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EBI DbfetchID AY734456; SV 1; linear; mRNA; STD; VRT; 2226 BP. XX AC AY734456; XX DT 01-JAN-2005 (Rel. 82, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Danio rerio EXT1b mRNA, complete cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2226 RX DOI; 10.1002/dvdy.20248 RX PUBMED; 15614771. RA Siekmann A.F., Brand M.; RT "Distinct tissue-specificity of three zebrafish ext1 genes encoding RT proteoglycan modifying enzymes and their relationship to somitic Sonic RT hedgehog signaling"; RL Dev. Dyn. 232(2):498-505(2005). XX RN [2] RP 1-2226 RA Siekmann A.F., Brand M.; RT ; RL Submitted (25-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL Max Planck Institute of Molecular Cell Biology and Genetics, RL Pfotenhauerstr., Dresden 01307, Germany XX FH Key Location/Qualifiers FH FT source 1..2226 FT /organism="Danio rerio" FT /mol_type="mRNA" FT /db_xref="taxon:7955" FT CDS 1..2226 FT /codon_start=1 FT /product="EXT1b" FT /note="glycosyltransferase" FT /db_xref="GOA:Q5IGR7" FT /db_xref="InterPro:IPR015338" FT /db_xref="UniProtKB/Swiss-Prot:Q5IGR7" FT /db_xref="ZFIN:ZDB-GENE-050211-4" FT /protein_id="AAW29034.1" FT /translation="MQAKKRYLISLLTGAFLVLLIYLGGGGVPGPAAPGSRSRTHGYNR FT PDQPWPHFSDPLQHFSPWDHSDTEDYNVHISPRQKRDVNSSVYKGKRCRMQSCFDFSLC FT QRNGFKVYVYPQQKGEKISESYQNILSTIEGSRFYTSDPGQACVFVLSLDTLDRDQLSP FT QYVHNLKTKVQSLALWNNGRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFR FT PNFDISIPLFSKEHPRTGGDRGYLKYNTIPPFRKYMLVFKGKRYLTGIGSDTRNALYHV FT HNAEDVVLLTTCKHGKDWQKHKDARCDKDNAEYDKYDYREMLHNSTFCLVPRGRRLGSF FT RFLEALQAACVPVMLSNGWELPFSEVIDWNTAAVIGDERLLLQIPSTVRSIHQDKILAL FT RQQTQFLWEAYFSSVEKIVLTTLEIIQDRVLQQSSRSSVMWNSHPGGLFSLPQYSSYLG FT DLPFFYAKLGIKPSPKFTAVIHAVTPLVSQSQPILKLIVSVARSQYCAQIIVLWNCDKP FT LPAKQRWPATAVPIIVIEGENKVMSSRFQPYESLISDAVLSLDEDTVLSTTEVDFAFTV FT WQSFPERIVGYPARSHFWDNNKERWGYTSKWTNDYSMVLTGAAIYHRYYHFLYTHFLPS FT SLKSMVDQLANCEDILMNFLVSAVTKLPPVKVTQKKQYKETMMGQSSRASRWADPDHFA FT QRQTCMNKFASWFGGMPLVHSQMRLDPVLFKDQVSILRKKYREIERL" XX SQ Sequence 2226 BP; 525 A; 614 C; 582 G; 505 T; 0 other; atgcaggcca aaaaacgata tctgatctcg ctcttgactg gcgcctttct agttctgctc 60 atttacttgg gaggaggagg ggtcccgggt cccgcggccc cgggctccag gagccggaca 120 catggataca accggcccga tcagccgtgg ccacacttct cggacccctt acaacacttc 180 agcccgtggg accactcgga cacggaggac tataacgtgc acatatcgcc caggcagaag 240 agagatgtga actccagcgt gtataagggt aagcggtgcc gcatgcaatc ctgctttgat 300 ttctcgctct gccaacggaa cggcttcaaa gtctacgtgt atccgcagca gaagggggag 360 aagatatcgg aaagttacca gaacatctta tccaccatcg agggctctag attttacacc 420 tctgaccctg gtcaggcgtg cgtgtttgtg ctgagcttgg acactctcga ccgagaccag 480 ttgtctccgc agtatgtgca caatctcaaa actaaagtgc agagcttggc tctgtggaac 540 aacggtagga atcacctcat atttaatttg tattctggca catggcctga ttacacggaa 600 gatttgggct ttgacattgg tcaggccatg ctggccaaag ctagcatcag caccgagaac 660 ttcagaccca actttgacat ctccatcccc ttgttctcca aggagcaccc gaggaccggc 720 ggggacaggg gctacttgaa atacaacacc attccacctt ttagaaagta tatgttggta 780 tttaagggca agcgctattt gacaggcatc ggctcggaca cgaggaatgc tttatatcac 840 gttcataacg cggaggatgt agtgctgctc accacctgca aacatggcaa agactggcag 900 aaacacaagg acgcgcgctg tgacaaggac aacgcagagt atgacaagta cgactaccgt 960 gaaatgctgc acaactctac cttctgtctg gttcctcgag gacgacgcct gggatccttc 1020 cgcttcctgg aggctcttca ggcggcctgt gtgccggtga tgctgagtaa cggttgggag 1080 ctccccttct cggaggtcat cgactggaac actgctgctg tgatcgggga cgagaggctc 1140 ctgctgcaga tcccgtccac tgttcgctcc atccatcagg acaagatcct ggctctccga 1200 cagcagacgc agttcctctg ggaggcctat ttctcttcag tggagaagat cgtgctcacc 1260 actctagaaa tcatccagga ccgggtgctc cagcagagct ccagaagcag tgtgatgtgg 1320 aacagtcacc ccggtggact cttctctctg ccgcagtact cctcatatct gggagacttg 1380 cctttcttct acgccaaact cggcatcaag ccgagtccca agttcactgc agttatccat 1440 gcagtgacgc cgctggtttc tcaatctcag cccattctca agctcatcgt ctcagtggcc 1500 agatcacagt actgcgctca gattattgtg ttgtggaact gtgacaagcc tttacctgcc 1560 aaacagcgct ggccggccac tgcagtgccc attatagtga ttgaaggaga aaacaaggtg 1620 atgagcagcc gttttcagcc gtatgaaagc ctcatcagtg atgcggtgtt gagtctggat 1680 gaagacacgg tgttgtccac cactgaggtg gactttgcct tcacagtgtg gcagagtttc 1740 ccggagagga ttgtgggata tcctgcccgc agtcatttct gggacaataa taaggagcgc 1800 tggggttaca cttccaaatg gaccaacgac tattcaatgg ttctcaccgg agctgccatt 1860 taccacagat attaccactt cctgtacacc cacttcctgc caagcagcct gaagagtatg 1920 gtggaccagc tggccaactg tgaggatatc ctgatgaact tcctggtgtc tgcggtcact 1980 aaactgccac cggtcaaagt cacgcagaag aagcagtaca aggagaccat gatgggtcag 2040 tcgtctcgag cctcgcgctg ggccgatcca gaccacttcg cccagcggca gacctgcatg 2100 aacaagttcg ccagctggtt tggcggcatg cccctggtgc attcccaaat gagactggac 2160 cccgttctgt tcaaggacca ggtctccatc ctgcgcaaga aatacaggga gatcgagcgg 2220 ctctga 2226 // |
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