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EBI Dbfetch

ID   AY428647; SV 1; linear; genomic DNA; STD; PRO; 3030 BP.
XX
AC   AY428647;
XX
DT   28-JAN-2004 (Rel. 78, Created)
DT   28-JAN-2004 (Rel. 78, Last updated, Version 1)
XX
DE   Actinobacillus pleuropneumoniae GlpE (glpE), ExbB2 (exbB2), ExbD2 (exbD2),
DE   TonB2 (tonB2), and YbaB (ybaB) genes, complete cds.
XX
KW   .
XX
OS   Actinobacillus pleuropneumoniae
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
OC   Pasteurellaceae; Actinobacillus.
XX
RN   [1]
RP   1-3030
RX   DOI; 10.1128/IAI.72.2.701-708.2004
RX   PUBMED; 14742511.
RA   Beddek A.J., Sheehan B.J., Bosse J.T., Rycroft A.N., Kroll J.S.,
RA   Langford P.R.;
RT   "Two TonB systems in Actinobacillus pleuropneumoniae: their roles in iron
RT   acquisition and virulence";
RL   Infect. Immun. 72(2):701-708(2004).
XX
RN   [2]
RP   1-3030
RA   Kroll J.S., Beddek A.J., Sheehan B.J., Bosse J.T., Rycroft A.N.,
RA   Langford P.R.;
RT   ;
RL   Submitted (06-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Infectious Diseases Group, Dept. of Pediatrics, Imperial College
RL   London, Norfolk Place, London W2 1PG, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3030
FT                   /organism="Actinobacillus pleuropneumoniae"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:715"
FT   gene            complement(264..590)
FT                   /gene="glpE"
FT   CDS             complement(264..590)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="glpE"
FT                   /product="GlpE"
FT                   /db_xref="GOA:Q6T893"
FT                   /db_xref="InterPro:IPR001763"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6T893"
FT                   /protein_id="AAR95692.1"
FT                   /translation="MSETFTEISPHQAWELIENEGATLADIRDGRRYAYSHPQDAFHLT
FT                   NESYGRFLDEVDYEEPVIVMCYHGVSSRNTAQFLVEQGFDRVYSVKGGFDGWERSGLPI
FT                   ETAY"
FT   gene            778..1230
FT                   /gene="exbB2"
FT   CDS             778..1230
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="exbB2"
FT                   /product="ExbB2"
FT                   /db_xref="GOA:Q6T892"
FT                   /db_xref="InterPro:IPR002898"
FT                   /db_xref="InterPro:IPR014172"
FT                   /db_xref="UniProtKB/TrEMBL:Q6T892"
FT                   /protein_id="AAR95693.1"
FT                   /translation="MEQMLELLQGHVDYIILGLLLLMSVVLVWKIIERVLFYKQLDVTK
FT                   YDTLQDLEIDTTRNLTTISTIGANAPYIGLLGTVLGILLTFYHLGHSGGDIDAASIMVH
FT                   LSLALKATAAGILVAIPAMMFYSGFNRKVDESKLKWQAIQARKANQ"
FT   gene            1275..1664
FT                   /gene="exbD2"
FT   CDS             1275..1664
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="exbD2"
FT                   /product="ExbD2"
FT                   /db_xref="GOA:Q6T891"
FT                   /db_xref="InterPro:IPR003400"
FT                   /db_xref="InterPro:IPR014171"
FT                   /db_xref="UniProtKB/TrEMBL:Q6T891"
FT                   /protein_id="AAR95694.1"
FT                   /translation="MKKFDEINIIPFIDIMLVLLAIVLVTASFISQGKIPVNIPKATTT
FT                   QAMKADELAKLLTITENNEFYFNDQPITKEALTSEIATWDKTQKVTLKVDGAVAFEKFV
FT                   ELTDVLSANEIKNVAIVTKKDTSKK"
FT   gene            1674..2531
FT                   /gene="tonB2"
FT   CDS             1674..2531
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="tonB2"
FT                   /product="TonB2"
FT                   /note="periplasmic protein spanning inner and outer
FT                   membranes"
FT                   /db_xref="GOA:Q6T890"
FT                   /db_xref="InterPro:IPR003538"
FT                   /db_xref="InterPro:IPR006260"
FT                   /db_xref="UniProtKB/TrEMBL:Q6T890"
FT                   /protein_id="AAR95695.1"
FT                   /translation="MKKKHSRIGLTGSILIHTAIFGGLASMVTHSHSDDLPQEETMSME
FT                   LVAALLEQPQVAVAQEEPAPPEPEKVEVEPEPEPEAEAIPELKPQPKPKEKPKEKPKEK
FT                   PKPKEPPKPKEKEKPKKEKVKDKPIKALEKGPEAKQGIVAKAIPNAVQGTQLRAGIPNG
FT                   KPEGNPNGLSANGSQNGAVGGSGSGASGSEIGAYKAALQRALQRRANNAYPTREKMMRK
FT                   TGVVTIGFTVSSSGELINVKVLNSSGNGNLDNAAVKAAQSTKVSPPPAGFPSNVTVPVK
FT                   FSIE"
FT   gene            2700..3029
FT                   /gene="ybaB"
FT   CDS             2700..3029
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ybaB"
FT                   /product="YbaB"
FT                   /db_xref="InterPro:IPR004401"
FT                   /db_xref="UniProtKB/TrEMBL:Q6T889"
FT                   /protein_id="AAR95696.1"
FT                   /translation="MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKVT
FT                   INGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDAVRRAEEMQKEKMASVTAGMQLPPG
FT                   MKFPF"
XX
SQ   Sequence 3030 BP; 968 A; 653 C; 614 G; 795 T; 0 other;
     gaattctaaa ttgagctgcc aatgcttgtt gttcgtcaca attcacggtt gccaataaaa        60
     attgtgccgg attttcatcc gccaaccggc gtaataatga atccatttcc aatgaagcca       120
     cttctctcgg cgagataaaa ttaaacacga ccggcacttg tgtcgccgca ttccacactt       180
     cactaaaatt actttcggta acattgacaa aataattcat actcttttcc taatctaaaa       240
     aatcggcaaa ttatacttta tttttagtaa gccgtttcaa tcggtaaacc gcttctttcc       300
     caaccgtcga aaccgccttt cacgctatat acgcgatcaa aaccctgttc gactaaaaat       360
     tgtgcggtat tacgactgct cacgccgtga tagcacatga cgatgaccgg ttcttcataa       420
     tccacttcat ctaaaaaacg cccgtagctt tcattagtta aatggaacgc atcttgcgga       480
     tggctatagg cataacgacg tccatcacga atatccgcta aagtcgcacc ttcgttttcg       540
     attaattccc acgcctgatg cgggctgatc tcagtaaatg tttcactcat atttcatgct       600
     caataagaaa aataaaccaa ataaaattaa tcgactatac cataagacgt ttacaaaaat       660
     aaacgagaat acctattatt acgagttgaa ttttctgact tacttagtat aattgcaaac       720
     cattttcatt atacagaact cactgtttgc ttcttttaga ctgtttccga ggattttatg       780
     gaacaaatgc ttgaactttt acaaggtcat gttgattata ttattttagg cttattacta       840
     ttaatgagtg ttgtgttggt atggaaaatt attgaacgcg tacttttcta caaacaattg       900
     gatgtgacca aatatgacac gctacaagat ttggaaattg ataccactcg caatttaacc       960
     accatttcca ctatcggtgc caacgcccct tatatcggtt tattaggaac cgtattaggg      1020
     atcttactta ccttctatca tttagggcat tccggcggtg atattgacgc cgcatccatt      1080
     atggttcacc tttcgcttgc attaaaagca accgcagccg gtatcttagt cgctattccg      1140
     gcaatgatgt tctacagcgg ttttaaccgt aaagtggatg aaagcaaact taaatggcaa      1200
     gcgattcaag ctcgtaaagc caatcaataa gcggtcaaat ttcacttatt ttttgcaact      1260
     caatcaggct tcttatgaaa aaatttgacg aaattaatat tattcccttt atcgacatta      1320
     tgttggtatt actggctatc gtgttggtaa ccgcttcatt tatttctcaa ggaaaaattc      1380
     cggttaatat tccgaaagcg accacaactc aagcgatgaa agcggacgaa ttggcaaaac      1440
     ttctgacgat taccgaaaac aacgagtttt atttcaacga tcagccgatt accaaagaag      1500
     cactcacgag cgagattgca acttgggata aaacccaaaa agtaacctta aaagtggacg      1560
     gtgcggtagc ctttgaaaaa tttgtcgaac tgactgatgt tctctctgcg aatgaaatta      1620
     agaatgtcgc tatcgtgacc aaaaaagata cctcgaagaa ataggatacg agtatgaaga      1680
     aaaaacattc tcgtatcggt ttaaccggct ccattcttat ccataccgct attttcggcg      1740
     gtttagcctc tatggtaacc cattctcatt ccgatgattt accccaagaa gaaacgatgt      1800
     ctatggagtt agtcgccgca cttttggaac aacctcaagt tgccgtcgca caagaagagc      1860
     cggcaccgcc ggagccggag aaagtcgaag tcgagccgga accggagcct gaagcggaag      1920
     ctattccaga acttaaacct cagcctaagc cgaaagaaaa accgaaggaa aagcctaagg      1980
     aaaaaccaaa accgaaagaa ccgccaaagc ctaaagaaaa agaaaaacct aaaaaagaga      2040
     aagtaaaaga taaaccgatt aaggcgttag aaaaaggtcc tgaagcaaaa caaggtattg      2100
     tcgccaaagc gattcctaat gcggtacaag gcactcaatt acgtgcaggt attccaaacg      2160
     gtaaaccgga aggtaatccg aacggtcttt ccgccaacgg ttcacaaaac ggtgcggtag      2220
     gcggtagtgg tagcggagct tccggaagtg aaatcggtgc gtataaagcg gcattacaac      2280
     gtgcattaca acgccgagcc aataacgctt atccgactcg agaaaaaatg atgcgcaaaa      2340
     cgggcgtggt tactatcggt tttaccgtat cctcttccgg cgagttaatc aatgtcaaag      2400
     tgttaaacag ttccggtaac ggtaatcttg ataatgcggc ggtcaaagcg gcacaaagca      2460
     cgaaagtttc accgccgccg gcgggattcc cgagtaatgt gaccgttccg gtgaaattct      2520
     cgattgaata aatcttgtca ataagctccc gtaagggagc ttatttttac ttaagccaag      2580
     cggtcgtttt tagcttactt gttgcaaaaa atcgacaaaa gataaccgct tgcctaaagc      2640
     ggagtgctta agtaaaataa accgtttcta tttttattat acaaattgag gaaaatataa      2700
     tgtttggaaa aggcggctta ggcggtttaa tgaaacaagc tcagcaaatg caagagcgta      2760
     tgcagaaaat gcaagaagaa atcgcacagc ttgaagtcac cggcgaatcc ggtgcgggtt      2820
     tagtcaaagt aacgatcaat ggcgcacata attgccgtcg tatcgaaatc gatccgtcat      2880
     taatggaaga cgataaagag atggtggaag atttagtcgc tgccgcattc aatgatgccg      2940
     ttcgccgtgc ggaagaaatg caaaaagaaa aaatggcaag cgtgaccgcc ggcatgcaat      3000
     taccgccggg catgaaattc ccattctaat                                       3030
//


  
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