spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY271795; SV 1; linear; genomic RNA; STD; VRL; 1410 BP.
XX
AC   AY271795;
XX
DT   06-MAY-2003 (Rel. 75, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Influenza A virus (A/Memphis/31/98(H3N2)) neuraminidase gene, complete cds.
XX
KW   .
XX
OS   Influenza A virus (A/Memphis/31/98(H3N2))
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
XX
RN   [1]
RP   1-1410
RX   DOI; 10.1128/JVI.76.23.12274-12280.2002
RX   PUBMED; 12414967.
RA   Gulati U., Hwang C.C., Venkatramani L., Gulati S., Stray S.J., Lee J.T.,
RA   Laver W.G., Bochkarev A., Zlotnick A., Air G.M.;
RT   "Antibody epitopes on the neuraminidase of a recent H3N2 influenza virus
RT   (A/Memphis/31/98)";
RL   J. Virol. 76(23):12274-12280(2002).
XX
RN   [2]
RP   1-1410
RA   Gulati U., Air G.M.;
RT   ;
RL   Submitted (07-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Biochem & Mol Biol, University of Oklahoma Health Sciences Center, 940 SL
RL   Young Blvd, Oklahoma City, OK 73190, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1410
FT                   /organism="Influenza A virus (A/Memphis/31/98(H3N2))"
FT                   /segment="6"
FT                   /isolate="A/Memphis/31/98 (H3N2)"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:228928"
FT   CDS             1..1410
FT                   /codon_start=1
FT                   /product="neuraminidase"
FT                   /EC_number="3.2.1.18"
FT                   /db_xref="GOA:Q80DL0"
FT                   /db_xref="InterPro:IPR013032"
FT                   /db_xref="PDB:2AEQ"
FT                   /db_xref="UniProtKB/TrEMBL:Q80DL0"
FT                   /protein_id="AAP23239.1"
FT                   /translation="MNPNQKIITIGSVSLTIATICFLMQIAILVTTVTLHFKQYECSSP
FT                   PNNQVMLCEPTIIERNITEIVYLTNTTIEKEICPKLAEYRNWSKPQCKITGFAPFSKDN
FT                   SIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNRHSNDTVHDRTPYRTLLMNEL
FT                   GVPFHLGTKQVCIAWSSSSCHDGKAWLHVCVTGHDENATASFIYDGRLVDSIGSWSKKI
FT                   LRTQESECVCINGTCTVVMTDGSASGRADTKILFIEEGKIVHISPLSGSAQHVEECSCY
FT                   PRYPGVRCVCRDNWKGSNRPIVDINVKDYSIVSSYVCSGLVGDTPRKNDSSSSSHCLNP
FT                   NNEEGGHGVKGWAFDDGNDVWMGRTISEKFRSGYETFKVIEGWSKPNSKLQINRQVIVD
FT                   RGNRSGYSGIFSVEGKSCINRCFYVELIRGRKQETEVWWTSNSIVVFCGTSGTYGTGSW
FT                   PDGADINLMPI"
XX
SQ   Sequence 1410 BP; 436 A; 273 C; 338 G; 363 T; 0 other;
     atgaatccaa atcaaaagat aataacgatt ggctctgttt ctctcactat tgccacaata        60
     tgcttcctca tgcaaattgc catcctggta accactgtaa cattgcattt caagcaatat       120
     gaatgcagct ctcccccaaa caaccaagta atgctgtgtg aaccaacaat aatagaaaga       180
     aacataacag agatagtgta tctgaccaac accaccatag agaaggaaat atgccccaaa       240
     ctagcagaat acagaaattg gtcaaagccg caatgtaaaa ttacaggatt tgcacctttt       300
     tctaaggaca attcaattcg gctttccgct ggtggggaca tttgggtgac aagggaacct       360
     tatgtgtcat gcgatcctga caagtgttat caatttgccc ttggacaggg aacaacacta       420
     aacaacaggc attcaaatga cacagtgcat gataggaccc cttatcgaac cctattgatg       480
     aatgagttgg gtgttccatt tcatttggga accaagcaag tgtgcatagc ttggtccagc       540
     tcaagttgtc acgatggaaa agcatggctg catgtttgtg taactgggca tgatgaaaat       600
     gcaactgcta gcttcattta cgatgggagg cttgtagata gtattggttc atggtccaaa       660
     aaaatcctca ggacccagga gtcggaatgc gtttgtatca atggaacttg tacagtagta       720
     atgactgatg ggagtgcttc aggaagagct gatactaaaa tactattcat tgaggagggg       780
     aaaatcgttc atatcagccc actgtcagga agtgctcagc atgtcgagga atgctcctgt       840
     tatcctcgat atcctggtgt cagatgtgtc tgcagagaca actggaaagg ctccaatagg       900
     cccatcgtag atataaatgt aaaggattat agcattgttt ccagttatgt gtgctcagga       960
     cttgttggag acacacccag aaaaaacgac agctccagca gtagtcattg cctgaatcct      1020
     aacaatgagg aagggggtca tggagtgaaa ggctgggcct ttgatgatgg aaatgacgtg      1080
     tggatgggaa gaacgatcag cgaaaagttc cgctcaggtt atgaaacctt caaagtcatt      1140
     gaaggctggt ccaaacctaa ctccaaattg cagataaata ggcaagtcat agttgacaga      1200
     ggtaataggt ccggttattc tggtattttc tctgttgaag gcaaaagctg catcaatcgg      1260
     tgcttttatg tggagttgat aaggggaagg aaacaggaaa ctgaagtctg gtggacctca      1320
     aacagtattg ttgtgttttg tggcacatca ggtacatatg gaacaggctc atggcctgat      1380
     ggggcggaca tcaatctcat gcctatataa                                       1410
//
spacer
spacer