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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY633657; SV 1; linear; genomic DNA; STD; FUN; 809 BP.
XX
AC   AY633657;
XX
DT   12-JUL-2004 (Rel. 80, Created)
DT   30-JUL-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Colletotrichum lindemuthianum chitin deacetylase gene, partial cds.
XX
KW   .
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OS   Glomerella lindemuthiana
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC   Sordariomycetes incertae sedis; Phyllachorales; Phyllachoraceae;
OC   Glomerella.
XX
RN   [1]
RP   1-809
RX   DOI; 10.1016/j.pep.2004.08.012
RX   PUBMED; 15555935.
RA   Shrestha B., Blondeau K., Stevens W.F., Hegarat F.L.;
RT   "Expression of chitin deacetylase from Colletotrichum lindemuthianum in
RT   Pichia pastoris: purification and characterization";
RL   Protein Expr. Purif. 38(2):196-204(2004).
XX
RN   [2]
RP   1-809
RA   Shrestha B., Lauge R., Langin T., Le Hegarat F.;
RT   "Cloning and expression of chitin deacetylase from Colletotrichum
RT   lindemuthianum UPS9";
RL   Unpublished.
XX
RN   [3]
RP   1-809
RA   Shrestha B., Lauge R., Langin T., Le Hegarat F.;
RT   ;
RL   Submitted (24-MAY-2004) to the EMBL/GenBank/DDBJ databases.
RL   Institut de Genetique et Microbiologie, Universite Paris-XI, Batiment 360,
RL   Orsay 91405, France
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FH   Key             Location/Qualifiers
FH
FT   source          1..809
FT                   /organism="Glomerella lindemuthiana"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:290576"
FT   mRNA            join(<1..65,128..>809)
FT                   /product="chitin deacetylase"
FT   CDS             join(<1..65,128..809)
FT                   /codon_start=1
FT                   /product="chitin deacetylase"
FT                   /function="removes N-acetyl group from N-acetyl glucosamine
FT                   units of chitinous substance"
FT                   /EC_number="3.5.1.41"
FT                   /note="carbohydrate modifying protein"
FT                   /db_xref="GOA:Q6DWK3"
FT                   /db_xref="InterPro:IPR002509"
FT                   /db_xref="PDB:2IW0"
FT                   /db_xref="UniProtKB/TrEMBL:Q6DWK3"
FT                   /protein_id="AAT68493.1"
FT                   /translation="MHFSTLFGAAATAALAGSTNASPLARRQVPVGTPILQCTQPGLVA
FT                   LTYDDGPFTFTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRADGHLVGSH
FT                   TYAHPDLNTLSSADRISQMRHVEEATRRIDGFAPKYMRAPYLSCDAGCQGDLGGLGYHI
FT                   IDTNLDTKDYENNKPETTHLSAEKFNNELSADVGANSYIVLSHDVHEQTVVSLTQKLID
FT                   TLKSKGYRAVTVGECLGDAPENWYKA"
XX
SQ   Sequence 809 BP; 164 A; 315 C; 207 G; 123 T; 0 other;
     atgcacttct cgaccctttt tggcgccgcg gctactgctg ctctcgctgg cagcacgaac        60
     gcaaggtacg tcgccggcgg ctccttgggc ccttgacaca gacaccccag actgacacaa       120
     ctcacagccc tctcgcccgt cgccaggttc ccgtgggcac acccatcctc cagtgcaccc       180
     agcctggtct ggttgccctg acctacgacg acggtccctt caccttcacc ccgcagctcc       240
     tcgacatctt gaagcagaac gacgtcaggg cgaccttttt cgtcaacggc aacaactggg       300
     ccaacatcga ggccggatcc aaccccgaca ccatccgccg catgcgcgcc gacggccacc       360
     tcgtcggctc tcacacgtac gctcacccgg acctcaacac gctctcctcc gcggaccgca       420
     tctcccagat gcggcacgtc gaggaggcta cccgccgcat cgacggcttc gcgcccaagt       480
     acatgcgcgc gccctacctg tcgtgcgacg cgggctgcca gggcgacctc ggcggcctcg       540
     gataccacat catcgacacc aacctcgaca ccaaggacta cgagaacaac aagcccgaga       600
     ccacgcacct ctcggccgag aagttcaaca acgagctgag cgccgacgtc ggcgccaaca       660
     gctacattgt cctctcgcac gacgtccacg agcagacggt cgtctccctc acgcagaagc       720
     tgattgacac gctcaagagc aagggctacc gcgccgtcac cgtcggcgag tgcctcggcg       780
     acgccccgga gaactggtac aaggcgtaa                                         809
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