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EBI DbfetchID AY584603; SV 1; linear; viral cRNA; STD; VRL; 1821 BP. XX AC AY584603; XX DT 27-APR-2004 (Rel. 79, Created) DT 20-APR-2007 (Rel. 91, Last updated, Version 4) XX DE Mumps virus Jeryl Lynn 5 vaccine strain hemagglutination neuraminidase (HN) DE gene, complete cds. XX KW . XX OS Mumps virus OC Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae; OC Paramyxovirinae; Rubulavirus. XX RN [1] RP 1-1821 RX DOI; 10.1016/j.virol.2006.09.040 RX PUBMED; 17081582. RA Kulkarni-Kale U., Ojha J., Manjari G.S., Deobagkar D.D., Mallya A.D., RA Dhere R.M., Kapre S.V.; RT "Mapping antigenic diversity and strain specificity of mumps virus: a RT bioinformatics approach"; RL Virology 359(2):436-446(2007). XX RN [2] RP 1-1821 RA Kapre S.V., Deobagkar D.D., Mallya A.D., Dhere R.M.; RT "Mumps virus HN Gene Jeryl Lynn 5 vaccine strain"; RL Unpublished. XX RN [3] RP 1-1821 RA Kapre S.V., Deobagkar D.D., Mallya A.D., Dhere R.M.; RT ; RL Submitted (26-MAR-2004) to the EMBL/GenBank/DDBJ databases. RL Research & Development, Serum Institute of India, 212/2, Hadapsar, Pune, RL Maharashtra 411028, India XX FH Key Location/Qualifiers FH FT source 1..1821 FT /organism="Mumps virus" FT /strain="Jeryl Lynn 5 vaccine strain" FT /mol_type="viral cRNA" FT /country="India" FT /db_xref="taxon:11161" FT gene 1..1749 FT /gene="HN" FT CDS 1..1749 FT /codon_start=1 FT /gene="HN" FT /product="hemagglutination neuraminidase" FT /db_xref="GOA:Q9J4L1" FT /db_xref="HSSP:1USR" FT /db_xref="InterPro:IPR016285" FT /db_xref="UniProtKB/TrEMBL:Q9J4L1" FT /protein_id="AAS93546.1" FT /translation="MEPSKLFIMSDNATFAPGPVVNAAGKKTFRTCFRILVLSVQAVIL FT ILVIVTLGELIRMINDQGLSNQLSSITDKIRESAAVIASAVGVMNQVIHGVTVSLPLQI FT EGNQNQLLSTLATICTNRNQVSNCSTNIPLINDLRFINGINKFIIEDYATHDFSIGHPL FT NMPSFIPTATSPNGCTRIPSFSLGKTHWCYTHNVINANCKDHTSSNQYVSMGILAQTAS FT GYPMFKTLKIQYLSDGLNRKSCSIATVPDGCAMYCYVSTQLETDDYAGSSPPTQKLILL FT FYNDTITERTISPSGLEGNWATLVPGVGSGIYFENKLIFPAYGGVLPNSTLGVKLAREF FT FRPVNPYNPCSGPQQELDQRALRSYFPSYFSSRRVQSAFLVCAWNQILVTNCELVVPSN FT NQTLMGAEGRVLLINNRLLYYQRSTSWWPYELLYEISFTFTNYGQSSVNMSWIPIYSFT FT RPGSGHCSGENVCPIVCVSGVYLDPWPLTPYRHQSGINRNFYFTGALLNSSTTRVNPTL FT YVSALNNLKVLAPYGTQGLFASYTTTTCFQDTGDASVYCVYIMELASNIVGEFQILPVL FT ARLTIT" XX SQ Sequence 1821 BP; 530 A; 405 C; 352 G; 534 T; 0 other; atggagccct cgaaactatt tataatgtcg gacaatgcca cctttgcacc tggacctgtt 60 gttaatgcgg ctggtaagaa gacattccga acctgtttcc gaatattggt cctatctgta 120 caagcagtta tccttatatt ggttattgtc actttaggtg agcttattag gatgatcaat 180 gatcaaggct tgagcaatca gttgtcttca attacagaca agataagaga atcagctgct 240 gtgattgcat ctgctgtggg agtaatgaat caagttattc atggagtaac ggtatcctta 300 cctctacaaa ttgagggtaa ccaaaatcaa ttattatcca cacttgctac aatctgcaca 360 aacagaaatc aagtctcaaa ctgctccaca aacatcccct taattaatga ccttaggttt 420 ataaatggaa tcaataaatt catcattgaa gattatgcaa cccatgattt ctccatcggc 480 catccactta acatgcctag ctttatcccc actgcaacct cacccaatgg ttgcacgaga 540 attccatcct tttctttagg taagacacac tggtgttaca cacataatgt aattaatgcc 600 aactgcaagg atcatacttc atccaaccaa tatgtttcca tggggattct tgctcaaacc 660 gcgtcagggt atcccatgtt caaaacccta aaaatccaat atctcagtga tggcctgaat 720 cggaaaagct gctcaattgc aacagtccct gatggttgcg cgatgtactg ttacgtttca 780 actcaacttg aaaccgacga ctatgcgggg tccagcccac ctacccagaa acttatcctg 840 ttattctata atgacaccat cacagaaagg acaatatctc catctggtct tgaagggaat 900 tgggctactt tggtgccagg agtggggagt ggaatatatt tcgaaaataa gttgatcttt 960 cctgcatacg ggggtgtatt gcccaatagt acactaggag ttaaattagc aagagaattt 1020 ttccggcccg ttaatccata taatccatgt tcaggaccac aacaagagtt agatcagcgt 1080 gctttgagat catatttccc aagttacttc tctagtcgac gggtacagag tgcatttctg 1140 gtctgtgctt ggaatcagat cctagttaca aattgcgagc tagttgtccc ctcaaacaat 1200 cagacactga tgggtgcaga aggaagagtt ttattgatca acaatcgact attatattat 1260 cagaggagta ctagctggtg gccgtatgaa ctcctctatg agatatcatt cacatttaca 1320 aactacggtc aatcatctgt gaatatgtcc tggataccta tatattcatt cactcgtcct 1380 ggttcgggcc actgcagtgg tgaaaatgta tgcccaatag tctgtgtatc aggagtttat 1440 cttgatccct ggccattaac tccatacaga caccaatcag gcattaacag aaatttctat 1500 ttcacaggtg cactgctaaa ttcaagcaca accagggtga atcctacact ttatgtctct 1560 gcccttaata atcttaaagt actagcccca tatggtactc aaggattgtt tgcttcatac 1620 accacaacca cctgctttca agataccggc gacgccagtg tgtattgtgt ctatattatg 1680 gaactggcat cgaatattgt tggggaattc caaattctac ctgtgctagc cagattgacc 1740 atcacttgag ttgtagtgaa tgtagcagga agctttacgg gcgtgtctca tttcttattg 1800 attattaaga aaaaacaggc c 1821 // |
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