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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY525082; SV 1; linear; mRNA; STD; INV; 1150 BP.
XX
AC   AY525082;
XX
DT   09-FEB-2004 (Rel. 78, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Caenorhabditis elegans serine or cysteine protease inhibitor (srp-6) mRNA,
DE   complete cds.
XX
KW   .
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
XX
RN   [1]
RP   1-1150
RX   DOI; 10.1074/jbc.M400261200
RX   PUBMED; 14739286.
RA   Pak S.C., Kumar V., Tsu C., Luke C.J., Askew Y.S., Askew D.J., Mills D.R.,
RA   Bromme D., Silverman G.A.;
RT   "SRP-2 is a cross-class inhibitor that participates in postembryonic
RT   development of the nematode Caenorhabditis elegans: initial
RT   characterization of the clade L serpins";
RL   J. Biol. Chem. 279(15):15448-15459(2004).
XX
RN   [2]
RP   1-1150
RA   Luke C.J., Silverman G.A.;
RT   ;
RL   Submitted (13-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Department of Pediatrics, Harvard Medical School, Children's Hospital
RL   Boston, 300 Longwood Ave, Enders 950, Boston, MA 02115, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1150
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="V"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:6239"
FT   gene            1..1150
FT                   /gene="srp-6"
FT   CDS             1..1128
FT                   /codon_start=1
FT                   /gene="srp-6"
FT                   /product="serine or cysteine protease inhibitor"
FT                   /note="serpin"
FT                   /db_xref="GOA:O01462"
FT                   /db_xref="HSSP:1OVA"
FT                   /db_xref="InterPro:IPR000215"
FT                   /db_xref="UniProtKB/TrEMBL:O01462"
FT                   /protein_id="AAS13530.1"
FT                   /translation="MSDSSSDEKMGLLLHSETDFGLSLLRQQNLTESFVFSPLSIALAL
FT                   SLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKT
FT                   FTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEEL
FT                   VAVLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQFQVL
FT                   SLPYKDTSFALSIFLPKTRFGLSEALQNLDSVTIQQLMSNTSNTLVNIAMPKWKIETAL
FT                   GLNRALMAVGIEKAFTDSADLSNFADGIYISQAAHKALIEVDEDGTVAAAATTISFSLT
FT                   SVFIPAEEPIEFTADHPFLFILSKDNHPLFIGIHN"
XX
SQ   Sequence 1150 BP; 357 A; 242 C; 217 G; 334 T; 0 other;
     atgtcggatt cgtcgtcaga tgagaaaatg ggtcttcttc tccattcgga gacagatttt        60
     ggactatcac tactccgtca gcagaacctc accgagtcct ttgttttctc tccgctctcc       120
     attgccctcg cactctctct tgtacacgtg gcggctaaag gggaaactcg tgatgagatc       180
     agaaaagcat tgctaaatgg tgcaaccgat gaggaactgg aacaacactt ttccaatatt       240
     tctgcagggc ttctggttgc agagaaaggg acagaagtga atgtggccaa tcatattttc       300
     tccagaaaaa cttttacaat caagaaatta tatttgaacg atgttaaaaa gttatacaat       360
     gctggagctt ctcaattaaa ttttgaagat caagaagcat ctgctgaagc gattaacaat       420
     tttgtcagtg aaaataccaa aggtcacatc aaaaaaatca tcaacccgga cagtattagt       480
     gaagagcttg ttgctgtgct gacgaatgct ttctacttca aagccaactg gcagacaaaa       540
     tttaaaaagg aatcaacgta caagcgggag tttttcagtt cagaaaactc caaaagagaa       600
     actgagtttc ttcattctcg taattcaaat cgaaagtact ctgaaaacgg ccagttccaa       660
     gttttgagtc ttccgtacaa agacaccagt ttcgctttga gtattttctt accaaaaact       720
     agatttggtc tctctgaagc tcttcaaaac ttggactctg tcactatcca gcaattaatg       780
     tcaaatactt ctaacacgtt ggtcaatatt gcaatgccaa agtggaaaat cgaaactgca       840
     cttgggttga atcgagcttt aatggccgtt ggaattgaga aagctttcac agattccgca       900
     gatctgagca actttgcaga tggaatctat atttcacaag cagctcacaa agcacttatt       960
     gaagtcgatg aagacggaac tgttgcggct gcagcaacaa ccatttcatt ttcacttaca      1020
     tcagttttta ttccggccga agaaccaatc gaattcactg cagatcatcc attcctattc      1080
     atcctctcaa aagataacca tccattgttt attgggattc ataactagtt aattgtttca      1140
     ttctgtgatt                                                             1150
//
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