /organism="Schistosoma japonicum"
FT                   /mol_type="mRNA"
FT                   /clone="SJCHGC09546"
FT                   /db_xref="taxon:6182"
FT   CDS             489..1292
FT                   /codon_start=1
FT                   /product="SJCHGC09546 protein"
FT                   /note="similar to CAG07698 protein"
FT                   /db_xref="GOA:Q5DCD9"
FT                   /db_xref="InterPro:IPR007873"
FT                   /db_xref="UniProtKB/TrEMBL:Q5DCD9"
FT                   /protein_id="AAW26517.1"
FT                   /translation="MFLLSLGVSVKMNILLFLPAFLIVLVWHKGLLETIGHLCECFVVQ
FT                   LAVGTPFLFHNSWAYLSSAFNFSRQFMYKWTVNWRFLPESIFLDRQFHLILLIFHLCLL
FT                   LIFFVKFIRSRGGLWNYLCIFDPERNPKFDPAAVLYPMFVCNFVGVVVSRSLHYQFYIW
FT                   YFHTIPYLLWCVKSFSTPVKLLILGLIEISWNTYPSTIWSSGLLNLCHLTLLVGLIMGS
FT                   VPIKSISHCVKKESINNNSTHTPSKIHPHKKVSKPPRTGGKHKQA"
XX
SQ   Sequence 1404 BP; 376 A; 250 C; 266 G; 512 T; 0 other;
     gcagtcaatg aggttgtgga tctttatcag ctgatggggt tgtgaaaagt gtatgtgtac        60
     ccaaccactt acctcgtcgt acggtgttag atggtatacg gataagaagg aagaaaactt       120
     gtggtgttca gattaaaaca tgccagttca ttaaaccatg ttagtagata tagactatat       180
     ggataggatc tttacgatca atgactggag acactggata acgtggttca gaatcggtca       240
     cagtggcgta ggtacactcg ttcggtattt tctagatatt cagtttcatt atactttcat       300
     tcacagtgtt tcattcacca ttgttgagct ctattgtggt attcatcttg ttaatttgat       360
     ctcatgttta tgcggtatga taatttgggc tgatgcacgt gtgttatttt ctacgttgta       420
     catgatccat tatttgtaaa gtgttttgtt acatccaata tcattggctc cttattttta       480
     atgacatcat gtttctgctc agtcttggtg tttcggtgaa aatgaacata ttactgttcc       540
     ttcctgcctt cttaattgtt ttggtttggc acaagggact actagagaca ataggccatc       600
     tgtgtgaatg tttcgtcgta caactagccg tcggtacacc ctttctgttt cacaattcat       660
     gggcgtattt gagcagtgcg tttaacttca gtcgtcagtt tatgtataaa tggacagtca       720
     actggagatt tctcccggaa agtatatttt tggatagaca gtttcatttg attttactaa       780
     tatttcactt gtgtctgttg cttatattct tcgtgaagtt tattcgttct cgtggcggtt       840
     tgtggaatta tctctgtatt tttgatccgg aacgtaatcc aaaatttgat cctgccgctg       900
     tactataccc tatgttcgtg tgcaattttg ttggcgttgt tgtctctcgt tcattacatt       960
     accaattcta catttggtat tttcatacaa tcccatattt attatggtgt gttaaatcct      1020
     tttccacccc cgtaaagttg ttaatccttg gtcttattga aatcagttgg aacacttatc      1080
     catcaacaat ttggagcagt ggtttattaa atctatgcca ccttacacta cttgttggat      1140
     taattatggg atcggttcca attaaatcaa tttcccattg tgtcaaaaag gagtccatca      1200
     ataataactc gactcacact ccttcaaaaa ttcacccaca caagaaagtc tctaaaccac      1260
     cacgaactgg tggtaaacat aaacaagcct aaaagtttat ttttcgtatt ggtcagattg      1320
     tgaactgttg ctgtaacttt gctttgtatg tctattttgt tcacaaaata cgaaagaagt      1380
     atttgtaaaa aaaaaaaaaa aaaa                                             1404
//
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