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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY187031; SV 1; linear; genomic DNA; STD; PRO; 1407 BP.
XX
AC   AY187031;
XX
DT   04-FEB-2003 (Rel. 74, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Cellvibrio japonicus endo-b1,4-mannanase 5A (man5A) gene, complete cds.
XX
KW   .
XX
OS   Cellvibrio japonicus
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Cellvibrio.
XX
RN   [1]
RP   1-1407
RX   DOI; 10.1042/BJ20021860
RX   PUBMED; 12523937.
RA   Hogg D., Pell G., Dupree P., Goubet F., Martin-Orue S.M., Armand S.,
RA   Gilbert H.J.;
RT   "The modular architecture of Cellvibrio japonicus mannanases in glycoside
RT   hydrolase families 5 and 26 points to differences in their role in mannan
RT   degradation";
RL   Biochem. J. 371(Pt 3):1027-1043(2003).
XX
RN   [2]
RP   1-1407
RA   Hogg D., Spurway T., Armand S., Gilbert H.J.;
RT   ;
RL   Submitted (26-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Cell and Molecular Biosciences, University of Newcastle upon Tyne, Kings
RL   Road, Newcastle upon Tyne NE1 7RU, United Kingdom
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1407
FT                   /organism="Cellvibrio japonicus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:155077"
FT   CDS             70..1362
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="man5A"
FT                   /product="endo-b1,4-mannanase 5A"
FT                   /note="Man5A"
FT                   /db_xref="GOA:Q840C2"
FT                   /db_xref="HSSP:1E8R"
FT                   /db_xref="InterPro:IPR001547"
FT                   /db_xref="InterPro:IPR002883"
FT                   /db_xref="InterPro:IPR009031"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="InterPro:IPR018087"
FT                   /db_xref="UniProtKB/TrEMBL:Q840C2"
FT                   /protein_id="AAO31759.1"
FT                   /translation="MSLFTPLSETNVRSHTNTSSVFCRRIKTLVAGLTALGLMLAAVSA
FT                   SAGFYVSGKQLREGNGNNFIMRGVNLPHAWFPDRTNQALADISATGANSVRVVLSNGRL
FT                   WSRTPESQVASIISQAKARQLITVLEVHDTTGYGEQTAATLSEAVDYWIAIRNALIGQE
FT                   DYVIINIGNEPFGNGQSASTWLNLHRDAINRLRNAGFTHTLMVDAANWGQDWENIMRNN
FT                   ASSLFNSDPRRNVIFSVHMYEVYPNDTAVNNYMSAFNSMNLPLVVGEFAANHFGSYVDA
FT                   GSIMARAQQYGFGYLGWSWSGNSSNLSALDVVTNFNAGSLTTWGNLLINNTNGIRNTSR
FT                   KATIFGGSGSSSSSAGSCGTAPNGYPYCCNASSATGNGWGWENNRSCVVATTSTSCNWY
FT                   GTSYPICVNTSSGWGWENNRSCIAASTCAAQ"
XX
SQ   Sequence 1407 BP; 325 A; 410 C; 370 G; 302 T; 0 other;
     ttcaaacggg aggtgttgtc ttttcaacgt cctccgcatc aacaacacaa taatgataaa        60
     ggtaacgcta tgtcgctctt tacccctcta tcagagacta acgtcaggtc acacaccaac       120
     acatcctctg tattttgccg ccggataaaa acactggtcg ctggccttac tgccctgggc       180
     ctgatgctgg ccgctgtatc agcatctgcc gggttttatg tgtccggcaa acagctgcgc       240
     gaaggcaatg gcaacaactt cattatgcgc ggcgttaacc tgccccacgc ctggttcccg       300
     gatcgcacca accaggccct ggcagatatc tccgcgaccg gcgccaatag tgtgcgggtg       360
     gtattaagca atggccggct ctggtcgcgc acccccgagt cacaagtggc cagcattatc       420
     agccaggcca aggcacgcca attgattacg gtattggagg tccatgacac caccggttac       480
     ggtgaacaaa ccgctgccac cctgagtgag gccgtggatt actggatcgc aatccgcaat       540
     gcgctgatcg gtcaggagga ttacgtgatc attaatattg gcaatgagcc gttcggcaac       600
     ggccagtcgg ccagcacctg gctcaacctc caccgcgatg ccatcaaccg cctgcgcaat       660
     gccggtttta cccacaccct gatggtggac gccgccaact ggggacagga ctgggaaaac       720
     atcatgcgca ataacgcctc cagcctgttc aatagcgacc cgcgccgcaa tgttattttc       780
     agtgtgcata tgtacgaggt gtaccccaac gacaccgccg tcaataatta catgtcggca       840
     tttaacagta tgaatttacc tttggtggta ggtgaatttg ccgctaacca tttcggcagc       900
     tatgtggatg ccggctccat tatggcgcgc gcgcagcaat acggttttgg ttacctcggc       960
     tggtcctggt cgggcaacag cagcaacttg tcagcactgg atgtggtcac caactttaat      1020
     gcaggcagcc ttaccacctg gggcaacctg ttgatcaata acaccaacgg tattcgcaac      1080
     acgtcgcgca aagccaccat ctttggcggc agcggtagtt cgagcagcag tgccggcagc      1140
     tgcggcacgg cgcctaacgg ttatccctac tgctgtaacg cttcctctgc aaccggcaac      1200
     ggttggggct gggagaacaa ccggagttgc gtggtggcca ccaccagtac cagctgtaat      1260
     tggtatggca ccagctatcc catctgtgtg aataccagca gcggttgggg ttgggaaaat      1320
     aaccgcagct gtattgcagc cagcacctgc gcagcgcagt aattcccatg aaaaaggccg      1380
     cgcctgtgat acaagtgcgg catccaa                                          1407
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