spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY398361; SV 1; linear; mRNA; STD; VRT; 1250 BP.
XX
AC   AY398361;
XX
DT   24-OCT-2003 (Rel. 77, Created)
DT   21-OCT-2008 (Rel. 97, Last updated, Version 3)
XX
DE   Danio rerio clone RK355A3C10 4-hydroxyphenylpyruvate dioxygenase (HPD)
DE   mRNA, complete cds.
XX
KW   .
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [1]
RP   1-1250
RX   DOI; 10.1073/pnas.0407241101
RX   PUBMED; 15520368.
RA   Song H.D., Sun X.J., Deng M., Zhang G.W., Zhou Y., Wu X.Y., Sheng Y.,
RA   Chen Y., Ruan Z., Jiang C.L., Fan H.Y., Zon L.I., Kanki J.P., Liu T.X.,
RA   Look A.T., Chen Z.;
RT   "Hematopoietic gene expression profile in zebrafish kidney marrow";
RL   Proc. Natl. Acad. Sci. U.S.A. 101(46):16240-16245(2004).
XX
RN   [2]
RP   1-1250
RA   Zhang G.W., Sun X.J., Wu X.Y., Song H.D., Zhou Y., Liu T.X., Deng M.,
RA   Sheng Y., Chen Y., Ruan Z., Jiang C.L., Fan H.Y., Zon L.I., Kanki J.P.,
RA   Look A.T., Chen Z.;
RT   ;
RL   Submitted (24-SEP-2003) to the EMBL/GenBank/DDBJ databases.
RL   State Key Lab for Medical Genomics, Shanghai Institute of Hematology,
RL   Ruijin Hospital Affiliated to Shanghai Second Medical University, 197 Rui
RL   Jin Road II, Shanghai 200025, P. R. China
XX
DR   Ensembl-Gn; ENSDARG00000012519; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000015922; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000018351; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000038297; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000044142; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000060907; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000069139; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000074485; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000075527; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000079571; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000007778; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000019533; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000020472; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000021985; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000023985; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000044328; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000055855; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000086302; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000108955; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000110829; Danio_rerio.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1250
FT                   /organism="Danio rerio"
FT                   /mol_type="mRNA"
FT                   /clone="RK355A3C10"
FT                   /tissue_type="kidney marrow"
FT                   /db_xref="taxon:7955"
FT   gene            1..1250
FT                   /gene="HPD"
FT   CDS             5..1198
FT                   /codon_start=1
FT                   /gene="HPD"
FT                   /product="4-hydroxyphenylpyruvate dioxygenase"
FT                   /db_xref="GOA:Q6TGZ5"
FT                   /db_xref="InterPro:IPR004360"
FT                   /db_xref="InterPro:IPR005956"
FT                   /db_xref="InterPro:IPR018146"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6TGZ5"
FT                   /db_xref="ZFIN:ZDB-GENE-040426-986"
FT                   /protein_id="AAQ97794.1"
FT                   /translation="MTSYTDKGEKPERGKFLNFHHIKFWVGNAKQAAVFYCDKFGFEPL
FT                   AYKGLETGSREVVSHAVRQDKIIFVFESALNPGNEEMGEHMIKHGDGVKDVAFLVEDCD
FT                   FLVKKAKERGAAVLKEPWVEQDAGGKVKYAIVQTYGDTTHTFVEYLGPYKGLFLPGYKE
FT                   PLFRDPLLPKLPSGHLSFIDHIVGNQPDDEMVPVSDWYQKCLLFHRFWSIDDKQIHTEY
FT                   SALRSIVVTNYEETIKMPINEPAMGKKKSQIQEYIDYNGGPGVQHIALNTSNIIQAIVN
FT                   LRARGLEFLSAPDNYYESLREKLKTAKIKVKEDLKTLQELKILVDFDDKGYLLQIFTKP
FT                   VQDRPTLFLEVIQRNNHFGFGAGNFKSLFEAIEKDQDARGNLTVLTAQNQSVSKAFQ"
XX
SQ   Sequence 1250 BP; 369 A; 283 C; 325 G; 273 T; 0 other;
     agacatgact tcttacacag ataaaggaga gaagcccgag agaggaaagt ttctaaactt        60
     tcaccatatc aaattctggg tgggaaacgc caaacaggct gcggtgtttt actgtgataa       120
     gtttggattt gagccgctgg cgtataaagg tctggagacg ggcagcagag aagtggtgtc       180
     tcatgctgtc agacaggata agattatatt tgtctttgaa tctgctctca accctggaaa       240
     tgaagaaatg ggggagcata tgataaaaca tggagacgga gtcaaagacg tggcgtttct       300
     ggtggaggac tgtgactttc tagtcaagaa agctaaagag cgtggtgcgg cggtgctgaa       360
     agagccatgg gtggagcagg acgctggcgg aaaagtcaaa tacgccatag ttcagactta       420
     tggagacacg acacacacgt ttgtggagta cttggggccg tataaaggcc tgtttctgcc       480
     aggatacaaa gagccgctgt tcagagaccc tctcttacca aaactgccgt cgggacattt       540
     aagcttcatc gaccacattg tgggaaacca gccagatgat gaaatggtgc ccgtttcgga       600
     ctggtatcag aagtgtctgc tgttccaccg gttctggtct atcgatgata agcagatcca       660
     caccgagtac agcgcgcttc gctcaatcgt cgtcactaat tatgaagaaa ccatcaagat       720
     gcccattaat gaacctgcca tgggcaagaa gaaatcacag atccaggagt acattgatta       780
     taacggaggt cctggagtgc agcatatagc tctgaacacc tccaacatca tccaggcgat       840
     tgtgaatctt cgagctcgag ggctggagtt tctgtctgct cctgataact attatgaaag       900
     tctgagagag aaactgaaga cggcaaaaat caaggtgaag gaggacctga agaccctgca       960
     ggagttaaaa atcttagtag actttgacga taaaggatac ctgctgcaga tcttcaccaa      1020
     accagtgcag gacagaccca cgctgttcct ggaggtcatt cagaggaaca accactttgg      1080
     ttttggagcc ggaaacttca agtctctgtt tgaggccatt gagaaagacc aggatgccag      1140
     aggaaacctg accgtcctca cagcgcagaa ccagagcgtc tccaaggcct ttcaataaac      1200
     acacacatgc gcacacgcag acgcacccac gaacgtacac acccccgcac                 1250
//
spacer
spacer