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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY236961; SV 1; linear; genomic DNA; STD; PRO; 1023 BP.
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AC   AY236961;
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DT   02-SEP-2003 (Rel. 77, Created)
DT   06-NOV-2007 (Rel. 93, Last updated, Version 3)
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DE   Lactococcus lactis LdhB (ldhB) gene, complete cds.
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KW   .
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OS   Lactococcus lactis
OC   Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Lactococcus.
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RN   [1]
RP   1-1023
RX   DOI; 10.1111/j.1742-4658.2007.06115.x
RX   PUBMED; 17944947.
RA   Gaspar P., Neves A.R., Shearman C.A., Gasson M.J., Baptista A.M.,
RA   Turner D.L., Soares C.M., Santos H.;
RT   "The lactate dehydrogenases encoded by the ldh and ldhB genes in
RT   Lactococcus lactis exhibit distinct regulation and catalytic properties -
RT   comparative modeling to probe the molecular basis";
RL   FEBS J. 274(22):5924-5936(2007).
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RN   [2]
RP   1-1023
RA   Gaspar P., Coelho P., Neves A.R., Shearman C.A., Gasson M.J., Soares C.M.,
RA   Baptisa A.M., Ramos A., Santos H.;
RT   "Characterization of a lactate dehydrogenase encoded by the ldhB gene of
RT   Lactococcus lactis";
RL   Unpublished.
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RN   [3]
RP   1-1023
RA   Shearman C.A., Gasson M.J.;
RT   ;
RL   Submitted (14-FEB-2003) to the EMBL/GenBank/DDBJ databases.
RL   Food Safety Science Divsion, Institute of Food Research, Norwich Research
RL   Park, Norwich NR4 7UA, U.K.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1023
FT                   /organism="Lactococcus lactis"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1358"
FT   gene            36..980
FT                   /gene="ldhB"
FT   CDS             36..980
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ldhB"
FT                   /product="LdhB"
FT                   /note="lactate dehydrogenase"
FT                   /db_xref="GOA:P0C2T6"
FT                   /db_xref="InterPro:IPR001236"
FT                   /db_xref="InterPro:IPR001557"
FT                   /db_xref="InterPro:IPR011304"
FT                   /db_xref="InterPro:IPR015955"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="InterPro:IPR018177"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0C2T6"
FT                   /protein_id="AAP49572.1"
FT                   /translation="MKITSRKVVVIGTGFVGTSIAYSMINQGLVNELVLIDVNQDKAEG
FT                   EALDLLDGISWAQENVIVRAGNYKDCENADIVVITAGVNQKPGQSRLDLVNTNAKIMRS
FT                   IVTQVMDSGFDGIFVIASNPVDILTYVAWETSGLDQSRIVGTGTTLDTTRFRKELATKL
FT                   EIDPRSVHGYIIGEHGDSEVAVWSHTTIGGKPILEFIVKNKKIGLEDLSNLSNKVKNAA
FT                   YEIIDKKQATYYGIGMSTARIVKAILNNEQVILPVSAYLRGEYGQEGVFTGVPSVVNQN
FT                   GVREIIELNIDAYEMKQFEKSVSQLKEVIESIK"
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SQ   Sequence 1023 BP; 356 A; 138 C; 211 G; 318 T; 0 other;
     atattgatta ataaaaaatc gaaaaggaga taaaaatgaa aattacaagt agaaaagtag        60
     tcgtgattgg aacaggattt gtcggaacaa gtattgctta ttcaatgatt aatcaagggc       120
     ttgtcaacga gttagttttg atagatgtca atcaagataa agctgagggt gaggctttag       180
     atttattgga tggcatatct tgggctcaag aaaatgttat tgtaagagct ggaaattaca       240
     aggattgtga aaatgcagat attgtcgtga ttacagctgg tgtgaaccaa aaacccggac       300
     aatcacgttt agatttggtc aatacaaatg ctaaaattat gcgctcaatc gttactcaag       360
     ttatggattc aggttttgat ggtatttttg taattgcttc taatcctgtg gatatcctta       420
     cctatgtcgc ttgggaaact tctggtcttg accaatctag aattgtcgga actggtacaa       480
     ctttggatac cacacgtttt agaaaagaat tggccacaaa actagaaatt gaccctcgga       540
     gtgttcacgg atatattatt ggtgagcatg gcgattctga agttgcagtt tggtcacaca       600
     ctacgatagg tggaaaacct attcttgaat ttattgttaa aaataaaaaa attggtcttg       660
     aagatttgtc taatttgtca aataaggtta aaaatgctgc ttatgaaatt attgataaaa       720
     aacaagccac ttattacgga attggaatga gcacagctag aattgtcaaa gccatattaa       780
     ataatgaaca agtcattcta ccagtttctg cctatttgcg tggagaatat ggtcaagaag       840
     gggtctttac tggtgttcca tctgtcgtaa atcaaaatgg tgtcagagaa attattgaac       900
     tcaatattga tgcttatgaa atgaaacaat ttgaaaagtc tgtcagtcaa cttaaagaag       960
     tcatagaatc tattaaataa tctagttagg ttttacaata gtaaaggaaa ataaaatgat      1020
     cgc                                                                    1023
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