 |
|
EBI DbfetchID AY662338; SV 1; linear; mRNA; STD; VRT; 2492 BP. XX AC AY662338; XX DT 08-SEP-2004 (Rel. 81, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 3) XX DE Danio rerio glycosyltransferase-like 1A mRNA, complete cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2492 RX DOI; 10.1093/glycob/cwi094 RX PUBMED; 15958417. RA Grewal P.K., McLaughlan J.M., Moore C.J., Browning C.A., Hewitt J.E.; RT "Characterization of the LARGE family of putative glycosyltransferases RT associated with dystroglycanopathies"; RL Glycobiology 15(10):912-923(2005). XX RN [2] RP 1-2492 RA Moore C.J., Hewitt J.E.; RT ; RL Submitted (23-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL Biology, University of Nottingham, Queen's Medical Centre, Nottingham, RL Notts NG7 2UH, UK XX DR Ensembl-Gn; ENSDARG00000005126; Danio_rerio. DR Ensembl-Tr; ENSDART00000023917; Danio_rerio. XX FH Key Location/Qualifiers FH FT source 1..2492 FT /organism="Danio rerio" FT /mol_type="mRNA" FT /db_xref="taxon:7955" FT CDS 1..2274 FT /codon_start=1 FT /product="glycosyltransferase-like 1A" FT /note="large; similar to Homo sapiens FT glycosyltransferase-like 1A" FT /db_xref="GOA:Q66PG2" FT /db_xref="InterPro:IPR002495" FT /db_xref="UniProtKB/Swiss-Prot:Q66PG2" FT /db_xref="ZFIN:ZDB-GENE-061204-1" FT /protein_id="AAU12251.1" FT /translation="MLGMCRGRRKFVAASLALIFIPALTWLYLSSANITVKPLPLSPLD FT PQSSAVVGAAAEHQSLELRLRDVEEHNNALRREISRTPRVPTHSSHPSSSRHGNQLHTH FT STEEGTGDSEAKKGAAAGNSSDCVPQPVVKKCETIHIAIVCAGYNASRDVVTLVKSVLF FT HRRNPLHFHIITDSIARKILADLFHTWMVPAVHVNFYDADELKSEVSWIPNKHYSGIHG FT LMKLVLTKTLPSDLEKVIVLDTDITFATDIAELWVVFHKFKGQQVLGLVENQSDWYLGN FT LWKNHRPWPALGRGFNTGVILLLLDRLRKLKWEQMWRLTAERELMSMLSTSLADQDIFN FT AVIKQNPFLVHQLPCYWNVQLSDHTRSEKCYKDVSDLKVIHWNSPKKLRVKNKHVEFFR FT NLYLTFLEYDGNLLRRELFGCPSETDHNSENLQKTLSELDEDDPCYEFRRERFTVHRTH FT VYFLHYEYEPTVDNTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRY FT AQGSEVLMSRSNVGYHIVYKEGQFYPVNLLRNVAMGQVNTPYMFLSDIDFLPMYGLYEY FT LRKSVVQLDMGNTKKALVVPAFETLRYRLSFPKSKAELLSQLDMGTLFTFRYHVWTKGH FT APTDFAKWRTATTPYRVQWEADFEPYVMVRRESPEYDRRFVGFGWNKVAHIMELDAQEY FT EFVVLPNAYMIHMPHAPSFDITKFRSNKQYRACLKTLKEEFQQNMSRRYGFAALKYMTV FT DNNS" XX SQ Sequence 2492 BP; 583 A; 689 C; 685 G; 533 T; 2 other; atgctgggaa tgtgtcgcgg gcgcaggaag tttgtggctg cctccctcgc cctgatcttc 60 atcccagccc tcacctggct ctatctgtca tccgcaaata tcacagtcaa accgctgcct 120 ctgtcgccgc tggatcccca gtcgtctgcg gtggtcggtg cggctgccga gcatcagtct 180 ttagagctga ggctccggga cgtggaggag cacaacaatg cactgcggcg agagattagc 240 aggactccca gggtcccgac ccacagcagc catccgagca gcagtcgcca cggcaaccag 300 ttgcacaccc actccacaga agagggtaca ggtgacagtg aggctaaaaa aggagctgcc 360 gccggcaaca gctcggactg tgtgcctcag cctgtggtga agaaatgcga gaccattcat 420 attgccatcg tgtgcgcggg ctacaacgca agcagggacg tcgtcacttt ggtcaagtcg 480 gttctttttc acagacgaaa cccactgcac ttccatatca tcaccgattc catcgctcgg 540 aagatcctcg ccgacctctt ccacacctgg atggtgccag ccgttcatgt caacttctat 600 gacgctgatg agctgaagtc tgaggtgtct tggattccca acaagcatta ttccggcatc 660 cacggcctga tgaagctggt gctgaccaag acgctgccct cagacctgga gaaggtcatc 720 gtcctggaca ccgacatcac attcgccacg gacatagccg agctgtgggt cgtcttccac 780 aagtttaaag gccagcaggt tcttggtttg gtggagaatc agagcgactg gtatctgggt 840 aacctgtgga agaaccatcg gccgtggcca gctctgggca ggggctttaa cacgggtgtg 900 attctgctgt tgttggatcg tttgaggaag ctgaaatggg aacagatgtg gcggctgacg 960 gcagagagag agctcatgag catgctgtct acgtcactcg ctgaccagga catcttcaac 1020 gctgtgatca agcagaaccc attcctggtg caccaactgc cctgctactg gaacgtccag 1080 ctgtctgacc acacccgctc tgagaagtgc tacaaggacg tgtccgacct caaggtgatc 1140 cactggaact ctccgaagaa gctgcgcgtg aagaacaaac acgtggagtt tttcaggaat 1200 ctctatctga ccttcctgga gtacgatgga aatctgctga ggcgagagct cttcggctgt 1260 cccagtgaaa ccgaccacaa ctcagagaac ctccagaaga ctctgtcgga gctggatgaa 1320 gatgacccgt gttatgagtt tcgccgtgaa cgattcaccg ttcatcgcac acatgtttac 1380 ttcctacact acgagtatga acccactgtg gataacactg acgtgacgct ggtggcccag 1440 ctttctatgg acagactgca gatgctggag gccatctgta aacactggga aggacccatc 1500 agtttggcgc tctacctctc agacgctgaa gcgcagcagt tcctgcggta cgctcagggc 1560 tccgaggtcc tgatgagcag gagcaacgtg ggataccaca tcgtctacaa agagggccag 1620 ttctaccccg ttaacctgct gcgcaatgtt gctatggggc aggtcaacac tccctacatg 1680 ttcctgtcgg atatcgactt cctgcctatg tatggactct atgagtacct caggaaatct 1740 gtggtccagc ttgatatggg aaacactaag aaggctctgg tggttccggc gtttgaaacg 1800 cttcgctatc ggctctcctt ccccaaatct aaagcagagc tcctgtcgca gctggacatg 1860 ggcaccctgt tcacattcag atatcacgtg tggacgaaag gtcacgctcc gacagacttc 1920 gccaaatgga gaactgccac gacaccgtac cgcgttcagt gggaagcgga ctttgagccg 1980 tacgtgatgg tgaggcggga aagcccagag tacgaccgcc gcttcgtggg cttcggctgg 2040 aataaagtag cgcacatcat ggagctggac gctcaggagt atgagttcgt ggttctgccc 2100 aatgcctaca tgatccacat gccgcacgcg cccagtttcg acatcaccaa gtttcgctcg 2160 aacaaacagt accgcgcttg cctgaagacg ctgaaggagg agtttcagca gaacatgtct 2220 aggcgctacg gcttcgctgc gctcaaatac atgacagtgg acaacaacag ctagccgagc 2280 gctcggacct gcaaaccaat gaagcgtctg cggttgagct gctcacggag cagcgtgara 2340 cwgcccaaac tgagactgca gggtcaacgg gaggcacggc tcgtgatcat ccattcattc 2400 agggatctga ggacacgttt atagcagcgc cgcagagaac ttacactgct gagtagaagt 2460 cactgatgaa cttttgggag aaggtgagcg tt 2492 // |
|