 |
|
EBI DbfetchID AY300923; SV 1; linear; genomic RNA; STD; VRL; 2590 BP. XX AC AY300923; XX DT 01-APR-2004 (Rel. 79, Created) DT 01-APR-2004 (Rel. 79, Last updated, Version 1) XX DE Bovine rotavirus A strain UKtc VP3 (3) gene, complete cds. XX KW . XX OS Bovine rotavirus A OC Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. XX RN [1] RP 1-2590 RX DOI; 10.1099/vir.0.19629-0 RX PUBMED; 15039535. RA Cook J.P., McCrae M.A.; RT "Sequence analysis of the guanylyltransferase (VP3) of group A RT rotaviruses"; RL J. Gen. Virol. 85(Pt 4):929-932(2004). XX RN [2] RP 1-2590 RA McCrae M.A., Cook J.P.; RT ; RL Submitted (19-MAY-2003) to the EMBL/GenBank/DDBJ databases. RL Biological Sciences, University of Warwick, Gibbett Hill, Coventry CV4 7AL, RL UK XX FH Key Location/Qualifiers FH FT source 1..2590 FT /organism="Bovine rotavirus A" FT /strain="UKtc" FT /mol_type="genomic RNA" FT /db_xref="taxon:35333" FT gene 50..2557 FT /gene="3" FT CDS 50..2557 FT /codon_start=1 FT /gene="3" FT /product="VP3" FT /db_xref="GOA:Q6WAT6" FT /db_xref="InterPro:IPR009697" FT /db_xref="InterPro:IPR011181" FT /db_xref="UniProtKB/Swiss-Prot:Q6WAT6" FT /protein_id="AAQ74387.1" FT /translation="MKVLALRHSVAQVYADTQIYIHDETKDDYENAFFISNLTTHNILY FT LNYSVKTLQILNKSGIAAVEIQKMDKLFTLIRCNFTYDYIDDVVYLHDYSYYTNNEIRT FT DQHWVTKTNIEDYLLPGWKLTYVGYNGNDTRGHYNFSFKCQNAATDDDAIIEYIYSNEL FT DFQNFILKKIKERMTTSLPIARLSNRVFRDKLFKTLVSDHSKIVNVGPRNESMFTFLDH FT PSIKQFSNGPYLVKDTIKLKQERWLGKRLSQFDIGQYKNYVKCINNLISIYDMYHEKPI FT IYMLGSAPSYWIHDVKQYSNLKFETWDPLDTPYSDLHHKELFYISDVTKLKDNSILYID FT IRTDRENADWKTWRKIVEEQTVNNLNIAYKYLSTGKAKVCCVKMTAMDLELPISAKLLH FT HPTTEIRSEFYLIMDIWDSKNIKRFIPKGVLYSYINNIITENVFIQQPFKLKTLRNEYV FT VALYALSNDFNNREDVIKLINNQKNALITVRINNTFKDEPKVGFKDIYDWTFLPTDFET FT NESIITSYDGCLGVFGLSISLASKPTGNNHLFMLSGTNKYFNMDQFANHMSISRRSHQI FT RFSESATSYSGYIFRDLSNNNFNLIGTNVENSVSGHVYNALIYYRYNYSFDLKRWIYLH FT STNKASIEGGRYYEHAPIELIYACRSAREFAKLQDDLTVLRYSNEIENYINKVYSITYA FT DDPNYFIGIKFKNIPYEYDVKVPHLTFGVLNISDSMVPDVVVILKKFKSELFRMDVTTS FT YTYMLSDEIYVANVSGVLSTYFKLYNAFYKEQITFGQSRMFIPHITLSFSNKKVVRIDS FT TRLNIDFIYLRKIKGDTVFDMAE" XX SQ Sequence 2590 BP; 972 A; 352 C; 461 G; 805 T; 0 other; ggctattaaa gcgatattag tagtgtgttt tacctctgat ggtgtaaaca tgaaagtatt 60 agctttaaga catagtgtgg ctcaggtgta tgcggacact caaatatata ttcatgatga 120 aactaaagat gactatgaaa atgcattttt catttctaat ctcactacac ataatatatt 180 atatctaaat tatagcgtta agacattgca aatattaaat aaatctggta tagctgcggt 240 agaaatacag aagatggata aattgtttac gttgattagg tgcaatttca catatgatta 300 tattgacgac gttgtttacc ttcatgacta ttcatattat actaataatg agataaggac 360 tgatcaacat tgggtaacta agacaaatat agaagattat ttattaccag gatggaaact 420 gacgtatgtt ggatataacg gaaatgacac aagagggcat tataacttct cttttaaatg 480 tcaaaatgca gctacagatg atgacgcaat aatagaatat atttactcaa atgaattaga 540 ctttcagaat ttcatactta aaaagatcaa ggaaaggatg acaacatcac tgccaatagc 600 gagactatca aatcgtgtgt tcagagacaa attatttaag acattagtat cagatcatag 660 taaaatagtt aatgttggac caaggaatga atctatgttt acttttctag atcatccatc 720 aataaagcag ttttcaaatg gaccctattt agttaaggat acgataaagc ttaaacaaga 780 gagatggctc ggtaagagac tgtcacaatt cgacatcggt cagtataaaa actatgttaa 840 atgtattaac aaccttatat caatatatga catgtatcat gagaagccaa taatctacat 900 gttaggatca gcaccttcat attggataca cgatgtaaaa caatactcta atctaaaatt 960 tgagacgtgg gacccattgg atacaccata ctctgattta catcataaag aactgtttta 1020 tataagtgac gtaaccaaac ttaaagataa ttcgatatta tatatagata tacgaacgga 1080 tagagaaaat gcagattgga aaacgtggag gaagattgta gaagagcaga ccgttaacaa 1140 tttgaatatc gcatacaaat acttatccac agggaaagct aaagtatgtt gtgttaaaat 1200 gactgctatg gatttagaac taccgatatc tgcgaaacta ctacaccacc caactacaga 1260 aattagatca gaattttatt taataatgga tatatgggat tctaaaaata tcaagcgatt 1320 tataccaaaa ggcgtgttat attcatacat aaataatata attactgaaa acgtgtttat 1380 acaacaaccg tttaaattga aaacattaag gaatgagtat gtggttgcat tgtacgcgct 1440 gtctaacgat tttaacaata gagaggatgt aattaaattg attaataatc agaagaatgc 1500 gctaataact gtaagaatta ataatacatt taaagatgaa ccaaaagtag ggtttaaaga 1560 tatttatgat tggacttttt tgccaactga ttttgaaacg aatgagtcaa taattacgtc 1620 atatgatggt tgtctaggtg tgtttggttt atcaatatca ttagcctcaa aaccaactgg 1680 aaataatcat ctgttcatgt taagtggtac taataaatat tttaatatgg atcaatttgc 1740 taatcatatg agtatatcaa gacggtcgca tcaaatacga ttttcggaat cagcgacttc 1800 gtattcaggt tacattttta gagatttatc aaataataat tttaatttaa taggtacgaa 1860 tgttgagaat tcggtatctg gacatgtgta taatgcattg atttattata gatataatta 1920 ttcatttgat cttaagcgat ggatatattt acattcaaca aacaaggcca gtattgaagg 1980 cggcagatat tatgaacacg ctccgataga gttgatttac gcatgtagat cggcaaggga 2040 attcgcaaag ttgcaagacg atttgacggt attaagatat tcaaatgaaa tagaaaacta 2100 cattaataaa gtgtatagta taacatatgc cgacgatccg aactatttta ttggaatcaa 2160 gtttaaaaat ataccatatg aatatgatgt taaagtacca catcttacat ttggcgtatt 2220 aaatatttca gattctatgg tgccggatgt agtagtaatt ttaaagaaat ttaaaagtga 2280 attgtttaga atggatgtaa caacgagtta tacgtatatg ttatcagacg aaatctatgt 2340 agcaaacgta agcggcgtgt tatcaacata ttttaagctt tacaatgcat tctataaaga 2400 gcaaattacg ttcggacaat caagaatgtt tattccacac ataacattaa gtttcagtaa 2460 caagaaagta gtgagaatag atagtacgcg attgaacata gactttatat atttgaggaa 2520 aataaaaggc gatacagtgt tcgatatggc tgagtgagct aaaaacttaa cacactggtc 2580 agatgtgacc 2590 // |
|