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EBI DbfetchID AY734457; SV 1; linear; mRNA; STD; VRT; 2214 BP. XX AC AY734457; XX DT 01-JAN-2005 (Rel. 82, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Danio rerio EXT1c mRNA, complete cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2214 RX DOI; 10.1002/dvdy.20248 RX PUBMED; 15614771. RA Siekmann A.F., Brand M.; RT "Distinct tissue-specificity of three zebrafish ext1 genes encoding RT proteoglycan modifying enzymes and their relationship to somitic Sonic RT hedgehog signaling"; RL Dev. Dyn. 232(2):498-505(2005). XX RN [2] RP 1-2214 RA Siekmann A.F., Brand M.; RT ; RL Submitted (25-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL Max Planck Institute of Molecular Cell Biology and Genetics, RL Pfotenhauerstr., Dresden 01307, Germany XX FH Key Location/Qualifiers FH FT source 1..2214 FT /organism="Danio rerio" FT /mol_type="mRNA" FT /db_xref="taxon:7955" FT CDS 1..2214 FT /codon_start=1 FT /product="EXT1c" FT /note="glycosyltransferase" FT /db_xref="GOA:Q5IGR6" FT /db_xref="InterPro:IPR015338" FT /db_xref="UniProtKB/Swiss-Prot:Q5IGR6" FT /db_xref="ZFIN:ZDB-GENE-050211-5" FT /protein_id="AAW29035.1" FT /translation="MQARKKYVLLGLCTCCWILLYYWAGLQERLLGLITHRRGEVPRPW FT PDWLDRALLPNFAEQLDLQNGGGPGDSPRQRKQAWSSIYKDSRCRMDTCFDFGRCQTQS FT GFRVYIYPPEKGERVSEGYRKILTSVSESRYYTSDPREACLFVLGIDTLDRDQLSQQFV FT PNVDERIRGYPLWNDGRNHVIFNLYSGTWPNYTEDLGFNVGQAILAKASLNTEHFRPGF FT DISIPLFSKEHPQKGGKRGWLVRNSVPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNG FT KDIVSLTTCRHGKDWEKHKDARCDHDNQEYERFDYQELLHNSTFCLVPRGRRLGSFRFL FT ESLQAACIPVLLSNGWELPFSDVIQWNQAVVEGDERLLLQVPSTVRAVGIDRVLALRQQ FT TQTLWDAYFSSVDKIVLTTLEIIKDRVYSHISRNKLMWNALPGGLLVLPEFSTHLAHYP FT FYYLHLGISPGLEFTAVIHATSPLVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKSPPQ FT RSKWPPMPVPLTVTDGRRKTSSRFLPHAAIETEAVLSLDEDTVLLTSEINFAFHVWRSF FT PDRIVGYPPRSHFWDPVKKAWGYTSKWTNEYSIILTGAAFYHRYYHHLFSHYLPSSLRA FT LVDHSCNCEDILMNFLVSSVAHLPPVKVAQRKQYKEMPSLQGTKMAPWANPEHFTQRQE FT CVNTFSSWFGYMPLEHSQFRLDPVLFKDHVSVLRKRYKDLERV" XX SQ Sequence 2214 BP; 500 A; 601 C; 593 G; 520 T; 0 other; atgcaggcac gcaagaagta cgtgcttctg ggcctgtgca cgtgctgctg gatcctgctg 60 tattactggg ccggcctgca ggagcgcctc ctgggcctca ttacacacag gagaggagag 120 gtgccgcggc cctggcctga ttggctggat cgggctttac tcccgaattt tgcagagcaa 180 ttggatctcc agaatggcgg cggcccgggc gactctcctc ggcagcggaa acaggcgtgg 240 agcagcatct acaaggacag tcgctgccgg atggatacgt gttttgactt tggacgatgc 300 caaactcaaa gtggcttccg tgtctacatc tacccacctg aaaaaggtga acgggtgtct 360 gagggctacc gtaaaattct cacttcagtc tccgagtcca gatattacac ctcggaccct 420 cgggaagcgt gtttgtttgt gttgggaatc gatacgctgg atagggatca gctttcccag 480 cagtttgtgc ccaacgttga tgaacggatt cgaggatacc cactttggaa cgacggtcga 540 aatcatgtca tctttaatct atattccggc acctggccca attacactga ggatttgggt 600 tttaacgttg gccaggctat tttagctaaa gctagtctga atactgaaca tttccggccg 660 ggttttgata tttccatccc gctgttctcc aaggagcacc cgcagaaggg cgggaaaaga 720 ggatggctgg ttcgcaactc ggttcccccg agaaggaaat atttgttgat gtttaaaggt 780 aaacgctatt tgacgggaat cggctcggat actcgcaacg ctttgcatca catacacaat 840 ggcaaggaca tcgtttcctt aacaacgtgt cgccatggaa aagactggga gaaacacaaa 900 gatgctcgct gtgaccatga caaccaggag tacgagagat ttgattatca ggagctgctc 960 cacaattcca ccttctgtct ggttccccgt ggccggcgtt tgggatcctt ccgcttcctg 1020 gagtctctac aggccgcctg catcccggtg ttgcttagca acggatggga gcttcccttc 1080 tctgatgtca tccagtggaa tcaggccgtt gtcgagggtg acgaacggct gctgctgcag 1140 gtgccgtcga cggtgcgagc ggtgggaata gacagagttc tggctctcag acaacaaaca 1200 cagacgctct gggatgctta tttctcctcc gtggacaaga tcgtcctcac cacgctggag 1260 atcatcaagg acagagtgta ctcacacatc tccagaaata agctgatgtg gaatgcctta 1320 cctggaggac tgctggtgct gcccgagttc tccacacacc tggcgcatta ccccttctac 1380 tacctacacc tggggatcag tcctggtctg gagtttaccg cggtaattca cgccacctca 1440 ccgctggtct ctcaatctca gccaatcatg aagctgcttc aggtcgtctc caagtctaaa 1500 tactgctcac agatcatcat cctgtggaac agtgagaagt cgcccccaca gaggagtaaa 1560 tggccaccga tgccagtgcc gctcaccgtc acagatggca ggaggaaaac gagcagtcgt 1620 tttctgccac acgccgccat cgagacggag gccgttctga gtctggatga agacacggtg 1680 ctgctgacca gcgagatcaa ttttgctttc catgtgtggc ggagtttccc ggacaggatt 1740 gttggttatc ctcccaggag tcatttctgg gaccctgtaa aaaaggcctg gggctacacc 1800 tctaaatgga ccaacgagta ctccatcatc ctcactggag ccgcctttta tcacaggtac 1860 taccatcacc tgttctcgca ctacctgccc tcgtctctgc gagcactggt ggatcactcc 1920 tgcaactgtg aggacatcct gatgaacttt ctagtgtcct ctgtggcaca tctgccgcct 1980 gtaaaagtgg cacagaggaa gcagtacaag gagatgccca gcctacaggg cactaagatg 2040 gcaccgtggg cgaatcctga gcactttacg cagaggcagg agtgtgtgaa caccttctcc 2100 agctggttcg gctacatgcc cctggagcac tcgcagtttc ggctggatcc ggtgctcttc 2160 aaggaccacg tgtccgtcct gcgcaaacgc tacaaagacc tggagcgagt ctga 2214 // |
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