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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY187032; SV 1; linear; genomic DNA; STD; PRO; 1770 BP.
XX
AC   AY187032;
XX
DT   04-FEB-2003 (Rel. 74, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Cellvibrio japonicus endo-b1,4-mannanase 5B (man5B) gene, complete cds.
XX
KW   .
XX
OS   Cellvibrio japonicus
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Cellvibrio.
XX
RN   [1]
RP   1-1770
RX   DOI; 10.1042/BJ20021860
RX   PUBMED; 12523937.
RA   Hogg D., Pell G., Dupree P., Goubet F., Martin-Orue S.M., Armand S.,
RA   Gilbert H.J.;
RT   "The modular architecture of Cellvibrio japonicus mannanases in glycoside
RT   hydrolase families 5 and 26 points to differences in their role in mannan
RT   degradation";
RL   Biochem. J. 371(Pt 3):1027-1043(2003).
XX
RN   [2]
RP   1-1770
RA   Hogg D., Spurway T., Armand S., Gilbert H.J.;
RT   ;
RL   Submitted (26-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Cell and Molecular Biosciences, University of Newcastle upon Tyne, Kings
RL   Road, Newcastle upon Tyne NE1 7RU, United Kingdom
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1770
FT                   /organism="Cellvibrio japonicus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:155077"
FT   CDS             85..1770
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="man5B"
FT                   /product="endo-b1,4-mannanase 5B"
FT                   /note="Man5B"
FT                   /db_xref="GOA:Q840C1"
FT                   /db_xref="HSSP:1E8R"
FT                   /db_xref="InterPro:IPR001547"
FT                   /db_xref="InterPro:IPR001919"
FT                   /db_xref="InterPro:IPR002883"
FT                   /db_xref="InterPro:IPR008965"
FT                   /db_xref="InterPro:IPR009031"
FT                   /db_xref="InterPro:IPR012291"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="InterPro:IPR018087"
FT                   /db_xref="InterPro:IPR018366"
FT                   /db_xref="UniProtKB/TrEMBL:Q840C1"
FT                   /protein_id="AAO31760.1"
FT                   /translation="MNMKKFLFNAAVAFSLIGTATAALAGFKISGTQLLDGNGNPFIMR
FT                   GVNHPHAWYTSRTQQALADIASVKANTVRVVLADGQQWTRTTATEVANIINWAKQNKLI
FT                   VVLEVHDVTGSGEQASAGTLYNATTYWLDMAATLQGQEDYVLINIANEPYGNGVPASTW
FT                   VDQHKQAIQRIRTAGLTHTLIVDAANWGQDWEEIMLNNASSVAAADTLKNTLFSVHMYQ
FT                   VYQSRSTVESYVTRFMQTHNLPLIVGEFGADHYGEFVDADSIMAVAQQYNIGYLGWSWS
FT                   GNSSNVASLDITNNWNVNSLSTWGNRLINGTNGIKATAQLASVYGSASSSSSSSSSVVS
FT                   SSSSSAVSSVVSSSSASSSSVSSVSGGQQCNWYGTRYPLCVTTSNGWGWENNQSCIARA
FT                   TCSAQPAPWGIVGDSSSSVASSSSSVVSSTSSVISSSSSSIRSSSSSSSSIASSVASSA
FT                   APAGNCQYVVTNQWGDGFTGAVRITNRGSSAINGWSVSWSYSDGSRLTNSWNANVTGTN
FT                   PYTATHLSWNGSIQPGQTVELGFQGTKSANQAASVPVVTGSVCN"
XX
SQ   Sequence 1770 BP; 415 A; 436 C; 449 G; 470 T; 0 other;
     acggagctaa acatggctaa atcctttctg gacgtttttt ccaacgatgg tgtttttacc        60
     aagcgatcta cccgaaagtt accgatgaat atgaaaaaat ttttatttaa tgctgctgtt       120
     gcgttttcct taatcgggac tgcgactgcg gcattggccg gctttaagat ttccggtacc       180
     caattgctcg atggtaatgg caatccattc attatgcgcg gtgttaatca cccgcatgcc       240
     tggtacacca gtcgtaccca gcaggcgctt gcggatatcg ccagcgtgaa agccaatacc       300
     gtgcgtgttg tgcttgcaga tggccagcaa tggacccgca ccacagctac agaagtggct       360
     aatatcatta actgggccaa acaaaataag ctaattgtgg tgttggaagt tcacgatgtc       420
     accggttccg gtgagcaggc ttctgccgga accctttata acgctactac ctattggctc       480
     gatatggcgg caacgctaca aggccaggaa gattatgtat tgatcaatat tgccaatgaa       540
     ccttatggta atggcgtgcc cgccagcacc tgggttgatc aacataagca ggcgattcaa       600
     cgtattcgca ccgcaggctt gacgcataca ctgattgtgg atgccgctaa ctgggggcag       660
     gattgggaag aaattatgct gaataacgct tccagcgttg cggcagccga tacactgaaa       720
     aataccctgt ttagtgtcca catgtatcag gtgtatcaat cccgctccac agtggaaagc       780
     tatgtgaccc gctttatgca gacccataat ctgccgttga ttgtaggtga gtttggcgct       840
     gaccattatg gtgagtttgt cgatgccgat tctattatgg cagtagccca gcaatacaac       900
     atcggatacc tcggttggtc ctggtcgggc aatagcagta atgtagcgtc tctggatatc       960
     accaataact ggaatgtgaa tagcctttca acctggggga atcgcctaat caatggtacc      1020
     aacggtatta aggctactgc acaactggcc agtgtttacg gttctgcatc cagttcatcg      1080
     tccagcagtt cctctgtggt atccagcagc tccagctcag cagtgtcgag tgttgtttca      1140
     tccagttcgg cttcatccag ctctgtatcc tctgtcagcg gtgggcagca gtgtaattgg      1200
     tatggcactc gctatccctt gtgtgtcacc actagcaatg gctggggatg ggaaaataac      1260
     caaagttgta ttgcccgtgc tacctgtagt gcacaaccgg cgccctgggg cattgtgggg      1320
     gatagctcat cgtctgttgc cagttcttcc agctcggttg tcagcagcac cagtagtgtt      1380
     atcagctcat catccagcag cattcgctcg tcgtcatctt catcgagcag tatcgcctct      1440
     tctgtagcaa gttccgctgc acctgcgggt aattgccaat atgtggtgac caaccaatgg      1500
     ggtgatggtt tcaccggtgc agtgcgtatc accaaccgtg gcagttcagc cattaatggt      1560
     tggagtgtta gctggagcta cagtgacggt tcacgcttga cgaacagttg gaatgccaat      1620
     gtcaccggca ctaatcccta taccgccact catctttcat ggaatggcag tatccagcct      1680
     ggccagacag ttgagcttgg attccaggga acaaaatccg ctaatcaggc ggcctctgtt      1740
     cctgttgtga cagggtcggt ttgcaattaa                                       1770
//
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