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EBI DbfetchID AY216504; SV 2; linear; genomic RNA; STD; VRL; 7081 BP. XX AC AY216504; XX DT 05-JAN-2004 (Rel. 78, Created) DT 15-AUG-2008 (Rel. 96, Last updated, Version 3) XX DE Guanarito virus strain INH-95551 segment L, complete sequence. XX KW . XX OS Guanarito virus OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus; OC New world arenaviruses. XX RN [1] RP 1-7081 RX DOI; 10.1016/j.virol.2003.08.016 RX PUBMED; 14698659. RA Charrel R.N., Lemasson J.J., Garbutt M., Khelifa R., De Micco P., RA Feldmann H., de Lamballerie X.; RT "New insights into the evolutionary relationships between arenaviruses RT provided by comparative analysis of small and large segment sequences"; RL Virology 317(2):191-196(2003). XX RN [2] RP 1-7081 RX DOI; 10.1016/j.mib.2008.06.001 RX PUBMED; 18602020. RA Charrel R.N., de Lamballerie X., Emonet S.; RT "Phylogeny of the genus Arenavirus"; RL Curr. Opin. Microbiol. 11(4):362-368(2008). XX RN [3] RP 1-7081 RA Emonet S., de Lamballerie X., de Micco P., Charrel R.N.; RT "Complete sequence determination and analysis of the large RNA segment of RT arenaviruses"; RL Unpublished. XX RN [4] RP 1-7081 RA Charrel R.N., Lemasson J.-J., Garbutt M., Khelifa R., De Micco P., RA Feldmann H., de Lamballerie X.; RT ; RL Submitted (09-JAN-2003) to the EMBL/GenBank/DDBJ databases. RL Unite des Virus Emergents (EA3292, IFR48, IRD UR034), Universite de la RL Mediterranee, Faculte de Medecine, 27 Blvd Jean Moulin, Marseille 13005, RL France XX RN [5] RC Sequence update by submitter RP 1-7081 RA Emonet S., de Lamballerie X., de Micco P., Charrel R.N.; RT ; RL Submitted (10-MAY-2004) to the EMBL/GenBank/DDBJ databases. RL Unite des Virus Emergents (EA3292, IFR48, IRD UR034), Universite de la RL Mediterranee, Faculte de Medecine, 27 Blvd Jean Moulin, Marseille 13005, RL France XX CC On Jan 9, 2008 this sequence version replaced gi:37787701. XX FH Key Location/Qualifiers FH FT source 1..7081 FT /organism="Guanarito virus" FT /segment="L" FT /strain="INH-95551" FT /mol_type="genomic RNA" FT /country="Venezuela" FT /db_xref="taxon:45219" FT CDS 31..6627 FT /codon_start=1 FT /product="L protein" FT /note="polymerase" FT /db_xref="GOA:Q6UY70" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR010453" FT /db_xref="InterPro:IPR014386" FT /db_xref="UniProtKB/Swiss-Prot:Q6UY70" FT /protein_id="AAP44540.2" FT /translation="MDEKVFVLKDFIRRQVPDIPELSYQKEALLSQVEVPMVLTEGFKL FT LSCLVEIESCRKNSCECNFEQKFVDTILSENGVVAPTLPKVIPDGYRFFNKTLILLETF FT VRVNPEEFEKKWKTDMAKLLSLKEDIHRTGITLVPVVDGRGNYNTDLLPDWATERFRWL FT LIDLLRESRGAPTMEIEDQEYHRLIHSLSKTSNQSLGFENIECLKRVHLNYEERLNEQL FT LKDIVGEVRESKIREELIKLKTWYREEIYRKGLGNFVQTDRKSLLQTLVLSSAHSDSLA FT PECPMCCSKILDLCYQLSMRIANQTSLENNFDEPPLPTTQIEKVYLSLLSACNKIKGKK FT VFNTRRNTLLFLDLIILNFVAHVYKTQPSEMETLKKAGLIIGEMLLLPNDRVLDILVAR FT RLLLKKVESCCNWLDRCRHLLRKEEPVLWDCVSEFTNVPDFELLLSLAEELCSEKPVMH FT YKPPSSLIGDCAHKDLMSMSDGEFESLFKCLSHISLSLVNSMKTSFSSRLLVNEKDYKR FT YYGTVRLKECYVQRFFLREGLYGLLFYQKTGEKSRCYSLYLSDKGNLVELGSFYSDPKR FT FFLPIFSEFVLLATCAEMLSWLDFDEKLVDAVTPLLKILVLSILSSPTKRSQTFLQGLR FT YFIMAYVNQAHHIQLMSKLAVECKSASDVLIQRLSVKIVDMVLSDGSDPDMHMTRKFKF FT VLNVSYLCHLITKETPDRLTDQIKCFEKFMEPKLEFGSLIVNPSLNGFLSKEQEDVMIE FT GVEKFFSKELLTVEDLKRPGVSRELLSYCVSLFNKGRLRVNGTLGTDPYRPSFTSTALD FT LSSNKSVVIPKLNEVGEIVSEYDKQKLVSTCITSMAERFKTKGRYNLDPDTIDFLIMRN FT LTNLLSARKLDSSKKEELSLLYEHLSEDVMKAFEEIKYEVEITLSKMRLSRELECGHKK FT PCTLEGVWAPFNVLKVIRSETSVHEIRDFDPDLLGEDVYEKLCVAVYDSPLRPTFFLEK FT PLDICPLELLLKNLTTKSYEDDEFFDCFKYILIQAGFDQRLGAYEHKNRSRLGLSEEAF FT RLKEDVRVSNRQSNSEAIADRLDKSFFTSAALRNLCFYSEESPTEYTCISPNVGNLKFG FT LSYKEQVGSNRELYVGDLNTKMMTRLVEDFTEAVANSMNYTCLNSEKEFERAICDMKMA FT VNNGDLCCSLDHSKWGPFMSPALFHAFFGALKFKISKTGEQVDLGPVLNVLKWHLHKAV FT EVPISVAEAYCTGMLKRRLGLMSLSCQSVCEEFFHQKLLLEEGVPSHIMSVLDMGQGIL FT HNSSDLYGLITEQFINYCLDFLFDVIPVSYTSSDDQITTFKLPTMSSSEDGLDGFDWLE FT LLCFHDFLSSKFNKFVSPKSVSGTFVAEFKSRFFVMGEETPLLTKFVSAALHNVKCKTP FT TQLAETIDTICDQCVANGVGIEIVTKISERVNRLIRYSGYPQTPFLAVEKQDVKDWTDG FT SRGYRLQRNIEHYLQGSEQLEFVRKCAKKVLLKIKKGQVFEEYLVQLIGKDGDDALKGF FT LSYAGCESDEIKDVLKYRWLNLSANGDLRLVLRTKLMSTRRVLEREQIPTLIKTLQSKL FT SKNFTKGVKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGSGGFMYIREVLNKQR FT VCPCEICAQNPGIIFCSDALTLIPEFSRSILWDYFSLVLTNACELGEWVFSSVQPPKVP FT ILLNNPNLFWAVKPRGTRLIEDQLGLGHVLQSVRRSYPKVFEEHLVPFMNDLQVSRTTD FT FTRLRYLDVCVALDMMNENLGIVSHLLKAKDNSIYIVKQSECAVAHIRQVEYVNQELGL FT SPQQICSNFKIQLVFSSMINPLVITTSVLKPFFWFNEVLNLEDESQIDVGELTDFTILI FT KKYNLNRAMMLDDLTMGYVVSTISEPTIHLVSLKRNSNSIVGEQNSEMLHGEQVEDMYS FT IVLHIQLEHKRHSTKYHLSRTVVYSYTVECETNITDIEKEPSLATVKNVVLRASGSIEG FT HQFLDGVNLVASQPIFTGKKVINLSELLADSEITETYKEGDAVGSILLNFGTFYEHIDD FT RYAYEIVGPECSDSPLVLDGGSILADGKKLSSIKVELTGDVILKALGALESEKEVQSLL FT TGLWPFIRINNLKVKMAQEDFLLMYEMHRESLLKSLEVFSEWCEFVDFSVCYSKSLRDL FT VISDSSGSLRLKGITCKPINLSNSVTEIE" FT CDS complement(6721..7008) FT /codon_start=1 FT /product="Z protein" FT /db_xref="GOA:Q6UY71" FT /db_xref="InterPro:IPR003224" FT /db_xref="UniProtKB/Swiss-Prot:Q6UY71" FT /protein_id="ABY59835.1" FT /translation="MGNSKSKSNPSSSSESQKGAPTVTEFRRTAIHSLYGRYNCKCCWF FT ADKNLIKCSDHYLCLRCLNVMLKNSDLCNICWEQLPTCITVPEEPSAPPE" XX SQ Sequence 7081 BP; 2186 A; 1206 C; 1606 G; 2083 T; 0 other; cgcacagtgg atcctaggcg aaatttgaca atggatgaaa aagtctttgt tttgaaagat 60 tttatcagaa gacaagtgcc tgacatacct gaactgtctt atcagaagga ggcattactt 120 tctcaagtcg aagtaccaat ggtcttaaca gagggcttca agctcctatc atgcctggtc 180 gagattgaat cctgcaggaa gaattcttgt gagtgcaact ttgaacagaa atttgttgat 240 acaatactct ctgaaaatgg ggtggttgca cccacactac caaaggtgat acctgacggt 300 tacaggttct tcaataagac attgatactc cttgaaacat ttgtccgtgt gaatcctgaa 360 gagtttgaaa agaagtggaa aaccgacatg gcaaaattgc ttagtttaaa agaggacatt 420 cacagaacgg gtattacact ggttcctgtg gttgacggta gaggcaacta caacacagat 480 ttgctgccag attgggcgac tgaaagattc agatggttgc ttattgatct gctgagagaa 540 tcaagaggag ctcctacaat ggagattgag gatcaggagt accataggtt gattcatagc 600 ctctctaaaa caagtaatca gagcctcggg tttgaaaata tagaatgctt aaaaagggtt 660 catctgaatt atgaggaaag actcaatgag caattgctta aagacattgt gggagaagtt 720 agggaatcca agattaggga agagttgatc aaattgaaaa cttggtacag agaagaaatc 780 tacaggaaag gccttgggaa ttttgttcag acagatagaa agtccctact acagactttg 840 gtgttgtcga gtgcccactc tgactcattg gcccctgagt gtcccatgtg ctgtagtaaa 900 atccttgact tatgttatca actctcaatg agaattgcaa accaaacatc actggagaat 960 aattttgatg aacctcctct tcccacaacc cagatagaaa aagtttatct gtcattgtta 1020 tcagcgtgca ataagataaa aggaaagaaa gtgtttaaca ccagaagaaa cacacttcta 1080 tttttggact taatcatttt gaactttgtg gcacatgttt ataagacaca accttctgaa 1140 atggaaacct tgaaaaaagc aggtctgatt atcggtgaga tgttattact tcccaacgac 1200 agggttttag atattttggt tgcaaggagg cttctattga agaaagttga gtcctgctgc 1260 aattggttgg acaggtgtag acatttgtta aggaaagaag agcctgttct atgggactgt 1320 gtgtcagagt tcacaaatgt tccagacttt gagttgttgc tatctttagc tgaggagctc 1380 tgttcagaga agcctgttat gcactacaaa cctccaagtt cattgattgg cgattgtgcc 1440 cataaggacc tgatgtcaat gtcagatgga gagtttgaga gtttatttaa atgtctgtcg 1500 catatatcac tttctctcgt aaattcaatg aagacatcat tctcttccag acttctagta 1560 aatgaaaagg attataagag atactatggc acagttagat taaaagaatg ctatgtgcag 1620 aggttctttt taagagaagg cttgtatggg cttttatttt accaaaaaac aggtgagaaa 1680 tcacgttgtt actcccttta cctttctgat aaagggaacc ttgtagaact tggatctttt 1740 tattctgatc ctaaacgatt ctttttgccc atattctctg aatttgtgct tctagctaca 1800 tgcgcagaga tgttaagctg gttagatttt gatgagaagt tggttgacgc agtaaccccc 1860 ttattgaaaa tcctggtttt aagtatattg agttcaccaa caaaaaggag tcaaacattt 1920 ctacaaggat taaggtattt catcatggcg tatgtcaatc aggcccatca tatccaattg 1980 atgagcaagt tggctgttga atgcaaatca gcctcagatg ttttaattca gaggcttagt 2040 gtaaaaattg tggatatggt gttaagtgat ggttctgatc cagacatgca tatgacgagg 2100 aagtttaagt ttgtcttaaa tgtaagttac ttatgtcatt tgatcacaaa agaaactcca 2160 gatagactca cagatcaaat taagtgtttt gagaaattca tggaaccaaa actagagttt 2220 ggtagtctca ttgttaaccc atctttaaat ggctttctgt ctaaggaaca agaagatgtc 2280 atgattgagg gtgtagagaa gttcttctca aaagagcttc ttactgtgga agatttaaag 2340 agaccagggg tttctagaga gctactgagt tattgtgtgt cactttttaa caagggaagg 2400 ctaagagtta atggtacatt gggtacagac ccctatagac ccagtttcac aagcactgca 2460 ttagacttat ctagcaacaa gagtgttgtt attccgaaat taaacgaagt gggagagatt 2520 gtgtcggaat acgacaaaca aaaattggtt tccacttgca ttacttcaat ggcagaaaga 2580 tttaagacaa agggaaggta taatctagat cccgatacaa tcgactttct gattatgagg 2640 aacttgacta atcttttgtc tgcaagaaaa cttgacagca gcaagaagga agagttgtca 2700 ttgttatatg agcacttgtc tgaagatgtc atgaaagcat ttgaagagat aaagtatgaa 2760 gttgagatca ctttaagcaa aatgaggctc tcaagggaac ttgagtgtgg ccacaaaaaa 2820 ccatgtacac tggaaggtgt gtgggcaccc ttcaatgtct tgaaagtaat taggagtgag 2880 acaagtgttc atgaaattag ggattttgat cctgacctct tgggggaaga tgtctatgaa 2940 aagttatgtg tggctgttta tgattctcca ttaagaccta ccttcttttt ggaaaagcct 3000 cttgacatct gtccattgga actcctactg aaaaacttaa caacaaaatc ttatgaagat 3060 gatgaattct ttgattgttt caagtacatc ctgattcaag caggatttga tcagaggtta 3120 ggggcttatg aacataaaaa taggtccaga ttggggctct cagaggaagc ttttaggcta 3180 aaggaggatg tgagagtgag caatagacag agtaattcag aagccatagc tgacagacta 3240 gacaagagtt tcttcaccag tgctgctcta aggaacttgt gcttttattc ggaggaatcc 3300 ccaacagagt acacatgtat tagcccaaat gtgggtaatt tgaaatttgg tttgagttac 3360 aaagagcaag ttggttcaaa tagagaactt tacgtaggtg acttaaacac aaagatgatg 3420 acaagattag ttgaagactt tactgaggca gtggctaact caatgaatta cacatgtctt 3480 aactctgaaa aagagtttga gagggcaatc tgtgatatga agatggctgt gaacaatggg 3540 gacctgtgct gttctctaga tcattcaaaa tggggccctt tcatgagtcc agctcttttt 3600 catgcattct ttggagctct taagtttaaa attagtaaga caggtgaaca agtagatctc 3660 gggccagttc taaatgtgtt aaagtggcat ttacataaag ctgtagaagt accaatcagt 3720 gttgctgagg catattgcac aggcatgttg aaaagaaggt tgggtttaat gagtttaagc 3780 tgccaatcag tgtgtgaaga gttctttcac cagaaattat tattagaaga aggagtgccc 3840 agtcatatta tgtctgtctt agacatggga cagggcatac ttcacaattc atctgatctt 3900 tatggtttga ttactgagca attcataaac tactgtttgg atttcctctt tgacgtgata 3960 ccggtgtctt acacgtctag tgatgatcag atcacaacgt tcaaattgcc aactatgtct 4020 tcaagtgaag atgggttaga cggttttgat tggttagagc ttttatgttt ccacgatttt 4080 ttgtcctcaa aattcaacaa atttgtgagc cccaagagtg tttctgggac ttttgttgct 4140 gagtttaaat caaggttctt tgtcatgggt gaggaaacac ctctgttaac caagtttgta 4200 tctgcagcat tgcataatgt caagtgtaaa actccaacac aacttgctga aactattgat 4260 acgatttgtg atcaatgtgt ggctaatggt gtcggaattg aaattgtcac aaaaatatca 4320 gaaagagtga acaggttaat taggtactct ggttaccctc aaacgccctt tcttgctgtt 4380 gaaaaacaag atgttaagga ctggactgat ggctcaagag gttacagatt acaaaggaat 4440 attgaacact acctacaagg gagtgaacaa ttggaatttg tgaggaagtg cgcaaaaaag 4500 gttttgttaa aaataaagaa agggcaagtt tttgaggaat acttagttca gctaataggg 4560 aaagatgggg atgatgcttt gaaaggcttt ttgtcttatg caggctgtga atcagatgaa 4620 attaaggatg tccttaagta ccgctggcta aatttatctg caaatggtga cttaaggctt 4680 gtgttgagga caaaacttat gtcaacaaga agggtgcttg aaagagagca aattccaact 4740 cttatcaaga cgttacagtc aaaactctca aaaaatttta caaaaggagt caagaaaatt 4800 ctggcagaat caatcaacaa gtcagcgttc caatcatctg ttgcttcagg tttcatcggt 4860 ttttgtaaga gtatgggtag caagtgtgtt agagatggca gtggaggttt catgtacatt 4920 cgtgaggttt taaataagca gagggtatgt ccctgtgaga tatgtgcaca aaaccctggg 4980 atcatttttt gttctgatgc attgacctta ataccagaat tttcgagatc aatattatgg 5040 gattattttt ctctggtgtt aacaaatgcc tgtgagttag gagaatgggt gttctcttca 5100 gtacaacctc caaaagtgcc cattctacta aataacccca atctcttttg ggctgttaaa 5160 cctagaggaa cccgtttaat tgaagatcaa ttaggattag gtcatgtatt gcaatcagta 5220 aggaggagtt accctaaagt ttttgaagag cacttagtac cgttcatgaa tgacctacag 5280 gttagtcgca ctactgattt cacaagactg aggtacttag atgtgtgtgt tgctcttgac 5340 atgatgaatg aaaatttggg aattgtgtct catctgttga aggcaaagga taattcaata 5400 tatattgtta aacaaagtga gtgtgctgtc gcacatataa gacaagttga atatgtaaat 5460 caggaattag ggttaagccc tcaacagatt tgcagtaatt ttaaaataca gttggtcttt 5520 tcatctatga ttaatccttt agttattaca acatctgtgc taaagccttt cttctggttt 5580 aatgaggttt tgaatctaga agatgaaagt cagattgatg tcggtgagct cactgacttt 5640 acaatactga taaaaaagta caacttgaat agagcaatga tgctggatga tttaacaatg 5700 ggttatgtgg tgtcaacaat tagtgagccc accatacatt tagtttcact taaaagaaac 5760 tcaaattcaa ttgtgggtga acaaaactct gaaatgcttc atggagaaca agtggaagat 5820 atgtattcca tagtgctgca catccaactt gagcacaaaa ggcattcaac aaagtaccat 5880 ttatcaagaa cagttgttta ttcttacaca gttgaatgtg agactaacat cactgacatt 5940 gagaaagaac caagcttagc aactgtaaag aatgtggtgc tgagagcatc tggatccatc 6000 gagggccatc aatttttaga tggtgttaac cttgttgctt cccagcctat attcacaggg 6060 aaaaaagtca taaacctaag tgagctgctg gctgactcag aaatcacaga aacatacaaa 6120 gagggcgatg cagtgggatc aattcttcta aactttggta cattttatga acatattgac 6180 gacagatatg cttatgaaat tgtggggcct gagtgttccg attcccctct agtgctcgat 6240 ggaggctcta tcttagctga tggcaaaaag ctttccagca taaaagtcga actcactggg 6300 gatgtcatcc taaaggcatt aggggcccta gaatcagaaa aggaagtgca aagcctgctg 6360 acagggttgt ggccattcat tagaataaac aatctaaaag tgaagatggc tcaggaggac 6420 ttccttttaa tgtatgagat gcacagggaa tcattgttaa aatctcttga ggtcttcagc 6480 gaatggtgcg agtttgtgga ctttagtgtc tgctatagca aatctttaag ggacttggtg 6540 atatcagaca gctccggcag cctgaggctc aaaggcatca cctgtaaacc catcaatctg 6600 tcaaattcag tcaccgaaat tgagtaggcc acagaggacc agcaacaccc ccgggcatcc 6660 ccggtggggg ccccactggg gcccccgggg ggtgggagtg atgatctacg ccacccgcat 6720 tcattccggt ggagcgcttg gctcctccgg aactgtgatg catgtgggca gctgctccca 6780 acaaatgttg cagagatcag agtttttcag catgacattt aaacacctca agcagaggta 6840 atgatcagag catttaatca gattcttgtc agcaaaccag caacacttgc agttgtacct 6900 cccatagaga ctgtgaatgg cagtcctcct aaattctgtg actgttggtg cccctttttg 6960 agactctgag gaactggatg ggttggattt agattttgaa ttgcccatgt ttgtaaatgg 7020 gttcaagttg tgaaaatctc aacttatagg cgtgaaagtt acgcctagga tccactgtgc 7080 g 7081 // |
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