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EBI Dbfetch

ID   AY338756; SV 1; linear; genomic DNA; STD; FUN; 2354 BP.
XX
AC   AY338756;
XX
DT   04-FEB-2004 (Rel. 78, Created)
DT   04-FEB-2004 (Rel. 78, Last updated, Version 1)
XX
DE   Coprinopsis cinerea strain AT8 laccase 1 (lcc1) gene, complete cds.
XX
KW   .
XX
OS   Coprinopsis cinerea
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis.
XX
RN   [1]
RP   1-2354
RX   DOI; 10.1007/s00294-003-0452-x
RX   PUBMED; 14600788.
RA   Hoegger P.J., Navarro-Gonzalez M., Kilaru S., Hoffmann M., Westbrook E.D.,
RA   Kues U.;
RT   "The laccase gene family in Coprinopsis cinerea (Coprinus cinereus)";
RL   Curr. Genet. 45(1):9-18(2004).
XX
RN   [2]
RP   1-2354
RA   Hoegger P.J., Kilaru S., Navarro-Gonzalez M., Hoffmann M., Westbrook E.D.,
RA   Kues U.;
RT   ;
RL   Submitted (09-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Wood Biotechnology, University of Goettingen, Buesgenweg 2,
RL   Goettingen 37077, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2354
FT                   /organism="Coprinopsis cinerea"
FT                   /strain="AT8"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:5346"
FT   gene            <107..>2177
FT                   /gene="lcc1"
FT   mRNA            join(<107..231,287..404,482..629,698..1078,1134..1621,
FT                   1703..1875,1929..1990,2053..>2177)
FT                   /gene="lcc1"
FT                   /product="laccase 1"
FT   CDS             join(107..231,287..404,482..629,698..1078,1134..1621,
FT                   1703..1875,1929..1990,2053..2177)
FT                   /codon_start=1
FT                   /gene="lcc1"
FT                   /product="laccase 1"
FT                   /EC_number="1.10.3.2"
FT                   /note="Lcc1"
FT                   /db_xref="GOA:Q9Y780"
FT                   /db_xref="InterPro:IPR001117"
FT                   /db_xref="InterPro:IPR002355"
FT                   /db_xref="InterPro:IPR008972"
FT                   /db_xref="InterPro:IPR011706"
FT                   /db_xref="InterPro:IPR011707"
FT                   /db_xref="PDB:1A65"
FT                   /db_xref="PDB:1HFU"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Y780"
FT                   /protein_id="AAR01241.1"
FT                   /translation="MFKNLLSFALLAISVANAQIVNSVDTMTLTNANVSPDGFTRAGIL
FT                   VNGVHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCP
FT                   ISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTI
FT                   ITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSC
FT                   DPNWQFSIDGHELTIIEVDGQLTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN
FT                   KGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDPAAPGIPTP
FT                   GAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQ
FT                   VVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRF
FT                   VTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDDLPPEATS
FT                   IQTVVRRAEPTGFSAKFRREGL"
XX
SQ   Sequence 2354 BP; 527 A; 669 C; 542 G; 616 T; 0 other;
     gcgaagaaac ctcagactac tctcgtcgtc tatcttcact catctgctcc cctctgctcg        60
     acagactctc ctcgacagcc tcgttgtacc agagaacaga gtaacaatgt tcaagaacct       120
     cctctcgttc gcccttctgg cgatcagcgt tgccaacgct cagatcgtca attctgtcga       180
     taccatgacc ctcaccaacg cgaacgtcag tcccgacggt ttcactcgag cgtaagtata       240
     tgtcttcagc acactgttga ttatccatta cctaccaact taacagtggt atcctcgtca       300
     atggagttca tggacctctt attcgaggtg gaaagaacga caactttgag ctcaacgtcg       360
     ttaacgactt ggacaacccc actatgcttc ggcctaccag tatcgtgagt tctacagaaa       420
     taaacactga tccatcatga tccagaacac tgacaacgtt ctgattttgg tttgcttgta       480
     gcattggcac ggtctcttcc aacgagggac taactgggct gatggtgcag atggtgtcaa       540
     ccagtgcccg atctctccag gccatgcttt cctctacaag ttcactccag ctggccacgc       600
     tggtactttc tggtaccatt cccactttgg taagcccgac cccccgacta tgatcatctt       660
     gactggagtc ctgattgatg tccaactaat ttactaggca cccaatactg cgatggtctc       720
     cgtggtccaa tggtcattta cgacgacaat gacccacacg ctgccctcta cgacgaggat       780
     gacgagaaca ccatcatcac cctcgccgat tggtaccata tccccgctcc ctccattcag       840
     ggtgctgccc agcctgacgc tacgctcatc aacggtaagg gtcgctacgt gggcggccca       900
     gctgccgagc tttcgatcgt caatgtcgag caagggaaga agtaccgaat gcgtttaatc       960
     tcgctgtcct gcgaccccaa ctggcagttc tccattgacg gacatgagtt gacgatcatt      1020
     gaagtcgatg gtcagcttac tgagccgcat acggttgatc gtctccagat cttcactggt      1080
     aagcattgaa atcggtgtgt tttcattgag aaagcacgct cacggtttat caggtcaaag      1140
     gtactccttc gttctcgacg ccaatcagcc ggtggacaac tactggatcc gtgctcagcc      1200
     caacaaaggt cgaaacggac ttgctggtac cttcgccaac ggtgtcaact cggccatcct      1260
     tcgctatgcc ggcgctgcca acgctgatcc aaccacctcc gccaacccca accccgccca      1320
     actcaacgaa gccgacctcc atgctctcat cgaccccgct gctcccggta tccccactcc      1380
     aggcgctgca gacgtcaacc tccgattcca gttgggcttc agcggcggtc gattcacgat      1440
     taacggaact gcgtacgaga gcccaagcgt tcctacgctc ttgcagatta tgagcggtgc      1500
     gcagagtgcg aatgacttgc tccctgctgg atcggtgtat gagttgccca ggaaccaagt      1560
     tgttgagctt gttgttcctg ctggtgtcct cggtggtcct catcctttcc atctccacgg      1620
     tgtacgtcaa gttctctttt ctcttctttt ttttcatggg tagtcaagtg tacatgagct      1680
     taccaaggat taaattgtgt agcatgcgtt cagcgtcgtc aggagtgcgg gaagcagcac      1740
     ctacaatttt gtcaaccccg tcaagcgcga tgttgttagt cttggtgtta ctggagacga      1800
     agttaccatt cgattcgtca ccgataaccc aggcccgtgg ttcttccatt gccacattga      1860
     attccatctc atgaagtaag tcttcatatc catcgttgta tactccagag tctaacccac      1920
     ctccacagcg gcttggcgat cgtctttgct gaagacatgg caaacacggt tgatgctaac      1980
     aacccacctg gtacgtcccc tcctattgac tcaaatacta atttccgaag ctaacttcgg      2040
     catcaattac agtcgagtgg gcccagcttt gcgagattta cgatgacctg ccgcctgagg      2100
     cgacctcgat tcaaaccgtt gtgcgtcgcg ctgagcccac cggcttttcg gccaagttcc      2160
     gcagggaggg cttgtagata atattatagt tgaccagagg gccagtggta ggaggctgct      2220
     atagtcaaag ttggtcacag agggaagagt tagtcgcaga ggagtcgttt gagtactact      2280
     agttattcat cgtgttgtta tttatcgtgg ttgttacata cttattaact atcgttatgt      2340
     gtgcttgagt ttgg                                                        2354
//


  
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