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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY394965; SV 1; linear; mRNA; STD; VRT; 1590 BP.
XX
AC   AY394965;
XX
DT   14-OCT-2003 (Rel. 77, Created)
DT   21-OCT-2008 (Rel. 97, Last updated, Version 4)
XX
DE   Danio rerio clone RK057A3G05 aldolase B fructose-bisphosphate mRNA,
DE   complete cds.
XX
KW   .
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [1]
RP   1-1590
RX   DOI; 10.1073/pnas.0407241101
RX   PUBMED; 15520368.
RA   Song H.D., Sun X.J., Deng M., Zhang G.W., Zhou Y., Wu X.Y., Sheng Y.,
RA   Chen Y., Ruan Z., Jiang C.L., Fan H.Y., Zon L.I., Kanki J.P., Liu T.X.,
RA   Look A.T., Chen Z.;
RT   "Hematopoietic gene expression profile in zebrafish kidney marrow";
RL   Proc. Natl. Acad. Sci. U.S.A. 101(46):16240-16245(2004).
XX
RN   [2]
RP   1-1590
RA   Song H.D., Wu X.Y., Sun X.J., Zhou Y., Liu T.X., Deng M., Zhang G.W.,
RA   Sheng Y., Chen Y., Ruan Z., Jiang C.L., Fan H.Y., Zon L.I., Kanki J.P.,
RA   Look A.T., Chen Z.;
RT   ;
RL   Submitted (18-SEP-2003) to the EMBL/GenBank/DDBJ databases.
RL   State Key Lab for Medical Genomics, Shanghai Institute of Hematology,
RL   Ruijin Hospital Affiliated to Shanghai Second Medical University, 197 Rui
RL   Jin Road II, Shanghai 200025, P. R. China
XX
DR   Ensembl-Gn; ENSDARG00000026892; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000040730; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000053684; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000061960; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000076149; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000076670; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000034541; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000059667; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000059670; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000075744; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000087334; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000088968; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000108939; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000115397; Danio_rerio.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1590
FT                   /organism="Danio rerio"
FT                   /mol_type="mRNA"
FT                   /clone="RK057A3G05"
FT                   /tissue_type="kidney marrow"
FT                   /db_xref="taxon:7955"
FT   CDS             221..1315
FT                   /codon_start=1
FT                   /product="aldolase B fructose-bisphosphate"
FT                   /note="zALDOB"
FT                   /db_xref="GOA:Q8JH71"
FT                   /db_xref="HSSP:1XDL"
FT                   /db_xref="InterPro:IPR000741"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8JH71"
FT                   /db_xref="ZFIN:ZDB-GENE-030131-383"
FT                   /protein_id="AAQ94592.1"
FT                   /translation="MTHQFPALSTEQKKELATIAERIVAPGKGILAADESTGTMAKRFQ
FT                   KINVENTEENRRSFRDLLFSVDDSISESIGGVILFHETLYQKSDKGVLFPKVIKDKGIV
FT                   VGIKVDKGTAGLAGTDGETTTQGLDGLSERCAQYKKDGCDFAKWRCVLKISDSCPSALG
FT                   IAENANVLARYASICQQNGLVPIVEPEILPDGDHDLKQCQYATEKVLAAVYKALSDHHV
FT                   YLEGTLLKPNMVTAGHSCTKKYTPLEVAMATVTALRRTVPAAVPGICFLSGGQSEEEAS
FT                   LNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASK
FT                   GEYKPSGQAGQASTQSLFTASYTY"
XX
SQ   Sequence 1590 BP; 466 A; 404 C; 350 G; 370 T; 0 other;
     gaccacgcgt ccgacccccg ttaccgcctc agccatggcg ttaccggagg ctgatcacgc        60
     ccgttccatc acgtctgtcc agcctctgct cttagcccaa ataaatagcg actgttccaa       120
     tcgttcagtc ccgattcact aaaatccatc ggcgtcacag aggagaggcc actgcataca       180
     cttttaatcc cgtgtgctgc tcaccaccaa tccactcaac atgacacacc agtttccagc       240
     tctctctacg gagcagaaga aggagcttgc cacaattgct gagcgcattg tggctcctgg       300
     aaaaggcatc ttggctgcag atgaatccac aggcaccatg gcgaagcgtt tccagaagat       360
     aaatgtagag aacactgaag aaaatcgccg tagctttcgc gaccttctct tctcagtaga       420
     tgattccatc tctgaaagca ttggtggggt catcttgttc catgaaacac tgtaccagaa       480
     gtcagacaaa ggagttctct tcccaaaggt catcaaggac aagggcatcg tagttggtat       540
     caaggtggac aaaggcacag caggactggc tggtacagat ggagagacta ccacacaggg       600
     gttggacggt ctgtctgaac gctgtgccca gtacaagaag gatggctgtg actttgccaa       660
     gtggcgttgt gtgcttaaaa tctctgacag ttgcccctcc gctcttggaa ttgctgaaaa       720
     tgccaatgtc cttgcccgat atgccagcat ttgccaacag aatggcctgg tgcctattgt       780
     agagcctgag atcctcccag acggagatca tgatctgaaa caatgccagt atgccactga       840
     gaaggtccta gcggctgtgt acaaggctct ctctgatcac cacgtttatc tggagggaac       900
     tctgctcaaa ccaaacatgg tcaccgctgg acactcctgc accaagaagt acaccccttt       960
     agaggttgcc atggccacag tcactgctct cagacgcact gtgcctgctg ctgtaccagg      1020
     aatctgcttt ctctctgggg gtcagagtga ggaagaggcc tctctgaatc tgaatgccat      1080
     gaaccagctg tccctgcaca gaccctggaa gctgagcttc tcttatggcc gtgctctcca      1140
     ggcatcggca ctttcagcct ggaagggaca agcagcgaac aagaaggctt cacaggacgc      1200
     cttcgttaca cgtgccaaga ttaatagtct tgcatcaaaa ggtgaataca aaccctcagg      1260
     tcaggctggc caagcatcca cacagtctct atttactgca agctatacct actaaactca      1320
     acaacaaaca gcaaagtgtg ctggacaata caaaaaatga gtgaagatgc caaagttatt      1380
     caagatgact ttatgacaca ctataaattg tacaaatatg ttcatgtacc tctgccaaat      1440
     ctgactcaac tagacactgt ttaacctgga ttagatttag ttttcatgca tgtgcaccta      1500
     ctgatgcttt tcattttgaa ataaaaaatg gttttatttg aaaaaaaaaa aaaaaaaaaa      1560
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa                                       1590
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