EBI Dbfetch

ID   AY575951; SV 1; linear; genomic DNA; STD; PRO; 1690 BP.
XX
AC   AY575951;
XX
DT   01-JAN-2005 (Rel. 82, Created)
DT   19-JUL-2006 (Rel. 88, Last updated, Version 3)
XX
DE   Mycobacterium vanbaalenii strain PYR-1 putative oxidoreductase gene,
DE   partial cds; putative cytochrome p450 (cyp51) and putative ferredoxin
DE   (fdx') genes, complete cds; and hypothetical protein gene, partial cds.
XX
KW   .
XX
OS   Mycobacterium vanbaalenii PYR-1
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium.
XX
RN   [1]
RP   1-1690
RX   DOI; 10.1007/s00253-005-0190-8
RX   PUBMED; 16317545.
RA   Brezna B., Kweon O., Stingley R.L., Freeman J.P., Khan A.A., Polek B.,
RA   Jones R.C., Cerniglia C.E.;
RT   "Molecular characterization of cytochrome P450 genes in the polycyclic
RT   aromatic hydrocarbon degrading Mycobacterium vanbaalenii PYR-1";
RL   Appl. Microbiol. Biotechnol. 71(4):522-532(2006).
XX
RN   [2]
RP   1-1690
RA   Brezna B.;
RT   ;
RL   Submitted (18-MAR-2004) to the EMBL/GenBank/DDBJ databases.
RL   Microbiology, NCTR US FDA, 3900 NCTR Road, Jefferson, AR 72079, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1690
FT                   /organism="Mycobacterium vanbaalenii PYR-1"
FT                   /strain="PYR-1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:350058"
FT   CDS             <1..65
FT                   /codon_start=3
FT                   /transl_table=11
FT                   /product="putative oxidoreductase"
FT                   /db_xref="UniProtKB/TrEMBL:Q5IZM5"
FT                   /protein_id="AAT40577.1"
FT                   /translation="SARLGKDRQQLKVDKEALNS"
FT   gene            62..1420
FT                   /gene="cyp51"
FT   CDS             62..1420
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="cyp51"
FT                   /product="putative cytochrome p450"
FT                   /note="sterol 14-alpha demethylase; CYP51"
FT                   /db_xref="GOA:Q5IZM4"
FT                   /db_xref="InterPro:IPR001128"
FT                   /db_xref="InterPro:IPR002403"
FT                   /db_xref="InterPro:IPR017972"
FT                   /db_xref="InterPro:IPR017973"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5IZM4"
FT                   /protein_id="AAT40578.1"
FT                   /translation="MTAVKEVPRVSGGEEEHGHLEEFRTDPIGLMKRVREECGDVGWFQ
FT                   LADKQVILLSGAEANEFFFRSSDSELNQAEAYPFMTPIFGEGVVFDADPERRAEMLHNT
FT                   ALRGEHMKGHATTIEAEVRKMIEGWGESGEIDLLEFFAELTIYTSTACLIGLKFRNQLD
FT                   SRFANYYHLLERGTDPLCYVDPYLPIESFRIRDEARAGLVELVQDVMHGRIANPPKDKS
FT                   DRDMLDVLVSIKDEDGNPRFTANEITGMFISLMFAGHHTSSGTSSWTLIELLRHPEFYA
FT                   KVQQELDDLYADGQEVSFHALRQIPSLDNALKETLRLHPPLIILMRVAQDEFEVAGYPI
FT                   HKGQMVAASPAISNRIPEDFPNPDDFDPDRYEKPRQEDLINRWTWIPFGAGKHRCVGAA
FT                   FAQMQIKAIFSVLLREYEFEMAQPPESYQNDHSKMVVQLARPAKVRYRRRVRD"
FT   gene            1425..1640
FT                   /gene="fdx'"
FT   CDS             1425..1640
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="fdx'"
FT                   /product="putative ferredoxin"
FT                   /note="iron-sulfur protein that transfers electrons in a
FT                   wide variety of metabolic reactions; involved in electron
FT                   transport for cytochrome P450 system"
FT                   /db_xref="GOA:Q5IZM3"
FT                   /db_xref="InterPro:IPR001080"
FT                   /db_xref="InterPro:IPR010693"
FT                   /db_xref="UniProtKB/TrEMBL:Q5IZM3"
FT                   /protein_id="AAT40579.1"
FT                   /translation="MSGNRGYRVHVDEDLCQGHAMCELEAPDVFRVPKRGVVEITDPEP
FT                   PDELREAVELAVEMCPTRALTIIEKE"
FT   CDS             1643..>1690
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q5IZM2"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /protein_id="AAT40580.1"
FT                   /translation="MASREQLEDWVQRWLK"
XX
SQ   Sequence 1690 BP; 337 A; 541 C; 546 G; 266 T; 0 other;
     gctccgctcg cctcggtaaa gaccgtcaac aactgaaggt cgataaggag gccctgaatt        60
     catgaccgct gtcaaagaag tgccgcgggt ctccggcgga gaagaggaac acggccacct       120
     ggaggagttc cgcaccgacc ccatcggtct gatgaagcgt gtccgcgagg agtgcggtga       180
     cgtcggctgg ttccagctcg ccgacaagca ggtgatcctg ctctcgggcg ccgaagccaa       240
     cgagttcttc ttccgttcca gcgacagtga actcaaccag gccgaggcgt acccgttcat       300
     gacgccgatc ttcggcgagg gcgtggtgtt cgacgccgat cccgagcgcc gcgccgagat       360
     gctgcacaac accgcgctgc gcggcgagca catgaagggc cacgccacca cgatcgaggc       420
     cgaagtccgc aagatgatcg aggggtgggg cgagagcggg gagatcgatc tgctggagtt       480
     cttcgccgag ctgacgatct acacgtcgac ggcctgcctg atcgggctta agttccgtaa       540
     tcagctcgac tcccggttcg ccaactacta ccacctgctc gagcgcggca ccgatccgct       600
     ctgttacgtc gacccgtacc tgccgatcga gagcttccgc atccgcgacg aggccagggc       660
     cgggctcgtc gagctcgtcc aggacgtgat gcacggccga atcgccaacc cgcccaagga       720
     caagagcgat cgcgacatgc tcgacgtgct ggtgtcgatc aaggacgagg acggcaaccc       780
     gcgcttcacc gccaacgaga tcaccgggat gttcatctcg ctgatgttcg ccgggcacca       840
     caccagctcg ggcacctcgt cgtggacgct gatcgagctg ctgcgccacc cggagttcta       900
     cgccaaggtc cagcaggaac tcgacgacct ctacgccgac ggccaggagg tgagtttcca       960
     tgcgctgcgc cagattccga gtctcgacaa cgcgctcaag gagacgttgc ggcttcatcc      1020
     tccgctgatc atcctgatgc gggtcgccca ggacgagttc gaggtggcgg gttacccgat      1080
     ccacaagggg cagatggttg cggcgtcgcc ggcgatctcc aaccggatcc ccgaggactt      1140
     cccgaacccg gacgacttcg acccggaccg ctacgagaag ccgcggcagg aggacctgat      1200
     caaccgatgg acgtggatcc cgttcggcgc cggtaagcac cgctgcgtcg gcgccgcgtt      1260
     cgcccagatg cagatcaagg cgatcttctc ggtgctgttg cgcgagtacg agttcgagat      1320
     ggcgcagccg ccggagagct accagaacga ccactcgaag atggtggtcc agctggcccg      1380
     cccggcgaag gtccgctacc gcaggcgagt gagggactga gggaatgagc ggaaaccgcg      1440
     ggtacagagt ccatgtcgac gaggacctgt gccagggcca cgccatgtgc gagctggagg      1500
     cccccgacgt gttcagggtg cccaaacgcg gcgtcgtcga gatcaccgat cccgaacccc      1560
     cggacgagct ccgcgaagcc gtcgagctgg ctgtcgagat gtgcccgacc cgagcactga      1620
     ccatcatcga aaaggagtga gaatggcgtc acgagagcaa ctggaggact gggtccagcg      1680
     ttggctcaag                                                             1690
//