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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY251645; SV 1; linear; genomic DNA; STD; PRO; 1293 BP.
XX
AC   AY251645;
XX
DT   02-JUL-2003 (Rel. 76, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Treponema pectinovorum pectate lyase A (pelA) gene, complete cds.
XX
KW   .
XX
OS   Treponema pectinovorum
OC   Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.
XX
RN   [1]
RP   1-1293
RX   DOI; 10.1016/S0378-1097(03)00639-6
RX   PUBMED; 14553937.
RA   Walker S.G., Ryan M.E.;
RT   "Cloning and expression of a pectate lyase from the oral spirochete
RT   Treponema pectinovorum ATCC 33768";
RL   FEMS Microbiol. Lett. 226(2):385-390(2003).
XX
RN   [2]
RP   1-1293
RA   Walker S.G.;
RT   ;
RL   Submitted (09-MAR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Oral Biology and Pathology, SUNY at Stony Brook, School of Dental Medicine,
RL   Stony Brook, NY 11794-8702, USA
XX
DR   StrainInfo; 109759; ATCC 33768.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1293
FT                   /organism="Treponema pectinovorum"
FT                   /strain="ATCC 33768"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:164"
FT   gene            1..1293
FT                   /gene="pelA"
FT   CDS             1..1293
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pelA"
FT                   /product="pectate lyase A"
FT                   /db_xref="GOA:Q7X0P2"
FT                   /db_xref="HSSP:1GXM"
FT                   /db_xref="InterPro:IPR012669"
FT                   /db_xref="UniProtKB/TrEMBL:Q7X0P2"
FT                   /protein_id="AAP41854.1"
FT                   /translation="MKNINFLMVLAILLSSRVVSSQNFEQEEFFKLTSKSYNAIDIKDF
FT                   SDGFNHARYSYPNSIPPWSLYNEDNILGFAENMIYTQNPDGGWAKNLDLQRIYTIQELK
FT                   QIREQNKNVPPVTYGLKTSSNASTMDNGNIHSQIKYLCQVYQQVKDDKSIDSKRYLDCA
FT                   TKALTWIFNAQHPVSGGFTGADVYAITYNDNVMTNSLTLLKDISNGKDYFCVFPEETRQ
FT                   KAKSAYERGIECILKTQITLTLDDGTKILTAWCQQHNHETLKPVWAREFEPPSVCSFES
FT                   FKVLRFLMTEENPTPEIKKAIIAGCEFFDRNDVKIFGKKLVATKLASPRKENGRTYNTD
FT                   KTLQDSDPSDVLWARFYALDSSFDVVSGARKPIVGTYPSVLKPIWCDRGCKYVDSFNEL
FT                   SFERRNGYGYTTTSGRSLSSVYSAWKAKHEL"
XX
SQ   Sequence 1293 BP; 437 A; 232 C; 250 G; 374 T; 0 other;
     atgaaaaata ttaatttttt aatggtttta gcgatattat tgagcagtcg tgttgtctca        60
     tcgcagaatt ttgagcaaga agagtttttt aaactaacat caaaatcata caatgctata       120
     gacataaaag attttagcga cggttttaat catgcacgct attcgtatcc aaattcaatt       180
     cctccttggt ctttatataa cgaagataat atattgggtt ttgcagaaaa tatgatttac       240
     actcaaaatc cagatggagg ttgggcaaaa aatctcgatc ttcagcgcat atacacgatt       300
     caagaattaa agcagattcg agagcaaaat aaaaatgttc ctcctgtaac ctacggttta       360
     aaaacttctt caaatgcgag cacgatggat aacggcaaca tccattcgca gataaaatat       420
     ctttgtcagg tttaccagca ggtaaaagac gataaaagta tcgattcaaa acgctatctt       480
     gactgtgcaa caaaggcttt aacctggatt tttaacgctc agcatcctgt tagcggtggc       540
     tttactggtg cagatgttta tgcaatcact tataacgaca acgttatgac caatagcctt       600
     acacttttaa aagatatttc caatggaaaa gattattttt gcgttttccc agaagaaaca       660
     aggcaaaagg caaaatcagc gtacgagaga ggaattgaat gcatcttaaa aactcagatt       720
     acgcttacct tagacgatgg aacaaaaata ttaacggcgt ggtgccagca gcataaccac       780
     gaaactttaa aacctgtttg ggcaagagaa tttgaaccac cttctgtatg ctcttttgaa       840
     agttttaaag ttttaagatt tttgatgaca gaagaaaacc caaccccaga aataaaaaaa       900
     gcgataatcg caggctgtga attttttgac cgcaatgatg taaaaatttt tggcaaaaag       960
     cttgtggcaa caaaacttgc atcgcctcgt aaagaaaacg gtagaactta taacacggac      1020
     aaaacattgc aggattcaga tccaagcgat gtgctttggg caaggtttta cgctttagat      1080
     tcttcttttg atgttgtaag cggagccaga aagcccatcg ttggaactta tccttctgtt      1140
     ttaaaaccta tttggtgcga cagaggctgt aaatatgtag actcgtttaa tgaactttct      1200
     tttgaaaggc gaaacggcta tggctacacc acaacttctg gacgcagttt gagcagtgtg      1260
     tattctgctt ggaaggcaaa acacgaactt tga                                   1293
//
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