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EBI DbfetchID AY277923; SV 1; linear; genomic RNA; STD; VRL; 2582 BP. XX AC AY277923; XX DT 01-APR-2004 (Rel. 79, Created) DT 01-APR-2004 (Rel. 79, Last updated, Version 1) XX DE Avian rotavirus A VP3 gene, complete cds. XX KW . XX OS Avian rotavirus A OC Viruses; dsRNA viruses; Reoviridae; Rotavirus; Rotavirus A. XX RN [1] RP 1-2582 RX DOI; 10.1099/vir.0.19629-0 RX PUBMED; 15039535. RA Cook J.P., McCrae M.A.; RT "Sequence analysis of the guanylyltransferase (VP3) of group A RT rotaviruses"; RL J. Gen. Virol. 85(Pt 4):929-932(2004). XX RN [2] RP 1-2582 RA Cook J.P., McCrae M.A.; RT ; RL Submitted (16-APR-2003) to the EMBL/GenBank/DDBJ databases. RL Biological Sciences, University of Warwick, Gibbett Hill, Coventry CV4 7AL, RL UK XX FH Key Location/Qualifiers FH FT source 1..2582 FT /organism="Avian rotavirus A" FT /strain="CH2" FT /mol_type="genomic RNA" FT /db_xref="taxon:31563" FT CDS 50..2539 FT /codon_start=1 FT /product="VP3" FT /db_xref="GOA:Q6WNV6" FT /db_xref="InterPro:IPR009697" FT /db_xref="UniProtKB/Swiss-Prot:Q6WNV6" FT /protein_id="AAQ21050.1" FT /translation="MKVIALRRDLVSSYADTQVYEHDVDKDYYENAYLISNITAHNVLY FT VDYSIQVIEILNKSGIASLIAINKDKLEILIKSNYTYDYYKNIVYLHDYSYYNLNELRT FT DQYWLTTTNIEEYILPGWKLTYVGQLGIKTRGHYTYSFICQNTATDDDIIYDYIYSNEV FT DFLPFLLQALNKRLTTAVNFHRLSNRIFREYLYSKVPKDTINIGPRNESMFTLLRYPYI FT TNYAANEFKVSDLIRLTQEKWIGAENSQFDIGQFKNMCNVLSTIYYYYNKYHAYPRIYM FT LGSAPSYWLYDLLQVYNFDIETWDPLDTPFSKRHHKAMFAISDTEKLSDNSILYIDIRS FT DRNGADWREWRQRVEDETKINLEIMRKYLQRGKTRICCCKITAMDIELPATSILLHFPT FT TKIQSECYVICTQEMLQDKKRFVPKGAFYSFINNTKTDNVFVSPVYKVKPTNKFVVALY FT SLSNENNDRDKVIDFTQKQKRGIITLRMNNTFNYEYRLQFKSTYDYLYLPSEVSREGTI FT VTSYDGYIAMHNLSLSLESKATGNNHLFISFSDANYGQIDSYCTHMGISRRSHSVRFSE FT AATTLSGYMFRDITNGKFNLINTNVENAVSGHVYNALVYFRYNYRFDLLRWINLHAKDE FT VMIQGGRYYEHAPPELLYACQSALVFAKLQNDLTLIEYVNSVNRYILNKYNLKYADDPN FT YYIHIDFVDLPFKYTVPDPHLTGGLLFLNDFDIQNTITILRSVKEDLIALNLLTQYTYM FT LTDSIYVANVDGYLQFYYKLYMKFYRKQIVFGQSRMFLPHITLSKEKKKPVRIDATKLV FT IKSIKLRKIKSDVEYCI" XX SQ Sequence 2582 BP; 927 A; 387 C; 439 G; 829 T; 0 other; ggctattaaa gcagtactag tagtgcgtct tactcttagt ggtgtagaca tgaaagtgat 60 agctttaaga cgcgacctgg tctcatcata tgcagatact caagtctacg aacatgacgt 120 tgacaaagat tattacgaaa acgcctattt aatttcaaat ataacggcac ataacgtttt 180 atatgttgac tactcgatac aagtaattga gatacttaac aaatcaggaa ttgcatcact 240 tatagctatc aacaaagata agctggaaat tttaataaaa tctaattata cttatgacta 300 ttataagaat attgtttatt tgcatgatta ttcatactac aacctgaatg aattacgtac 360 cgatcaatat tggttaacaa ctacaaatat tgaagaatat attttgcctg gttggaagtt 420 gacgtatgtc ggtcaactag gtattaaaac tagaggtcat tatacctata gctttatatg 480 tcaaaatact gctactgatg acgatattat atatgattac atttattcta atgaagttga 540 ttttttgcct tttctgcttc aagcattgaa taaaagattg actacagcgg tgaatttcca 600 cagactatca aatagaatat ttagagaata tttgtattca aaagtgccaa aagatactat 660 taacattgga ccaagaaatg aatccatgtt cacactgctt cgttatccat acataacgaa 720 ttatgcagcc aatgaattta aagtatctga cttaataaga cttactcaag agaagtggat 780 tggagctgag aattcacaat ttgatattgg acagtttaaa aatatgtgca atgtgttatc 840 aaccatctat tattactaca ataaatatca tgcataccct cggatataca tgctcggttc 900 agcaccatca tattggctgt acgatttgtt gcaggtatat aattttgaca ttgaaacgtg 960 ggatccattg gatacaccat tttcgaaacg gcatcataaa gctatgtttg caatatccga 1020 cacagagaaa ctaagtgata attcaatcct ttatattgat ataaggtcgg atagaaatgg 1080 cgctgattgg agagaatgga gacagcgtgt agaagatgag acaaagatta atttagaaat 1140 aatgcgtaaa tacctgcaac gtggaaaaac cagaatttgt tgctgtaaaa ttactgctat 1200 ggatattgaa cttccagcca catctatact actacatttc cctacaacaa agatacagtc 1260 agaatgttat gttatatgta cgcaagaaat gttgcaagat aagaaaagat ttgtaccgaa 1320 aggagctttt tattcattta ttaacaatac taaaactgat aatgtttttg ttagtccggt 1380 ctataaggta aagccaacta ataagtttgt tgttgcactg tattcattgt cgaatgagaa 1440 taatgatagg gataaagtaa tagattttac gcaaaaacaa aagagaggta tcatcacatt 1500 aaggatgaat aatactttca actatgaata cagattgcag ttcaaatcaa cgtatgatta 1560 tttatatttg ccatctgaag tgtcacgtga aggaactata gtcacgtcat atgatggata 1620 catagcgatg cataatcttt ctctatcatt agaaagtaaa gctacaggaa ataatcactt 1680 atttatttca ttttctgacg cgaactatgg tcagattgat tcatactgta ctcatatggg 1740 tatatcgagg agatcacact cagtccggtt ttcagaagca gctacaactc tgtccggtta 1800 catgtttaga gatataacta atggcaaatt taatttaatt aatacaaatg tagaaaatgc 1860 agtatctggg catgtttata atgctttagt gtattttaga tacaattaca gatttgattt 1920 attgagatgg ataaatttac atgcaaagga tgaagtcatg atacagggag gtagatatta 1980 tgaacatgct ccaccagagt tattatatgc atgtcaatcg gcattagtat ttgcaaaatt 2040 gcaaaatgat ttaacgctaa tagaatatgt gaacagtgta aatcgttata ttttaaataa 2100 atacaatctt aaatacgccg atgatccgaa ttactatata catatcgatt ttgttgattt 2160 gccttttaaa tatactgtac ccgacccaca cttgactgga ggattgttgt ttttaaatga 2220 ctttgacatt caaaatacaa taacaatatt aagatcagtt aaagaagatt taatagcact 2280 caatttatta actcaataca catatatgtt gactgactca atctatgtag cgaatgtcga 2340 tggctattta caattctatt ataagttata tatgaaattc tatcgcaaac aaatagtatt 2400 cgggcagtca aggatgtttc tgcctcatat aactttatct aaagagaaaa agaaacctgt 2460 gcgtatagat gctactaaac ttgtaattaa atcaattaaa ttacggaaaa ttaaatcaga 2520 cgttgagtat tgcatataga tgagatagga taaaaactta acacactagt catgatgtga 2580 cc 2582 // |
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