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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY812621; SV 1; linear; mRNA; HTC; INV; 1234 BP.
XX
AC   AY812621;
XX
DT   13-MAR-2005 (Rel. 83, Created)
DT   23-JUN-2006 (Rel. 88, Last updated, Version 4)
XX
DE   Schistosoma japonicum SJCHGC02854 protein mRNA, partial cds.
XX
KW   HTC.
XX
OS   Schistosoma japonicum
OC   Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida;
OC   Schistosomatoidea; Schistosomatidae; Schistosoma.
XX
RN   [1]
RP   1-1234
RX   DOI; 10.1371/journal.ppat.0020029
RX   PUBMED; 16617374.
RA   Liu F., Lu J., Hu W., Wang S.Y., Cui S.J., Chi M., Yan Q., Wang X.R.,
RA   Song H.D., Xu X.N., Wang J.J., Zhang X.L., Zhang X., Wang Z.Q., Xue C.L.,
RA   Brindley P.J., McManus D.P., Yang P.Y., Feng Z., Chen Z., Han Z.G.;
RT   "New perspectives on host-parasite interplay by comparative transcriptomic
RT   and proteomic analyses of Schistosoma japonicum";
RL   PLoS Pathog. 2(4):E29-E29(2006).
XX
RN   [2]
RP   1-1234
RA   Liu F., Lu J., Hu W., Wang S.-Y., Cui S.-J., Chi M., Yan Q., Wang X.-R.,
RA   Song H.-D., Xu X.-N., Wang J.-J., Zhang X.-L., Wang Z.-Q., Xue C.-L.,
RA   Brindley P.J., McManus D.P., Yang P.-Y., Feng Z., Chen Z., Han Z.-G.;
RT   ;
RL   Submitted (07-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Chinese National Human Genome Center at Shanghai, 351 Guo Shoujing Road,
RL   Shanghai 201203, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1234
FT                   /organism="Schistosoma japonicum"
FT                   /mol_type="mRNA"
FT                   /clone="SJCHGC02854"
FT                   /db_xref="taxon:6182"
FT   CDS             198..>1234
FT                   /codon_start=1
FT                   /product="SJCHGC02854 protein"
FT                   /note="similar to
FT                   UDP-N-acetylglucosamine:alpha-3-D-mannoside
FT                   beta-1,2-N-acetylglucosaminyltransferase I"
FT                   /db_xref="GOA:Q5BVR5"
FT                   /db_xref="InterPro:IPR004139"
FT                   /db_xref="UniProtKB/TrEMBL:Q5BVR5"
FT                   /protein_id="AAX28510.2"
FT                   /translation="MKYYELLNQLHYVGAWSWRRLFKSIIVELTTILLCVYFIFHFAVY
FT                   YGSEIKVLSNLKNHIQQLSNSLDQNIMLQMKFYSTLKKTNISPKKITIPILVVACNRPT
FT                   VNRPIDKLLQLKSEIQDQNNFEFPIFVSHGCDSSTTEEVLRSYQNATTVIKPNIPLTKS
FT                   GSARNTFEGYRHVSHHYKWALDQIFLIRNYSAVIIVEDDLDLAPDFLSYFMGTYTLLAQ
FT                   DNTLFCVSAFNDNGRIHLIDVTRPDLLYRTDFFPGLGWMLLREFWLEIREGWPDVYWDE
FT                   YMRKSYVRKGRACIRPEISRSITFGRIGISQGQYFDSHLKYIKLSTTKINFQQLDLSYL
FT                   NENVYR"
XX
SQ   Sequence 1234 BP; 394 A; 201 C; 208 G; 431 T; 0 other;
     tttttgagtc ttacgttacg tgtggggatt caaagttaac cgtagcgtgt tgttgatatc        60
     tttctggagt tagtacggga caaaccatct ccagaagata attgtggagt tacataaacc       120
     tctattagtg caaccgtaaa tgcattactt attcttttct gtgcaatcaa cctactttca       180
     tactcaaaat tagcagtatg aaatattacg aacttctaaa tcaattgcac tatgtaggag       240
     cctggtcatg gcgtcgatta ttcaaatcaa taatagtgga gttaaccacc attttattat       300
     gtgtatactt cattttccac tttgctgttt actatgggtc tgaaattaaa gtgctgtcta       360
     atttgaaaaa tcatattcaa caattatcaa attctttaga tcagaatata atgctgcaaa       420
     tgaaatttta ttcaacactg aagaaaacaa acatttcacc taaaaaaatt actatcccga       480
     ttctagtggt agcttgtaat cgtcccactg ttaatcgtcc gattgataaa ctgttacagt       540
     taaaatctga aatacaagat caaaataact ttgaatttcc gattttcgtt tctcatggtt       600
     gtgacagtag cactactgaa gaagttttac gttcttatca gaatgctact actgtaataa       660
     aaccaaatat cccattaact aaatcaggtt ctgctcgaaa tacatttgaa ggttacagac       720
     atgttagtca tcattataaa tgggcattag atcaaatatt tcttatacgt aattattcag       780
     ctgttattat cgtagaagat gatctggatt tggcaccaga ctttttaagc tattttatgg       840
     gtacatacac tcttctagct caggataata cacttttctg tgtgtctgcc tttaatgaca       900
     acggacgaat tcatttaatt gatgttacac gtcctgactt attgtacaga accgatttct       960
     ttcctggttt gggttggatg ttattaagag aattttggtt agaaattcgt gaagggtggc      1020
     ctgatgttta ctgggatgaa tatatgcgta aatcatatgt acgcaaagga cgagcttgta      1080
     ttcgaccaga aattagtcgt tctataacat ttggacgaat aggtatatcg caaggtcaat      1140
     attttgatag ccatttaaaa tatattaaat taagtactac aaagatcaat tttcaacagc      1200
     ttgatttatc ctatttaaat gaaaatgtat atcg                                  1234
//
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