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EBI DbfetchID AY184489; SV 1; linear; genomic DNA; STD; PRO; 4124 BP. XX AC AY184489; XX DT 10-FEB-2003 (Rel. 74, Created) DT 03-SEP-2003 (Rel. 77, Last updated, Version 2) XX DE Tannerella forsythensis SusB (susB) gene, complete cds; and SusC (susC) DE gene, partial cds. XX KW . XX OS Tannerella forsythia OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; OC Tannerella. XX RN [1] RP 1-4124 RX DOI; 10.1034/j.1399-302X.2003.00091.x RX PUBMED; 12930523. RA Hughes C.V., Malki G., Loo C.Y., Tanner A.C., Ganeshkumar N.; RT "Cloning and expression of alpha-D-glucosidase and RT N-acetyl-beta-glucosaminidase from the periodontal pathogen, Tannerella RT forsythensis (Bacteroides forsythus)"; RL Oral Microbiol. Immunol. 18(5):309-312(2003). XX RN [2] RP 1-4124 RA Ganeshkumar N.; RT ; RL Submitted (20-NOV-2002) to the EMBL/GenBank/DDBJ databases. RL Pediatric Dentistry, Goldman School of Dental Medicine, Boston University, RL 801 Albany Street, Room 215, Boston, MA 02118, USA XX FH Key Location/Qualifiers FH FT source 1..4124 FT /organism="Tannerella forsythia" FT /strain="ATCC 43037" FT /mol_type="genomic DNA" FT /db_xref="taxon:28112" FT gene 407..2533 FT /gene="susB" FT CDS 407..2533 FT /codon_start=1 FT /transl_table=11 FT /gene="susB" FT /product="SusB" FT /note="alpha-D-glucosidase; similar to bacteroides FT thetaiotamicron alpha-D-glucosidase" FT /db_xref="InterPro:IPR019563" FT /db_xref="UniProtKB/TrEMBL:Q84FT4" FT /protein_id="AAO33827.1" FT /translation="MKSINLRKKLFFLFSFLVSAPFMMRAEELKSPDGNLLMRFEVNGE FT GTPVYELTYKRKPVIKPSRLGLEIEGFSLRKAFTLKGVETATFDETWTPVWGEVKAIRN FT HYNEMTATLHQADGDRTMVIRFRLYDDGLGFRYEFPQQKSLNYFVIKEEYSEFAMAGDH FT KAFWIPGDYDTQEYDYTESRLTEIRGLMQTAITPNTSQTPFSPTGVQTALMMKSDDGLY FT INLHEAALVDYPCMSLNLDDQTLTFQSWLTPDAQGKKGYMQTPCHTPWRTVIVSDDARR FT ILASHLTLNLNEPCKLDDVSWIRPVKYIGVWWEMISGKSTWAYTNDLPSGTLAFTDYTK FT MKPNGTHAANNEKVRRYIDFAAKHGFDQVLVEGWNIGWEDWFGNSKDYVFDFVTPYPDF FT DLKALNEYAHSKGVKLMMHHETSSSVRNYERQMEKAYKLMNDYGYNAVKSGYVGNIIPR FT GEYHYGQWMVNHYLYAVKKAAEHRIMVNAHEAVRPTGLCRTYPNLIGNEAGRGGEYESF FT GGNKVFHTNILPFTRLMGGPMDYTPGIFETRVEKVNPGNNSYVHSTLARQLALYVTMYS FT PLQMAADLPENYERFMDAFQFIKDVAIDWDDSKYLEAEPGRYITVARKAKGTNNWFVGC FT TANEDGHLSNVSLDFLDPGRKYTATIYADAPTAHYEKNPQAYTIKQMKVTNKSKLTLRA FT ASGGGYAISIMEQK" FT gene 2553..>4124 FT /gene="susC" FT CDS 2553..>4124 FT /codon_start=1 FT /transl_table=11 FT /gene="susC" FT /product="SusC" FT /note="outer membrane protein; TonB-linked outer membrane FT protein similar to bacteroides thetaiotamicron and FT Porphyromonas gingivalis receptor antigen (RagA)" FT /db_xref="GOA:Q84FT3" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q84FT3" FT /protein_id="AAO33828.1" FT /translation="MNKKERFSRKRSICLLLVALFFAAGGYAQKITVKGTVVDEMNEPV FT IGANVVEKGTINGIITDLDGHFTLSVDEKAVIVVSYIGYKPQEVNATKDPMRIILREDS FT KMLEEVVVIGYGSVKKDDATGSVTAIKPDKMNRGLTTNAQDLMAGKIAGVNVVSSGGTP FT GGGATIRIRGGSSLNANNDPLIVIDGLAMDNDGVKGLSNPLSMVNPNDIETFTVLKDAS FT ATAIYGSRASNGVIIITTKKGALEGGKSKVRITYDGNVSMSNAKDKIEVMNADEYRARI FT KQQYGESSDAYKALGNANTDWQKEIYRVAFSTDHNISMYGGLGTTPFRVSIGYTNQNGI FT LKTSNFERYTASLNLSPSFFDGMLKLNGNLKGMYAQSRFADAGAVGTATRMDPTHPVMG FT EGEIYSKYFGGYFQWTNDGKALNDPTWTVTNNSLAPANPVSLLELKNDRSKSKSLVGNL FT EVDYKFHFLPDLRIHANGGMDLSTGKQTTDVSPYSFTNNYYGSYGFEEIDKYNLSFNTY FT LQYVKSA" XX SQ Sequence 4124 BP; 1098 A; 1048 C; 1107 G; 871 T; 0 other; ttctttcaaa taccggcatg acggatatgc gttcctcgac gaaaaagtaa aagaggccaa 60 cgtagcatac gatctggaat ttttatcgtc gatgattacc gacagtcaat tacagatggt 120 ttgtatggaa cccggtcgat ggagtaatcc gcaccgtaag accgaccagt ttcaagactt 180 gattatttta caaaaaacgt aaaaacacgt ccttcggaga aagcggtcgc actgttttca 240 tcattattcc atttatattt ttttactcta taaaagtcga caaataacaa acgaacaata 300 ttttacgatt tatataagac ctgttttatt tatattcggt ttcattcgga aaatatagca 360 gctttcaggg atgtatcttt gtctccggtt ataattttta attgacatga aaagcataaa 420 tctgcgaaaa aagctgtttt ttctattctc ttttcttgtg tccgcacctt ttatgatgcg 480 tgcggaagag ttgaaatcgc cggacggaaa cctgttgatg cgtttcgagg tgaacggcga 540 aggtacccct gtttacgaat tgacgtacaa acggaagccg gtgatcaaac cgagcaggct 600 cggtctcgaa atcgaaggat tctcgttgcg taaagcgttt acgctgaaag gtgtcgaaac 660 cgcaacgttc gacgagacct ggacgcctgt ctggggcgaa gtgaaagcga tacgcaatca 720 ttataacgag atgaccgcga cgcttcatca ggccgacggc gaccgcacca tggtcatacg 780 tttccgcctt tatgacgacg gactgggctt tcggtacgaa tttccgcaac agaagagcct 840 gaactatttt gttattaagg aagaatattc ggagtttgcg atggcgggcg atcataaagc 900 cttctggatc ccgggcgatt acgatacgca ggaatacgac tacacggaat cgcgcttgac 960 ggagatacgc ggactgatgc aaacggccat cacgccgaac acgtcgcaaa cgccattttc 1020 acctacgggc gtgcagacgg cgctgatgat gaagtccgat gacgggcttt acatcaactt 1080 gcatgaggct gctcttgtcg actacccgtg catgtcgctc aatctcgacg atcaaacgtt 1140 gacgtttcag tcgtggctga cgccggatgc gcaagggaaa aaaggatata tgcaaacccc 1200 gtgtcacacg ccgtggcgta cagtgatcgt cagcgacgac gcacgccgta tcctcgcctc 1260 tcatctgacg ctgaatctga acgaaccgtg caagctcgac gatgtgtcgt ggattcgtcc 1320 ggtgaaatac atcggggtat ggtgggaaat gatttcgggg aaatccacgt gggcttatac 1380 caacgacttg ccgtcgggca ccttggcatt cacggactat acgaaaatga agcccaacgg 1440 cacgcatgcg gccaacaacg aaaaggtgcg ccgctacatc gactttgccg cgaagcacgg 1500 cttcgatcag gtactggtcg aaggctggaa catcggttgg gaggactggt tcgggaactc 1560 gaaggattac gtcttcgact tcgttacgcc ttatcccgac ttcgacctca aggcgctcaa 1620 cgaatatgcg cactcgaagg gcgtgaagct gatgatgcac cacgagacgt catcctccgt 1680 gcgaaactac gaacgccaga tggagaaggc ctataagtta atgaacgact atggctacaa 1740 cgccgtcaaa agcggttatg tgggcaatat cattccccgc ggcgaatacc attacgggca 1800 atggatggtg aaccattatt tatatgcggt caaaaaagcg gccgaacacc ggatcatggt 1860 caacgcacac gaagcggtgc gcccgacggg gctttgccgg acgtatccga acctgatcgg 1920 taacgaggcg ggccgcggcg gggaatacga atcgttcggc ggcaacaagg tctttcatac 1980 aaacattctt ccctttacgc gactgatggg cggcccgatg gactatacgc ccggcatctt 2040 tgaaacacgg gtcgagaaag tgaacccggg caacaattca tacgtacatt cgaccctcgc 2100 acggcagttg gcgctgtatg tgacgatgta cagcccgctg cagatggcgg ccgacttgcc 2160 ggagaactac gaacgcttta tggacgcgtt ccagttcatt aaagacgtgg ccatcgattg 2220 ggacgactcg aaatacttgg aagctgagcc ggggcgctac atcaccgtgg cgcgcaaggc 2280 caagggcaca aacaactggt tcgtaggctg cacggccaac gaggacggac atctgtcgaa 2340 tgtctcgctc gacttcctcg acccggggcg caagtacacg gccacgatct atgccgacgc 2400 cccgacggcg cactacgaaa agaatccgca ggcgtacacc atcaagcaga tgaaggtgac 2460 caacaagtcg aagctaacgc tccgcgcggc atcgggcgga ggatatgcca tcagtatcat 2520 ggaacagaaa taaaatctaa aacagcaagg atatgaataa aaaagaacga ttctctcgga 2580 agagaagtat ctgtctgctg ctcgtcgcat tgttttttgc ggccggcggc tatgcgcaga 2640 agataacggt caaaggtact gttgtcgatg agatgaacga accggtcatc ggtgcgaatg 2700 tagtggagaa aggcacgatt aacgggatca tcaccgatct ggacggtcat tttacactgt 2760 cggtcgatga gaaggccgtg atcgttgttt cttacatcgg ttacaaaccg caggaagtca 2820 acgctacgaa agaccctatg cggattattt tacgggaaga ttcgaagatg ctggaagaag 2880 tcgtcgtaat cgggtacggt tcggtcaaga aagacgatgc gacaggttcc gtgacagcca 2940 tcaagccgga caagatgaat cgcggactga cgacgaatgc acaagatttg atggccggga 3000 agattgccgg ggtgaatgtg gtgtcgagcg gcggtacgcc gggcggcggc gccacgatcc 3060 gcatccgcgg cggttcgtcg ctgaatgcca ataacgaccc gctgatcgtt atcgacgggc 3120 tggccatgga taacgacggt gtcaaagggc tctccaaccc gctctccatg gtgaacccga 3180 acgacatcga aacctttacg gtgctgaaag atgcttcggc tacagccatc tacggttcac 3240 gcgcctcgaa cggcgtgatc atcatcacga cgaagaaagg cgcgctcgaa ggcggcaagt 3300 cgaaagtgcg catcacctac gacggcaacg tctcgatgag taacgcaaaa gacaaaatcg 3360 aagtcatgaa cgccgacgaa taccgcgcac gcatcaagca gcaatacggc gaaagcagcg 3420 acgcatacaa ggcgctgggc aacgcgaaca ccgactggca aaaagaaatc taccgggttg 3480 ccttctcgac cgaccataac atcagcatgt acggtggtct gggtacgacg cctttccgtg 3540 tatcgatcgg ttatacgaac cagaacggta tcctcaaaac gtcgaacttc gagcggtaca 3600 cggcatcgct caacctctcg ccctcgttct tcgacgggat gttgaagctg aacggaaacc 3660 tgaaagggat gtatgcacag tcccgttttg ccgatgccgg agcggtaggc acggccaccc 3720 gcatggaccc gacccatccg gtgatgggcg aaggcgaaat ctattcgaaa tatttcggag 3780 ggtatttcca gtggacgaat gacgggaagg cgctcaacga ccccacatgg acggtgacga 3840 acaactcgct ggcgccggct aatcccgtct cgctgctcga actcaaaaac gaccgctcga 3900 aatcgaaatc actcgtcggg aatctcgagg tcgattataa gtttcacttc ctccccgatc 3960 tgcgtatcca cgccaacgga gggatggacc tctcgaccgg aaagcagacg acggatgtaa 4020 gcccctattc gttcacaaac aattactacg gcagctacgg cttcgaggaa atcgacaagt 4080 acaacctgtc gttcaatacg tatctgcaat atgtgaaatc ggcc 4124 // |
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