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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY140061; SV 1; linear; mRNA; STD; PLN; 2051 BP.
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AC   AY140061;
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DT   04-SEP-2002 (Rel. 73, Created)
DT   04-SEP-2002 (Rel. 73, Last updated, Version 1)
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DE   Arabidopsis thaliana Ser/Thr protein kinase, putative (At1g16900) mRNA,
DE   complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-2051
RA   Tripp M., Southwick A., Karlin-Neumann G., Nguyen M., Miranda M.,
RA   Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R.,
RA   Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J.,
RA   Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M.,
RA   Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (12-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
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CC   e-mail for correspondence: arab@sequence.stanford.edu
CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
CC   Hayashizaki,Y. and Sh inozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Tripp,M.,
CC   Southwick,A., Nguyen,M., Palm,C.J., Jones,T., Wu,T., Chen,H.,
CC   Cheuk,R., Chan,M.M., Chang,C.H., Dale,J.M., Deng,J.M., Hsuan,V.W.,
CC   Lee,J.M., Kim,C.J., Quach,H.L., Shinn,P., Tang,C.C., Toroumi,M.,
CC   Wallender,E.K., Wong,C., Wu,H.C., Yamada,K., Yu,G., Yuan,S.,
CC   Ecker,J., Theologis,A. and Davis,R.W.
CC   Tripp,M. (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed equally
CC   to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford) contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2051
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL09-30-N05 (R24181)"
FT                   /note="This clone is in pBluescript ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             131..1843
FT                   /codon_start=1
FT                   /gene="At1g16900"
FT                   /product="Ser/Thr protein kinase, putative"
FT                   /db_xref="GOA:Q9FZ49"
FT                   /db_xref="InterPro:IPR005599"
FT                   /db_xref="UniProtKB/TrEMBL:Q9FZ49"
FT                   /protein_id="AAM98202.1"
FT                   /translation="MDLTTTRQRRPLISDSSSSSSTKSYSKTDKPGRSNGGDAEDGGLR
FT                   WFLPFIALCYLRYMSATSNIIHDCDEVFNYWEPLHYILYKSGFQTWEYSSNFALRSYLY
FT                   ILFHELAGRPASWWFGDDKVRVFYAVRLFLGLVSAVSDTVLVVALSRKYGKRIATYAVA
FT                   MLCLTSGCFFASTSFLPSSFSMYAISLSSGLLLFEKYAMAVAVSVVGVILGWPFSILAF
FT                   LPVVIYSLVKRFKQAFIAGAVTTIFLLGVSLLVDYYYYKRWTSSVLNLLIYNVLGGGES
FT                   HLYGTEGALFYIRNGFNNFNFCFILAMLFVAIYPVIRRKYDRALLVVISPMYIWLAFMS
FT                   LQPHKEERFLYPIYPLICVSASAVIENIPELFREKYSSRESLLVTITKYMRPVILGCIL
FT                   CASHSRTFALINGYSAPLEVYKLLEHHDDAGPGSVLCVGSEWHRYPSSFFVPHYISEVR
FT                   WIDDGFRGLLPFPFNNTLGGTSASPPYFNNKNQASEEQYLKNIETCTFLIELQLSRPYQ
FT                   YRGSDLSTWEAIAVLPYLDRELSPAKYRSFFIPHMWQEKNVFGKYVALRRVPK"
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SQ   Sequence 2051 BP; 500 A; 430 C; 444 G; 677 T; 0 other;
     tggagatact tttcacaaat ctttttcttc attgcttcgt cgagaagaga atgaacaatg        60
     aagtgaacta ataaaacttc catttgcaat ttcacgacct ccattttcgt gctgagattc       120
     tctaagctcg atggatctaa cgacgacgcg tcagaggcgt ccacttatat ctgactcttc       180
     ttcttcgtct tctacgaaat cttactcgaa gaccgataaa cctggccgat ctaatggcgg       240
     tgatgcggag gatggtggtc tccgatggtt cttgccgttt atagcgcttt gttatcttcg       300
     ttacatgagc gcgacttcta atatcattca tgactgcgat gaagtgttca attactggga       360
     gcctcttcat tatattctct acaagtccgg atttcagacc tgggaataca gttccaactt       420
     tgctcttcgg tcgtacttat acattctatt ccatgaattg gctggacggc ctgcttcttg       480
     gtggtttggt gatgacaagg ttagagtttt ctatgcagtg agactctttc tcggactggt       540
     ttctgcagtt tcagatactg tcctggttgt tgcgctctcc agaaagtatg ggaaacgtat       600
     cgctacctat gcagttgcga tgctctgctt aaccagtggc tgcttctttg ctagtaccag       660
     tttcctcccc agttcatttt ctatgtacgc cataagcctc tcatctggtt tattactttt       720
     cgagaagtat gccatggctg ttgcagtttc ggttgtcggg gtgattcttg gctggccatt       780
     ttctatcttg gcctttttac ctgtcgttat ttactctctg gttaagagat tcaagcaagc       840
     atttatcgct ggtgcagtca ccactatatt tctccttgga gtctcactac ttgtggatta       900
     ctattattac aagagatgga catcatcagt tttgaatctc ttgatataca atgtgttagg       960
     gggtggagag agccatctct atgggactga aggagcgtta ttttatataa gaaatggatt      1020
     taacaacttc aacttctgtt tcattttggc aatgttgttt gtcgcaatat atcctgttat      1080
     cagaaggaag tatgaccgtg ccctgctggt tgtgatttcc ccgatgtata tttggctggc      1140
     gttcatgtca cttcagcccc acaaagaaga aaggttcctt tatcctatat accctcttat      1200
     ttgtgtctct gcttctgctg ttattgagaa catccctgag ctgttccggg aaaagtatag      1260
     ctcacgtgaa agtcttctgg tgacaataac caaatacatg cgacctgtga ttcttggttg      1320
     tatcttatgt gcttcacatt ctcgcacatt tgctcttatt aatggctatt ccgctccctt      1380
     ggaggtctac aaactactgg agcatcatga tgatgcagga ccaggttctg ttctatgtgt      1440
     gggaagtgaa tggcatcgat acccatcatc gttttttgtg ccccactaca ttagcgaagt      1500
     acggtggatc gatgatggat tccgcggtct tcttccattc ccatttaaca atacacttgg      1560
     aggcacttca gcatcacctc catacttcaa caacaagaac caagcatccg aagaacaata      1620
     tttaaagaac atcgaaactt gtacattcct cattgagttg cagcttagca gaccgtatca      1680
     gtatcgaggc agcgacttat ctacatggga ggctattgcg gtgttgcctt atttggacag      1740
     agagctgtcg ccagctaagt atagatcgtt cttcatcccg cacatgtggc aggagaaaaa      1800
     tgtgtttggc aaatacgtag cactgagaag agtcccaaaa tgatcacaaa tcgttaaaac      1860
     tccttagact tgtagcttta actcagttca ttgggtagtt ttgggagaat gtaataacta      1920
     ataactgatt agtatcggct ttaagttcag gtacgttcac ggttcgtagt tgtgttgttg      1980
     tgaaagagac tagttttaac tttgtaagaa atctccaaat ggtcagaaga acgtggaaga      2040
     ttatgtttat g                                                           2051
//
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