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EBI Dbfetch

ID   AY814215; SV 1; linear; mRNA; HTC; INV; 2052 BP.
XX
AC   AY814215;
XX
DT   26-FEB-2005 (Rel. 83, Created)
DT   23-JUN-2006 (Rel. 88, Last updated, Version 4)
XX
DE   Schistosoma japonicum SJCHGC05972 protein mRNA, complete cds.
XX
KW   HTC.
XX
OS   Schistosoma japonicum
OC   Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida;
OC   Schistosomatoidea; Schistosomatidae; Schistosoma.
XX
RN   [1]
RP   1-2052
RX   DOI; 10.1371/journal.ppat.0020029
RX   PUBMED; 16617374.
RA   Liu F., Lu J., Hu W., Wang S.Y., Cui S.J., Chi M., Yan Q., Wang X.R.,
RA   Song H.D., Xu X.N., Wang J.J., Zhang X.L., Zhang X., Wang Z.Q., Xue C.L.,
RA   Brindley P.J., McManus D.P., Yang P.Y., Feng Z., Chen Z., Han Z.G.;
RT   "New perspectives on host-parasite interplay by comparative transcriptomic
RT   and proteomic analyses of Schistosoma japonicum";
RL   PLoS Pathog. 2(4):E29-E29(2006).
XX
RN   [2]
RP   1-2052
RA   Han Z.;
RT   "The full-length cDNA sequences of Schistosoma japonicum genes";
RL   Unpublished.
XX
RN   [3]
RP   1-2052
RA   Han Z.;
RT   ;
RL   Submitted (02-NOV-2004) to the EMBL/GenBank/DDBJ databases.
RL   Functional Genomic Department, Chinese National Human Genome Center at
RL   Shanghai, 351 Guo Shoujing Road, Zhangjiang Hi-Tech Park, Pudong, Shanghai
RL   201203, P.R.China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2052
FT                   /organism="Schistosoma japonicum"
FT                   /mol_type="mRNA"
FT                   /clone="SJCHGC05972"
FT                   /db_xref="taxon:6182"
FT   CDS             71..1567
FT                   /codon_start=1
FT                   /product="SJCHGC05972 protein"
FT                   /note="similar to beta-1,2-N-acetylglucosaminyltransferase
FT                   II"
FT                   /db_xref="GOA:Q5DE09"
FT                   /db_xref="InterPro:IPR007754"
FT                   /db_xref="UniProtKB/TrEMBL:Q5DE09"
FT                   /protein_id="AAW25947.1"
FT                   /translation="MRIKIRSLSTPIFLLNLSFICFRILTLSLSLLLILLVVNLLFTNF
FT                   WWFPESSTHERSNVLWLWKDTVLSYVTSSWLQSVRLQHPKNVAFDLKTAPPNSGPFSKL
FT                   LPLSLISNLRQYISNINRLQFVQNEDLYGQLPTRDNFTFITSPEHVIIVQVHNRSLELS
FT                   LLIESLRRTSGIEKALVIFSHDVYSDELNNLIGSIRFTRTAQIFYPHSIQIFPNSFPGT
FT                   DPRDCHSRINPAKASDTGCLNSDWPDTYQHYRESNFTQIKHHWLWKIEFVMNHFYPIKH
FT                   YKGYFILLEEDHFVVEDIFHVSTLISNKIWSPLNANGIVALGSYDKDNKYVSSVAEVTY
FT                   WLAPKHNMGMAVSRAVWRKIEDCLEQFCDYDDYNWDWSLQYVGQKCFPNKLKALTLPLS
FT                   TRVFHLGECRGLHHQKNVCSAELLATNIIQMFSGVVLTKLYPKDLHLSYKLPTVGPKQT
FT                   VNGGWSDPRDRNLCRSFLSNKWNDVLIQMAPTLIKYSPIY"
XX
SQ   Sequence 2052 BP; 643 A; 355 C; 312 G; 742 T; 0 other;
     gttttctgtt aacgtatacg taaagaagta ttacgtgaat tttgtcaaac gaacaactga        60
     catactggta atgcgcatca aaattaggtc cctctccaca cccattttcc tgctaaattt       120
     atccttcata tgcttccgga tactcactct ttctctctca ttgcttctaa tattactggt       180
     agtaaacctg ctttttacca acttctggtg gtttccagaa tcttcaacac acgagcgctc       240
     taatgttttg tggctttgga aggatacagt tttatcctat gtgacttcgt catggttgca       300
     gtcagtccgc cttcagcatc ctaaaaatgt agcttttgac ttaaaaacag caccaccaaa       360
     ttcaggtcca ttttctaagt tattacccct cagtttaatt tcaaatctgc gacagtacat       420
     ttcaaatatt aacagacttc aatttgtaca gaacgaagac ttgtatggtc aactaccaac       480
     gagagataac tttaccttca taacatctcc ggaacatgta ataatagtac aggttcataa       540
     tagatcttta gaattaagtc tactaattga atcactgcga cgtacaagcg gaattgaaaa       600
     agcacttgtt attttttcac atgatgtcta ttctgatgaa ttgaataatc ttattggatc       660
     tattcgattt actcgtactg ctcaaatttt ctatcctcat tcaattcaaa tctttccaaa       720
     ttcttttcct ggtactgatc caagagattg tcatagtaga ataaacccgg ctaaagctag       780
     tgatacagga tgcttaaatt ctgactggcc agacacatat caacactatc gcgaatcaaa       840
     ctttacacaa atcaagcatc attggctgtg gaagattgaa ttcgtaatga atcattttta       900
     tccaataaaa cattataagg gttattttat tttactagaa gaagatcatt ttgttgttga       960
     agatatattt catgtatcta ccttaattag taacaagatt tggagccctc taaatgccaa      1020
     tggaattgtc gcacttggat catacgataa agacaataaa tacgtttcct ctgtggcaga      1080
     agtaacttac tggcttgcac cgaaacacaa tatgggtatg gctgtctctc gtgctgtatg      1140
     gagaaaaatt gaagattgct tggaacaatt ctgtgattac gatgactaca attgggactg      1200
     gagtctacag tatgttggtc aaaaatgctt cccaaacaaa ctaaaggctc tgactctacc      1260
     tctttctact cgtgtctttc atttgggtga atgccgtggt ctgcatcatc agaaaaatgt      1320
     atgctcagca gaattactag caacaaatat tatacaaatg tttagtggag tagtattaac      1380
     taaattatat ccaaaagact tacatttatc atataaacta cctactgtag gtccaaaaca      1440
     aactgttaat ggtggttggt ctgatccacg tgatcgaaat ctttgtcgaa gtttcctatc      1500
     aaataaatgg aatgatgttc taatacagat ggctcctaca ttgataaaat attcacctat      1560
     ttattaggaa gatttattat acttgacaat ttactttatt ctgctacccg atatttcatc      1620
     cacttatttt tgttattgtt tgttctttat atctttaaaa ataaacacgg gttctttttt      1680
     ttgttggtta cttataactg aattgttgct agatattgtg ctttcaaact tattttagtt      1740
     aacataaatg cgagaatgca atcaaatgtt gtacatagat agaagaactg aacgtattta      1800
     ttctttgaaa tattcaaaag ttttattatt attattaagc tttgtttttt ttttttttca      1860
     agttatgtag cctggttagt aataaaatct attcgattca ttgtttctaa taattttaca      1920
     ctttgtttat aagaagtaat gacgaattat caattatctt agttacaaga ttttcgtaat      1980
     ttatttttgt taaataatta tagttatcat attcaatttt gttactttca aataaataat      2040
     taatgataca tt                                                          2052
//


  
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