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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY178807; SV 1; linear; genomic DNA; STD; PLN; 1037 BP.
XX
AC   AY178807;
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DT   01-MAY-2003 (Rel. 75, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Ipomoea littoralis beta-amylase gene, partial cds.
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KW   .
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OS   Ipomoea littoralis
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea.
XX
RN   [1]
RP   1-1037
RX   DOI; 10.1016/S1055-7903(03)00249-5
RX   PUBMED; 15012943.
RA   Rajapakse S., Nilmalgoda S.D., Molnar M., Ballard R.E., Austin D.F.,
RA   Bohac J.R.;
RT   "Phylogenetic relationships of the sweetpotato in Ipomoea series Batatas
RT   (Convolvulaceae) based on nuclear beta-amylase gene sequences";
RL   Mol. Phylogenet. Evol. 30(3):623-632(2004).
XX
RN   [2]
RP   1-1037
RA   Rajapakse S.;
RT   ;
RL   Submitted (13-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Department of Biological Sciences, Clemson University, 132 Long Hall,
RL   Clemson, SC 29634, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1037
FT                   /organism="Ipomoea littoralis"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:223563"
FT   mRNA            join(<1..174,798..>1037)
FT                   /product="beta-amylase"
FT   CDS             join(<1..174,798..>1037)
FT                   /codon_start=1
FT                   /product="beta-amylase"
FT                   /db_xref="GOA:Q84LT4"
FT                   /db_xref="HSSP:1FA2"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q84LT4"
FT                   /protein_id="AAO59442.1"
FT                   /translation="HAAELTAGFYNVPKRDGYRPIARMLARHHATLNFTCLEMRDSEQP
FT                   AEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKL
FT                   KMSGLTYLRLSDDLLQTDNFQLFKKFVKKMHADL"
XX
SQ   Sequence 1037 BP; 321 A; 222 C; 234 G; 260 T; 0 other;
     catgcggcgg agctcaccgc cggattctac aatgttccga aaagagacgg ttatcggcct        60
     attgccagga tgctggcaag gcaccatgcc actctcaact tcacttgcct tgagatgaga       120
     gactccgaac agcctgccga ggccaagagt gctcctcaag aactcgttca acaggtacca       180
     taaccaaaat tctgcaatat caaaatgaat aaataaaaga ggcctcgagc tagcatagtg       240
     gttgatcacc ttacctcaag tcataactaa aatcggaggt gggtttgatt gtgttggcct       300
     aatttgagca ctagtgatgt agtaaataca tcgaaatata caaatatgtc taagtattgt       360
     ctagggttcg gtatgcaagc tcgagtaaat gtgatagcgg gcttgggagc cttatataga       420
     ggttggaggg gacactacaa aaaaaaaaaa aaaaaaaaaa aaaaagtagt ctgtctgcca       480
     ctttctttca tagcaggatt gtggttcccg gcacatgttg agcttgtcct ttagcataaa       540
     aggatgtccg atcaaaataa cccgtctgga cattaaggtc caacgtgcat agaagttgga       600
     gggacacatg tagggcttgt cttttagcat acaaggatgt ctgatcgaaa taacctgacg       660
     ttccaactca agctcagggt aaattatgcc tccactaaga ctcaaaccca cgaattctca       720
     tatggaaacc cactagctat ttaccaactt ggttacttcg gacatgttaa ttaaagttga       780
     gttgaatgat tgtgcaggta ttgagcagcg gatggaaaga gtatattgat gtggcaggtg       840
     agaatgcact gccaagatat gatgccacgg catacaatca aatgcttctg aacgtcaggc       900
     caaacggcgt caaccttaac ggccctccca agctcaagat gtctggcttg acatatctcc       960
     gtttgtctga cgatctctta cagacagaca acttccaact cttcaagaaa ttcgtcaaga      1020
     agatgcacgc tgatctg                                                     1037
//
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