EBI Dbfetch

ID   AY230155; SV 1; linear; genomic DNA; STD; PRO; 1482 BP.
XX
AC   AY230155;
XX
DT   23-JUL-2003 (Rel. 76, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Lactococcus lactis RlrD (rlrD) gene, partial cds; and alternative lactate
DE   dehydrogenase (ldhB) gene, complete cds.
XX
KW   .
XX
OS   Lactococcus lactis
OC   Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Lactococcus.
XX
RN   [1]
RP   1-1482
RX   DOI; 10.1128/JB.185.15.4499-4507.2003
RX   PUBMED; 12867459.
RA   Bongers R.S., Hoefnagel M.H.N., Starrenburg M.J.C., Siemerink M.A.J.,
RA   Arends J.G.A., Hugenholtz J., Kleerebezem M.;
RT   "IS981-mediated adaptive evolution recovers lactate production by ldhB
RT   transcription activation in a lactate dehydrogenase-deficient strain of
RT   Lactococcus lactis";
RL   J. Bacteriol. 185(15):4499-4507(2003).
XX
RN   [2]
RP   1-1482
RA   Bongers R.S., Hoefnagel M.H.N., Starrenburg M.J.C., Siemerink M.A.J.,
RA   Arends J.G.A., Hugenholtz J., Kleerebezem M.;
RT   ;
RL   Submitted (05-FEB-2003) to the EMBL/GenBank/DDBJ databases.
RL   FNI, NIZO Food Research, Kernhemseweg 2, Ede, Gelderland 6718 ZB, The
RL   Netherlands
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FH   Key             Location/Qualifiers
FH
FT   source          1..1482
FT                   /organism="Lactococcus lactis"
FT                   /strain="MG1363"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1358"
FT   gene            <1..222
FT                   /gene="rlrD"
FT   CDS             <1..222
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="rlrD"
FT                   /product="RlrD"
FT                   /note="hypothetical LysR-type transcription regulator;
FT                   similar to rlrD of Lactococcus lactis subsp. lactis strain
FT                   IL1403"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WYP7"
FT                   /protein_id="AAO60055.1"
FT                   /translation="NIVRMNSNEMIISHIKAGLGSSLISKSFLSDDIPYQELGSNYHRE
FT                   FLGVSFDEEKDPVIQKLINKIKKETEIR"
FT   gene            537..1481
FT                   /gene="ldhB"
FT   CDS             537..1481
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ldhB"
FT                   /product="alternative lactate dehydrogenase"
FT                   /note="LdhB"
FT                   /db_xref="GOA:A2RIA3"
FT                   /db_xref="InterPro:IPR001236"
FT                   /db_xref="InterPro:IPR001557"
FT                   /db_xref="InterPro:IPR011304"
FT                   /db_xref="InterPro:IPR015955"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="InterPro:IPR018177"
FT                   /db_xref="UniProtKB/Swiss-Prot:A2RIA3"
FT                   /protein_id="AAO60056.1"
FT                   /translation="MKITSRKVVVIGTGFVGTSIAYSMINQGLVNELVLIDVNQDKAEG
FT                   EALDLLDGISWAQENVIVRAGNYKDCENADIVVITAGVNQKPGQSRLDLVNTNAKIMRS
FT                   IVTQVMDSGFDGIFVIASNPVDILTYVAWETSGLDQSRIVGTGTTLDTTRFRKELATKL
FT                   EIDPRSVHGYIIGEHGDSEVAVWSHTTIGGKPILEFIVKNKKIGLEDLSNLSNKVKNAA
FT                   YEIIDKKQATYYGIGMSTARIVKAILNNEQVILPVSAYLRGEYGQEGVFTGVPSVVNQN
FT                   GVREIIELNIDAYEMKQFEKSVSQLKEVIESIK"
XX
SQ   Sequence 1482 BP; 530 A; 181 C; 275 G; 496 T; 0 other;
     aacattgttc gtatgaatag caatgagatg attatttctc atatcaaagc tggtttaggt        60
     tcttctttga tttctaaatc ctttttatct gatgatattc cttatcaaga acttggaagt       120
     aattatcata gagagttttt gggagtttct tttgatgaag aaaaagaccc cgtgattcaa       180
     aaattaatta ataaaataaa aaaagaaacc gaaattcgtt agaaataata aaaataagaa       240
     acagaagcaa gctgcttctg cttttttgtt tttattattt tttttaatca taatgataaa       300
     ataaattcat tttacacatt gtaaaaatat agataaaata ataatagatt ttataaagga       360
     catcagaaaa ttactttaaa gggggactag aattggcttt tataatcatt agttttgtga       420
     tttctatcat tttaatttta tgcactatga ttagttatct atggattttt aacagatagg       480
     ttttataaaa atatagaaaa aatattgatt aataaaaaat cgaaaaggag ataaaaatga       540
     aaattacaag tagaaaagta gtcgtgattg gaacaggatt tgtcggaaca agtattgctt       600
     attcaatgat taatcaaggg cttgtcaacg agttagtttt gatagatgtc aatcaagata       660
     aagctgaggg tgaggcttta gatttattgg atggcatatc ttgggctcaa gaaaatgtta       720
     ttgtaagagc tggaaattac aaggattgtg aaaatgcaga tattgtcgtg attacagctg       780
     gtgtgaacca aaaaccagga caatcacgtt tagatttggt caatacaaat gctaaaatta       840
     tgcgctcaat cgttactcaa gttatggatt caggttttga tggtattttt gtaattgctt       900
     ctaatcctgt ggatatcctt acctatgtcg cttgggaaac ttctggtctt gaccaatcta       960
     gaattgtcgg aactggtaca actttggata ccacacgttt tagaaaagaa ttggccacaa      1020
     aactagaaat tgaccctcgg agtgttcacg gatatattat tggtgagcat ggcgattctg      1080
     aagttgcagt ttggtcacac actacgatag gtggaaaacc tattcttgaa tttattgtta      1140
     aaaataaaaa aattggtctt gaagatttgt ctaatttgtc aaataaggtt aaaaatgctg      1200
     cttatgaaat tattgataaa aaacaagcca cttattacgg aattggaatg agcacagcta      1260
     gaattgtcaa agccatatta aataatgaac aagtcattct accagtttct gcctatttgc      1320
     gtggagaata tggtcaagaa ggggtcttta ctggtgttcc atctgtcgta aatcaaaatg      1380
     gtgtcagaga aattattgaa ctcaatattg atgcttatga aatgaaacaa tttgaaaagt      1440
     ctgtcagtca acttaaagag gtaatagaat ctattaagta aa                         1482
//