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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY648740; SV 1; linear; mRNA; STD; VRT; 1605 BP.
XX
AC   AY648740;
XX
DT   07-JUL-2004 (Rel. 80, Created)
DT   21-OCT-2008 (Rel. 97, Last updated, Version 3)
XX
DE   Danio rerio xylosylprotein beta 14-galactosyltransferase 7 mRNA, complete
DE   cds.
XX
KW   .
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [1]
RP   1-1605
RX   DOI; 10.1073/pnas.0403929101
RX   PUBMED; 15256591.
RA   Amsterdam A., Nissen R.M., Sun Z., Swindell E.C., Farrington S.,
RA   Hopkins N.;
RT   "Identification of 315 genes essential for early zebrafish development";
RL   Proc. Natl. Acad. Sci. U.S.A. 101(35):12792-12797(2004).
XX
RN   [2]
RP   1-1605
RA   Amsterdam A., Hopkins N.;
RT   ;
RL   Submitted (09-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Center for Cancer Research, Massachusetts Insitute of Technology, 77
RL   Massachusetts Avenue E17-336, Cambridge, MA 02139, USA
XX
DR   Ensembl-Gn; ENSDARG00000021899; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000037999; Danio_rerio.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1605
FT                   /organism="Danio rerio"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7955"
FT   CDS             520..1473
FT                   /codon_start=1
FT                   /product="xylosylprotein beta 14-galactosyltransferase 7"
FT                   /db_xref="GOA:Q6DRL9"
FT                   /db_xref="InterPro:IPR003859"
FT                   /db_xref="UniProtKB/TrEMBL:Q6DRL9"
FT                   /db_xref="ZFIN:ZDB-GENE-040727-3"
FT                   /protein_id="AAT68058.1"
FT                   /translation="MMYSSRRKPVLYFKDERSFLSRKCTVWKLFGLCMVFVFGSLLWVQ
FT                   LTCTGDMSQTAGYSHLPQQPCPIDKQSSHVDDPSWGPHKMALIVPFRERFEELLVFVPY
FT                   MHAFLNKKKIRHKIFIINQVDHFRFNRASLINVGFMESGNDTDYIAMHDVDLLPQNEDL
FT                   NYGFPVDGPFHVASPELHPLYHYKTYVGGILLLTKKHYLACNGMSNRFWGWGRENDEFF
FT                   RRLKAANLELFRPTGITTGTKTFRHIHDPAWRKRDQKRIAAQKQEQFKVDPEGGLSNLR
FT                   YKVESRKEVSISGAPCTVINTFVECDLNQTPWCQFS"
XX
SQ   Sequence 1605 BP; 456 A; 325 C; 374 G; 450 T; 0 other;
     tttcccgagg gacgctttta gccagcgtgt gattcttttc ttttgtcaca gttctctgtc        60
     aagttgttat atatttatcg gcaatgacgc gtcgtaataa ataaacagac actatatact       120
     atatctgggc cttttaacac acgtttaatc ggtcattctc gtggacgcgt tttcctaaaa       180
     tcagctcttg ccgtctgctt gttatttgtc gtaccgttat gagtgacgtg taacttaacg       240
     cgaaattctt cacaaataac agatctgaaa caggtttata atgcgcttaa gcgtgttaaa       300
     gtggttgtgt ctactatgaa agaacacatt caagccgtcc gctgaggatg tgataaattg       360
     cagctcgttt atgatggaaa gagacaaaag acagtgtcat aaacaggaat tggattttaa       420
     catgtaacgg tagatgactg aggctgaata tcagtgagga tatttggatc agcttgcttt       480
     tcttcagcgt ggtacggtgt tgctcagaaa ggcacaaaga tgatgtactc ttcacggagg       540
     aaacctgtgc tgtatttcaa agatgaaaga agttttctgt cgaggaaatg cactgtatgg       600
     aagctgtttg gcctctgcat ggtgtttgtt tttgggtccc ttctctgggt gcagttgacg       660
     tgtacaggag acatgagcca gactgctgga tacagccatc tccctcaaca gccctgtcca       720
     atagacaaac agtcgtccca tgttgatgat ccttcctggg gccctcataa aatggccctc       780
     attgttccat tcagagagcg ctttgaagag ctgcttgtgt ttgtcccgta tatgcacgct       840
     ttcctcaaca agaagaaaat acgccataaa atatttatta taaaccaagt agatcacttt       900
     cggttcaatc gtgcctctct tattaacgtt ggcttcatgg aaagtgggaa tgacacagac       960
     tacattgcaa tgcatgatgt ggacttgttg cctcaaaacg aggatctgaa ctatgggttt      1020
     ccagtagacg ggcccttcca cgtggcctca ccagagcttc atcctttata tcactataag      1080
     acgtatgttg gaggaatcct gctgctcact aagaaacatt atctggcgtg caacgggatg      1140
     tcaaaccgct tttggggatg gggaagagaa aatgacgagt ttttcaggag actgaaagca      1200
     gctaatcttg agctttttag accaacaggt attactacag gaactaaaac atttagacac      1260
     atccatgatc cagcctggag gaaaagagac cagaagcgga tcgctgcaca aaaacaggag      1320
     cagtttaagg tggaccctga gggtggcctg agtaaccttc gctacaaggt ggagtccaga      1380
     aaagaagtgt ctatcagtgg agctccatgt actgtgatca acacctttgt ggagtgtgac      1440
     ctcaaccaga ccccatggtg ccagttcagc taataatagt tgataatgca taattcactt      1500
     aatgcttgaa caggacctgg gaagccagaa tgatacggat tctccttttg tggtgaaagg      1560
     aaagctttca cagattatca gtgaaggtca cactgaaaaa aaaaa                      1605
//
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