 |
|
EBI DbfetchID AY142556; SV 1; linear; mRNA; STD; PLN; 1567 BP. XX AC AY142556; XX DT 24-SEP-2002 (Rel. 73, Created) DT 24-SEP-2002 (Rel. 73, Last updated, Version 1) XX DE Arabidopsis thaliana unknown protein (At5g16890) mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1567 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., RA Lee J.M., Quach H.L., Tang C., Toriumi M., Wallender E.K., Wong C., RA Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., RA Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., RA Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., RA Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Open Reading Frame (ORF) Clones"; RL Unpublished. XX RN [2] RP 1-1567 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., RA Lee J.M., Quach H.L., Tang C.C., Toriumi M., Wallender E.K., Wong C., RA Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., RA Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., RA Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., RA Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (16-AUG-2002) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC The RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai, J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members constructed and CC sequenced the pUNI (ORF) clones using the RAFL cDNAs: Yamada,K., CC Chan,M.M., Chang,C.H., Dale,J.M., Deng,J.M., Hsuan,V.W., Lee,J.M., CC Quach,H.L., Tang,C.C., Toriumi,M., Wallender,E.K., Wong,C., CC Wu,H.C., Yu,G., Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., CC Nguyen,M., Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., CC Davis,R.W., Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki, M. (RIKEN GSC) contributed equally CC to this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP CC /PGEC) contributed equally to this work as PIs. CC Annotation is based on the January 2002 version of the Arabidopsis CC genome submitted to GenBank. XX FH Key Location/Qualifiers FH FT source 1..1567 FT /organism="Arabidopsis thaliana" FT /chromosome="5" FT /mol_type="mRNA" FT /clone="U11182" FT /note="This clone is in pUNI 51. ecotype: Columbia" FT /db_xref="taxon:3702" FT CDS 1..1536 FT /codon_start=1 FT /gene="At5g16890" FT /product="unknown protein" FT /db_xref="GOA:Q9LFL2" FT /db_xref="InterPro:IPR004263" FT /db_xref="UniProtKB/TrEMBL:Q9LFL2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAN13125.1" FT /translation="MSGKQQNHRSTSSRPRSKTLILIGSLFTVSLLVILYTSSSSSRAS FT ISNPNPSDRPETSFVTSLEHFLIYKAPKLSLPVRDDTVRGESDDDVRKLDEMVFERENR FT WLNEDPGYPVEFPIKVYVYEMPKKFTFDLLWLFHNTYKETSNATSNGSPVHRLIEQHSI FT DYWLWADLISPESERRLKSVVRVQKQQDADFFYVPFFTTISFFLLEKQQCKALYREALK FT WVTDQPAWKRSEGRDHIFPIHHPWSFKSVRKFVKNAIWLLPDMDSTGNWYKPGQVSLEK FT DLILPYVPNVDICDTKCLSESAPMRTTLLFFRGRLKRNAGGKIRAKLGAELSGIKDIII FT SEGTAGEGGKLAAQRGMRRSLFCLCPAGDTPSSARLFDAIVSGCIPVIVSDELEFPFEG FT ILDYKKVAVLVSSSDAIQPGWLVNHLRSLTPFQVKGLQNNLAQYSRHFLYSSPAQPLGP FT EDLTWRMIAGKLVNIKLHTRRSQRVVKGSRSICRCDCWRSNSTASNSLSSLLS" FT 3'UTR 1537..1567 FT /gene="At5g16890" XX SQ Sequence 1567 BP; 398 A; 353 C; 362 G; 454 T; 0 other; atgtctggaa aacagcaaaa tcatcgttct acttcctcca gacccagatc caaaacccta 60 atcctcatcg gctctctctt caccgtctct ctactcgtca tcctctacac ctcttcttcc 120 tcctcccgag cctccatctc caatcccaac ccgtcggacc gaccagagac gtccttcgtt 180 acctcgcttg agcatttctt aatatataaa gctccgaagc tctcgttacc ggttagagac 240 gacacggtgc gtggcgagag tgatgatgat gtgaggaagc tcgatgagat ggtgttcgag 300 agagagaatc gttggttgaa cgaagatccg ggatatcctg ttgaatttcc gattaaggtt 360 tacgtgtatg agatgccgaa gaagtttact ttcgatcttc tctggttatt tcacaatact 420 tacaaagaga cttcgaatgc tacctctaat ggtagccctg tgcatcgtct aatcgaacag 480 cattctattg actattggct ttgggctgat ctgatatctc ctgaatctga aaggcgtttg 540 aaaagtgtcg tgagagttca gaagcagcag gacgccgact ttttctatgt tccgtttttc 600 actacaatca gctttttctt gttggagaag cagcaatgca aagcactcta tagggaagct 660 ttgaagtggg tcactgatca gcctgcttgg aagaggtccg agggaaggga tcacatattt 720 cctattcatc atccttggtc cttcaagtct gtccgcaaat ttgtgaaaaa cgcaatctgg 780 cttttaccag atatggactc cactggcaat tggtataagc ctgggcaagt ttcattggag 840 aaagacctaa ttcttcctta tgttcccaat gttgatatct gtgataccaa atgcttgtca 900 gaaagtgcac caatgagaac cacattactt tttttccgag ggcggcttaa gcgaaatgca 960 gggggtaaaa tacgtgccaa acttggtgca gaattaagtg gtatcaagga tataataatt 1020 tctgagggga ctgccggaga gggaggaaaa ttggcagcgc aacgtggcat gcgtagatct 1080 ttattctgtt tgtgtcctgc tggtgacaca ccatcttcag cgaggttgtt tgatgccatt 1140 gtcagtggct gtatacctgt tatagtcagt gacgagttgg aatttccttt tgaaggaata 1200 cttgattaca agaaggttgc tgtgcttgtt tcttccagtg atgcaataca gccagggtgg 1260 cttgtaaacc atctgagaag tcttacgccc ttccaagtca aggggttgca gaataatctt 1320 gctcaatact ctcgccattt cctatattcg agccctgctc agccattagg tccagaggac 1380 ttgacatgga gaatgatagc cggaaagctg gtgaatatca agcttcacac gaggaggtca 1440 cagcgggtcg tgaaaggatc taggagtatt tgcagatgcg attgctggag atccaactct 1500 acagcctcca attctttgag ttctctcttg tcttaagacc gatcactctg acttcacatt 1560 ccagtct 1567 // |
|