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EBI DbfetchID AY734455; SV 1; linear; mRNA; STD; VRT; 2193 BP. XX AC AY734455; XX DT 01-JAN-2005 (Rel. 82, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 4) XX DE Danio rerio EXT1a mRNA, complete cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2193 RX DOI; 10.1002/dvdy.20248 RX PUBMED; 15614771. RA Siekmann A.F., Brand M.; RT "Distinct tissue-specificity of three zebrafish ext1 genes encoding RT proteoglycan modifying enzymes and their relationship to somitic Sonic RT hedgehog signaling"; RL Dev. Dyn. 232(2):498-505(2005). XX RN [2] RP 1-2193 RA Siekmann A.F., Brand M.; RT ; RL Submitted (25-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL Max Planck Institute of Molecular Cell Biology and Genetics, RL Pfotenhauerstr., Dresden 01307, Germany XX FH Key Location/Qualifiers FH FT source 1..2193 FT /organism="Danio rerio" FT /mol_type="mRNA" FT /db_xref="taxon:7955" FT CDS 1..2193 FT /codon_start=1 FT /product="EXT1a" FT /note="glycosyltransferase" FT /db_xref="GOA:Q5IGR8" FT /db_xref="InterPro:IPR015338" FT /db_xref="UniProtKB/Swiss-Prot:Q5IGR8" FT /db_xref="ZFIN:ZDB-GENE-050211-3" FT /protein_id="AAW29033.1" FT /translation="MQAKKRYLILFSAGVCLILLFYLQGPASRRTPKRGDDPHPHWPHF FT SDPLRAFIPWDQTETEDYNVRASPRHKRDDSTGADKCRMDSCFDFELCKRNGFKVYVYP FT QQKGEKISESYQNILSSIEGSRFYTSDPGQACLFVLNLDTLDRDQLSPQYVHNLKTKIQ FT NLNLWNNGRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTESFRPNFDISIPLFS FT KDHPRTGGERGFLKYNTIPPFRKYMLVFKGKRYLTGIGSDTRNALYHIHNAEDVVLLTT FT CKHGKDWQKHKDARCDKDNAEYDRYDYKEMLHNSTFCLVPRGRRLGSFRFLEALQAACV FT PVMLSNGWELPFSEIIDWRTAAVIGDERLLLQIPSTVRSIHQDRILSLRQQTQFLWEAY FT FSSVEKIVLTTLEIIQDRVLQHSAHSTLMWNRLPGGLFTLPQYSSYLGDFPFFYALLGI FT KPHQKFTAVIHAVTPLVSQSQPIFKLLVAVAKSQFCAQIMVLWNCDKPLPSKHRWPATS FT VPVIVIEGESKVMSSRFLPYENIITDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGY FT PARSHFWDSNKERWGYTSKWTNDYSMVLTGAAFYHRYYNYLYTHYLPGSLKGLVDQLSN FT CEDILMNFLVSAVTKMPPIKVTQKKQYKETMMGQTSRASRWADPDHFAQRQTCMNKFAS FT WFGTMPLVHSQMRLDPVLFRDQVSILRKKYRDIERL" XX SQ Sequence 2193 BP; 554 A; 583 C; 512 G; 544 T; 0 other; atgcaggcca aaaaacgcta tttaattctg ttctctgcag gtgtgtgtct cattctgctc 60 ttttacctgc aggggccagc ttccagaagg actccaaagc gaggggatga cccccatcca 120 cactggccac acttttcaga ccccttacga gcgttcatcc cttgggatca gactgaaacc 180 gaggactata atgtcagagc gtctcccaga cacaaacgag atgatagtac aggagctgac 240 aagtgccgaa tggactcctg ctttgacttt gagttgtgta aaagaaatgg ctttaaagtc 300 tacgtctacc ctcaacagaa aggggagaag atttctgaaa gctaccagaa tatactatcc 360 tccatcgagg ggtccagatt ttacacatct gacccgggac aggcttgcct ttttgtttta 420 aacctcgaca cccttgatcg agaccagctg tcccctcagt acgtccataa tcttaaaact 480 aaaatccaga acttgaacct gtggaataac gggaggaacc atctgatctt taacctgtat 540 tccggcacat ggccggatta cactgaggat ttggggtttg atatcggtca agccatgttg 600 gccaaagcca gcatcagcac cgaaagcttc agacccaatt ttgacatctc catccccttg 660 ttctccaaag atcacccccg gactggaggg gaaagagggt ttttaaaata caacaccatc 720 cctcctttta ggaaatacat gctggttttt aaaggcaagc gctatttgac tgggattggg 780 tctgacacca ggaatgcgct ttatcatatt cataatgctg aagatgtggt tctccttacc 840 acatgcaaac acggcaaaga ctggcagaaa cataaagatg ctcgctgcga caaggacaat 900 gcagaatatg acaggtacga ctataaagaa atgctgcaca actccacatt ctgtctggtg 960 ccgagaggac gacgcctggg ctctttccgc ttcctggagg ctctgcaggc cgcttgtgtg 1020 cccgtcatgc tgagtaacgg ctgggagctt cccttctccg agatcatcga ctggcggacg 1080 gctgctgtca tcggggacga gagacttctt ctacagattc catcgacagt tcgctccatc 1140 catcaagatc gcattctgtc actccggcag cagacgcagt tcctctggga agcgtatttc 1200 tcctctgtgg agaaaatcgt tctcactaca ctggagatca tccaggaccg tgttttgcag 1260 cacagtgctc acagcacact gatgtggaac cggctaccag gaggactctt caccctccct 1320 cagtattcat cctacctagg cgacttcccc ttcttctatg cccttctcgg tattaaacca 1380 caccagaaat tcacagccgt cattcacgca gtaacgcctc tcgtatctca gtctcagccg 1440 atattcaagc tgctagtggc tgttgccaag tctcagttct gtgcccagat catggtcttg 1500 tggaactgtg ataaacctct tccctcgaag catcgctggc ctgctacttc agttcctgtc 1560 atcgtaatcg agggcgagag caaggtgatg agtagccgat tcctgccgta tgaaaacatc 1620 ataactgatg cagtcctgag tctggatgaa gacactgtgc tctccaccac tgaggtggat 1680 tttgccttca ccgtctggca gagtttccca gagaggattg tggggtatcc tgcacggagc 1740 catttctggg actccaataa ggagcgatgg ggctacacct ctaaatggac caatgattac 1800 tccatggtgc tcactggagc tgctttctac cacaggtatt ataactactt gtacacacac 1860 tacctgcctg gcagcctgaa gggtctggtt gaccagctgt caaactgtga agacattctg 1920 atgaacttcc tggtgtctgc ggtcactaag atgcccccta ttaaggtcac tcagaagaag 1980 cagtacaagg aaaccatgat gggacagacg tcccgtgcat cacgttgggc cgaccctgac 2040 cattttgccc agaggcagac gtgcatgaac aaatttgcca gctggtttgg cacaatgccc 2100 ctggtccatt cgcaaatgag actggatcct gttctgttca gggaccaggt atcaatactg 2160 cgcaagaagt acagagacat cgagcgactc tga 2193 // |
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