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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY443192; SV 1; linear; genomic DNA; STD; VRT; 1152 BP.
XX
AC   AY443192;
XX
DT   21-JUL-2004 (Rel. 80, Created)
DT   11-MAY-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Paramythia montium recombination activating protein 2 (RAG2) gene, partial
DE   cds.
XX
KW   .
XX
OS   Paramythia montium (crested berrypecker)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Passeriformes; Passeroidea; Paramythiidae; Paramythia.
XX
RN   [1]
RP   1-1152
RX   DOI; 10.1073/pnas.0401892101
RX   PUBMED; 15263073.
RA   Barker F.K., Cibois A., Schikler P., Feinstein J., Cracraft J.;
RT   "Phylogeny and diversification of the largest avian radiation";
RL   Proc. Natl. Acad. Sci. U.S.A. 101(30):11040-11045(2004).
XX
RN   [2]
RP   1-1152
RA   Barker F.K., Cibois A., Schikler P., Feinstein J., Cracraft J.;
RT   ;
RL   Submitted (20-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   Bell Museum of Natural History, University of Minnesota, 1987 Upper Buford
RL   Circle, St. Paul, MN 55108, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1152
FT                   /organism="Paramythia montium"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="MV (FB15)"
FT                   /db_xref="taxon:254574"
FT   gene            <1..>1152
FT                   /gene="RAG2"
FT   mRNA            <1..>1152
FT                   /gene="RAG2"
FT                   /product="recombination activating protein 2"
FT   CDS             <1..>1152
FT                   /codon_start=1
FT                   /gene="RAG2"
FT                   /product="recombination activating protein 2"
FT                   /db_xref="GOA:Q6EDL3"
FT                   /db_xref="InterPro:IPR019793"
FT                   /db_xref="UniProtKB/TrEMBL:Q6EDL3"
FT                   /protein_id="AAR16647.1"
FT                   /translation="RSCPTGVFLLDVKQNELKMKPAFFSKDSCYLPPLRYPALCTLRSX
FT                   AKADEYQYIIHGGKTPNNDLSDKIYFMSLVSKTSKKMTFQCIEKDLGGDVPEARYGHTI
FT                   NVVHSRGKSMSVLFGGRSYTPLAQRTTEKWNSVVDCLPCVFLIDFEFGCCTSYILPELQ
FT                   DGLSFHVSVARDDTIYILGGHSLQNNTRSPNLYKLKIDLPLGSPAVTCTILPGGISVSS
FT                   AIVTQISDTEFVLVGGYHSDNQKRLACNTLVLEDSKIEIVESVSPEWTPDIKHCRMWFG
FT                   CDMGKGSVLLGIPGANKQLIPDANYFYILRCKGAEEDKEEESITQICSQTSSEDPGDST
FT                   PFEDSEEFCFSAEANSFDVDDDDTYNEDDEEDESETGYWITCCA"
XX
SQ   Sequence 1152 BP; 333 A; 247 C; 270 G; 301 T; 1 other;
     agatcctgcc ccactggtgt tttcctcctc gatgtaaagc agaatgagct caaaatgaaa        60
     cctgccttct tctctaaaga ctcgtgttac cttccccctc tccgctaccc tgctctttgc       120
     acgctcagaa gcsatgcaaa ggcggatgag taccagtata tcatccatgg tggtaaaaca       180
     cccaacaatg acctttctga taagatttac tttatgagtc tggtaagcaa aactagcaag       240
     aaaatgacgt tccaatgcat tgagaaagac ctgggtggag atgtccctga agctaggtat       300
     gggcatacga ttaatgtagt tcatagccgg ggaaaaagca tgagtgttct gtttggaggg       360
     aggtcatata ctcctcttgc acaaagaacc actgaaaaat ggaacagcgt agttgactgt       420
     ttgccatgtg tgtttctcat tgattttgag tttggatgct gtacatcata catccttcca       480
     gagcttcaag atggactttc tttccatgtt tcagttgcca gagatgatac aatctacatc       540
     ttgggaggtc actcacttca aaataacacc aggtccccca acttgtacaa gctaaaaatt       600
     gatctgcccc tgggcagccc agctgtgacc tgcaccatcc tgccaggggg gatatcggtg       660
     tcaagtgcta tagtgaccca gatcagtgat actgaatttg tccttgtcgg tggctaccac       720
     tctgacaacc agaaacggtt ggcgtgtaac accttagttc tggaagacag taagatagag       780
     attgttgaaa gtgtgagccc tgagtggaca ccagatatta aacactgcag aatgtggttt       840
     ggctgtgata tgggtaaagg gtctgttttg ctgggcattc caggggccaa caaacaatta       900
     atcccagatg caaactattt ctacattttg agatgcaaag gagcagaaga ggacaaggaa       960
     gaagaatcaa taacacaaat ttgcagtcag acatcaagtg aagaccctgg agactccact      1020
     ccatttgaag actcggagga gttttgtttt agtgctgaag ccaatagctt tgacgttgac      1080
     gatgatgaca cttacaatga agatgatgaa gaagatgaat cagaaacggg ctactggatc      1140
     acctgctgtg cc                                                          1152
//
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