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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY344581; SV 2; linear; mRNA; STD; MAM; 1460 BP.
XX
AC   AY344581;
XX
DT   03-AUG-2003 (Rel. 76, Created)
DT   15-JUL-2006 (Rel. 88, Last updated, Version 3)
XX
DE   Bos taurus protein O-fucosyltransferase 1b (pofut1) mRNA, complete cds.
XX
KW   .
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RP   1-1460
RX   DOI; 10.1093/glycob/cwj124
RX   PUBMED; 16679357.
RA   Loriol C., Dupuy F., Rampal R., Dlugosz M.A., Haltiwanger R.S., Maftah A.,
RA   Germot A.;
RT   "Molecular evolution of protein O-fucosyltransferase genes and splice
RT   variants";
RL   Glycobiology 16(8):736-747(2006).
XX
RN   [2]
RP   1-1460
RA   Loriol C.;
RT   ;
RL   Submitted (17-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   EA 3176 Glycobiologie et Biotechnologie, Faculte des Sciences et
RL   Techniques, 123, Avenue A. Thomas, Limoges 87060, France
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1460
RA   Loriol C.;
RT   ;
RL   Submitted (21-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   UMR INRA 1061, Faculte des Sciences et Techniques, 123 av Albert Thomas,
RL   Limoges 87060, France
XX
DR   Ensembl-Gn; ENSBTAG00000016231; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000044514; Bos_taurus.
XX
CC   On Jul 21, 2005 this sequence version replaced gi:33303531.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1460
FT                   /organism="Bos taurus"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:9913"
FT   gene            1..1460
FT                   /gene="pofut1"
FT   5'UTR           1..68
FT                   /gene="pofut1"
FT   CDS             69..1124
FT                   /codon_start=1
FT                   /gene="pofut1"
FT                   /product="protein O-fucosyltransferase 1b"
FT                   /note="O-FucT-1b"
FT                   /db_xref="GOA:Q7YRE6"
FT                   /db_xref="InterPro:IPR019378"
FT                   /db_xref="UniProtKB/TrEMBL:Q7YRE6"
FT                   /protein_id="AAQ02333.1"
FT                   /translation="MGAAAWAPSLLPPRVSLLLLLLPLPGLPVGSWDPAGYLLYCPCMG
FT                   RFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNVHVSYQKYFKLEPLQAYHR
FT                   VISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFN
FT                   KSELFAGISFSASYKDQWIQRFSPEEHPVLALPGAPAQFPVLEEHRPLQKYMVWSDEMV
FT                   RTGEAQIHAHLIRPYVGIHLRIGSDWKNACAMLKDGTAGAHFMASPQCVGYSRHTTAPL
FT                   TMTMCLPDLKEIRRALKLWVTALNAQSVYIATDSESYLPEIQQLFKGKSLSFAVPKASE
FT                   MSLLLGDRKGK"
FT   3'UTR           1125..1460
FT                   /gene="pofut1"
XX
SQ   Sequence 1460 BP; 325 A; 435 C; 365 G; 335 T; 0 other;
     taggacgctc gcgctcttcc ttccctccca gtctccgcgc cgcggcgcgc tctggcactg        60
     gacccgctat gggcgccgcc gcgtgggcac cgtcgctctt gccgccgcgt gtgtctctcc       120
     tgctgctgct tttgccgctc ccggggctgc ccgtgggctc ctgggatccg gccggttacc       180
     tgctctactg cccatgcatg gggcgttttg ggaaccaggc tgatcatttc ttgggctccc       240
     tggcatttgc aaagctgttg aaccgcaccc tggctgtacc tccttggatt gagtaccagc       300
     atcacaagcc tcctttcacc aacgtccatg tgtcctacca gaagtacttc aagctggagc       360
     ccctccaggc ctaccatcga gtcatcagcc tggaggactt catggagaag ctggcaccca       420
     cccactggcc ccctgagaag cgggtggcat actgctttga ggtggcagcc cagcgaagtc       480
     ctgataagaa gacatgcccc atgaaggaag gaaatccctt tggcccattt tgggatcagt       540
     ttcatgtgag tttcaacaag tccgagcttt ttgcaggcat ttccttcagt gcctcctaca       600
     aagaccagtg gatccagaga ttttccccag aggaacatcc agtgcttgcc ctgcctggtg       660
     cccctgccca gttccctgtc ctggaggagc acaggcccct ccagaagtac atggtgtggt       720
     cagacgagat ggtgaggaca ggggaggccc agatccacgc ccacctcatc cggccctacg       780
     tgggcattca cctgcgcatt ggctctgact ggaaaaacgc gtgtgccatg ctgaaagatg       840
     gaaccgctgg cgcccacttc atggcctccc cacaatgcgt gggctacagc cgccacacca       900
     ccgccccgct caccatgacc atgtgcctcc ctgacctgaa ggaaattagg cgcgctctga       960
     agctctgggt gacagcgctg aacgcccaat cggtctacat tgccaccgac tctgagagtt      1020
     acctgcccga gatccagcag ctcttcaaag ggaagagcct gagttttgct gttccgaagg      1080
     catcagagat gtccttgctg ctcggggaca ggaaagggaa gtgatggacc ttcatcacac      1140
     tacaggcgac cttcctgatc cagggattga acctgcatct cctgcactgg gaggcaaatg      1200
     ctttaccgtt ggccacctag gaagccccat tctgctttcc caccagcagt gaatgagagc      1260
     tcccactgct tcatgttttc acccacattt ggtgttgtcg ctcttctgga tgttggccat      1320
     tctaataagt gtgtaatggt agctacttat tattcacaat aaatatagtt ctgcttacta      1380
     cataaaattt agaaaataca aaaagtgtta agaagaaaat aagaataaac tataatgcca      1440
     atatcaaaaa aaaaaaaaaa                                                  1460
//
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