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EBI DbfetchID AY134668; SV 2; linear; genomic DNA; STD; PRO; 3930 BP. XX AC AY134668; XX DT 10-SEP-2002 (Rel. 73, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Rickettsia rickettsii protein export membrane protein (secF), NADH DE dehydrogenase I chain F (nuoF), and signal peptidase I (lepB) genes, DE complete cds. XX KW . XX OS Rickettsia rickettsii OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. XX RN [1] RP 1-3930 RX DOI; 10.1128/JB.185.15.4578-4584.2003 RX PUBMED; 12867468. RA Rahman M.S., Simser J.A., Macaluso K.R., Azad A.F.; RT "Molecular and functional analysis of the lepB gene, encoding a type I RT signal peptidase from Rickettsia rickettsii and Rickettsia typhi"; RL J. Bacteriol. 185(15):4578-4584(2003). XX RN [2] RP 1-3930 RA Rahman M.S., Simser J.A., Azad A.F.; RT ; RL Submitted (22-JUL-2002) to the EMBL/GenBank/DDBJ databases. RL Microbiology and Immunology, University of Maryland School of Medicine, 655 RL West Baltimore Street, Baltimore, MD 21201, USA XX RN [3] RC Sequence update by submitter RP 1-3930 RA Rahman M.S., Simser J.A., Azad A.F.; RT ; RL Submitted (20-DEC-2002) to the EMBL/GenBank/DDBJ databases. RL Microbiology and Immunology, University of Maryland School of Medicine, 655 RL West Baltimore Street, Baltimore, MD 21201, USA XX DR GOA; A8GQT8. DR InterPro; IPR011907; RNase_III_bac. DR UniProtKB/Swiss-Prot; A8GQT8; RNC_RICRS. XX CC On Dec 20, 2002 this sequence version replaced gi:22758828. XX FH Key Location/Qualifiers FH FT source 1..3930 FT /organism="Rickettsia rickettsii" FT /strain="Sheila Smith" FT /mol_type="genomic DNA" FT /db_xref="taxon:783" FT gene 290..1216 FT /gene="secF" FT CDS 290..1216 FT /codon_start=1 FT /transl_table=11 FT /gene="secF" FT /product="protein export membrane protein" FT /db_xref="GOA:A8GQT5" FT /db_xref="InterPro:IPR000731" FT /db_xref="UniProtKB/Swiss-Prot:A8GQT5" FT /protein_id="AAO00969.1" FT /translation="MQIYPLRLLPNKIDFDFMNFKKVSYTFSIILSLISFIWIGIYKFN FT FGIDFAGGIVIEVRLDQAPDLPKMRGVLGKLGIGEVVLQNFGSERDLSIRFGSNSEENL FT MKNIELIKGSLQSNFPYKFEYRKVDFVGPQVGRQLIEAGAMAMLFSFLAIMVYIWVRFE FT WYFGFGILIALVHDVILALGFMSMTKLDFNLSTIAAVLTIIGYSVNDSVVIYDRIRENL FT RKYHKKNITEIINLSINETLSRTILTVITTLLANLALILFGGEAIRSFSILVFFGIIVG FT TYSSIFISAPILTMFVNRKFNKKVIER" FT gene 1381..2646 FT /gene="nuoF" FT CDS 1381..2646 FT /codon_start=1 FT /transl_table=11 FT /gene="nuoF" FT /product="NADH dehydrogenase I chain F" FT /db_xref="GOA:A8GQT6" FT /db_xref="InterPro:IPR019554" FT /db_xref="UniProtKB/Swiss-Prot:A8GQT6" FT /protein_id="AAO00970.1" FT /translation="MLKEEDKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVE FT EVKKSGLRGRGGAGFSTGMKWSFMPKNLEKSCYLVVNADESEPGTCKDRDILRFEPHKL FT IEGCLLASFAIGANNCYIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYL FT HRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILR FT RGASWFAGIGKPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLK FT AIIPGGSSVPLLPKSLCEVDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYM FT HESCGQCTPCREGTGWMWRVMMRLVKGNVTKSEIDELLNVTKAIEGHTICALGDAAAWP FT IQGLIRHFRSEIEARIKSYSVV" FT gene 2830..3630 FT /gene="lepB" FT CDS 2830..3630 FT /codon_start=1 FT /transl_table=11 FT /gene="lepB" FT /product="signal peptidase I" FT /db_xref="GOA:A8GQT7" FT /db_xref="InterPro:IPR011056" FT /db_xref="UniProtKB/Swiss-Prot:A8GQT7" FT /protein_id="AAN04256.1" FT /translation="MQTDNTKSNTNKTAKQEWGSFAFVICIALLIRILIMEPFTVPTGS FT MKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRIFAREPDRGDIVVFRPPNDMSV FT RYIKRLIGLPGDKIQLIDDVIYINDKKIERTEVGTYISEEGIKYLKFKETLPNGRTYFS FT YKLAPIYGVIYNDRYGNTDVFYVPEGKYFFLGDNRDQSNDSRVNLGFVPFENFIAKAQF FT IWFSTKITWWDNDIGVINLVLKLKPWVESVRLNRIFRNLYNTDA" XX SQ Sequence 3930 BP; 1221 A; 553 C; 831 G; 1325 T; 0 other; tataaagctc aagcatagcg tcctgctcgg caagtttatc tttatccaat ttctttagtt 60 tcaatataga tttcatagct ttaacatcaa atccatgtga agaagcatct tggaagatat 120 cttttacttc ttgagataaa tcagcttttt cttgttctaa tctttctatt ttgcttatat 180 attgctctaa ttgttctttt attactactt ctgacataaa aaatcattta acctttttga 240 atttactata taatacaaat ataatcctta ttcaacaaaa tatataataa tgcaaattta 300 tcctttaaga cttttaccta ataaaatcga ttttgatttt atgaatttta aaaaagttag 360 ttacactttt tcaattattt tatcactcat tagctttatt tggatcggta tatataaatt 420 taatttcggt attgattttg ccggcggtat agttattgaa gtaaggcttg atcaagctcc 480 tgatttgcca aaaatgcgtg gggttctagg caagcttgga ataggtgagg tggtcttaca 540 gaatttcggt agtgagcgtg atttatcgat tagattcggt agtaatagtg aagaaaatct 600 catgaaaaat attgagttaa ttaaaggatc tttgcaaagt aattttccgt ataagtttga 660 atatcgtaag gtagattttg tcggtccgca agtcggtagg cagctaatag aagcgggggc 720 tatggcgatg ttattctctt tcttagcgat tatggtttat atttgggtgc gttttgagtg 780 gtattttggt tttggtatac tgatcgcctt agtgcatgac gtaatactcg ctcttgggtt 840 tatgagtatg acaaagcttg attttaactt aagtactatt gctgcagtgt taactattat 900 aggttattcc gttaatgatt cggtagtaat atatgatagg attagagaaa atttacgtaa 960 atatcataaa aaaaatatca cggaaattat aaatttaagt attaatgaga ctttatcaag 1020 aactatttta actgtcatta ccacgctact tgccaattta gcccttattc tttttggcgg 1080 tgaggcaatc cgtagtttta gcatacttgt attttttggg ataatagtcg gtacttattc 1140 ctcaattttt atctctgctc cgatacttac aatgtttgtt aataggaagt ttaataaaaa 1200 agtaatagaa aggtaaagaa tcgtcattgc gagcaggcat tgttgcttgg gccggcttta 1260 ttgtcattgc gagtggccgt agcctgcatg acaatctcag gattttggca cgagattgct 1320 tagtcaaaat tttcaatttt tcctcgcaat gacgttttta agccataacg agaatagttt 1380 atgctaaaag aagaagacaa aatttttact aacctgcatg ggcagcaaag ccatgatttg 1440 aaatctagca agaagcgagg cgattgggag aatactaaag ctttgcttga taaaggtaga 1500 gatttcatcg ttgaagaggt taagaaatca gggcttagag ggcgaggagg tgccggattt 1560 tctaccggta tgaaatggtc atttatgcct aaaaatttag agaagtcttg ctatttagta 1620 gtaaatgccg acgagtctga gcctggcact tgtaaggatc gtgatatctt aaggtttgag 1680 ccgcacaaat taatagaagg ttgcttgctt gcaagctttg ctataggagc gaataattgt 1740 tatatctata ttagaggtga gttttataat gaagcctcta atattcagcg tgccttagat 1800 gaagcctata aagaagggtt aataggaaag aattcttgcg gttcgggctt tgattgtaat 1860 atttatttac atcgtggggc gggtgcttat atttgtggcg aagaaacggc attgcttgaa 1920 agcttagagg gcaaaaaagg tatgcctcgt ttaaagccgc cttttcctgc cggctttggg 1980 ttatatggct gtccgactac tataaataat gttgagtcta tcgcagtagt gccaaccatt 2040 ttaagacgag gagctagctg gtttgctggt ataggtaaac ctaacaatac gggaactaag 2100 attttctgca tatcagggca tgttaacaag ccttgtaatg ttgaggaagc aatgggcatt 2160 tcgttaaaag aattgattga gaaatatgcg ggtggtgttc gtggtggatg ggataatctt 2220 aaagccataa tcccgggcgg ttcttctgtg cctttactgc ctaagtcatt atgtgaagta 2280 gatatggatt ttgatagttt aagaacagca ggttctggac ttggtacagg cggtattata 2340 gttatggatc aatctaccga tattatttat gcaatagcaa ggcttagtaa attttacatg 2400 catgaatctt gcgggcaatg tactccttgc cgtgagggta cgggctggat gtggcgagtt 2460 atgatgcggc tagttaaagg taatgtcaca aaatctgaga tagacgaact ccttaacgtt 2520 acgaaagcaa tagaggggca tactatctgt gctttaggtg atgcggcagc ttggccgatt 2580 caagggctga tacgccattt tagaagcgag attgaggcaa ggataaagag ttatagtgtg 2640 gtttgacttt ttatcgtcat tgcgaggaga tattgcctgc gtggatacta agccgtcatt 2700 gcgagcggct gaaaggagaa aggaacgtgg taatctcatg aaataataac aaactcctga 2760 gattgcttcg tcaattactt tgtaatttcc ttgcaatgac gattccaatt tataaataat 2820 taagagatta tgcaaacaga taatacaaaa tcaaacacta ataaaacagc taagcaagag 2880 tgggggtctt ttgcttttgt aatatgtatc gctttactta ttagaatact tattatggag 2940 ccgtttaccg ttccaaccgg gtctatgaaa gcaaccatac ttgagaatga ctatatattt 3000 tctacgaaat atagttatgg ttatagtaat tattctttat ctttttttga ttttattcct 3060 ctttttaaag ggcgaatatt tgctcgtgaa ccggatcgtg gcgatattgt agtttttcgt 3120 ccgcctaacg atatgagtgt tagatatata aagcgtttaa tagggctacc cggcgataaa 3180 attcaattga ttgatgatgt aatatatatt aacgacaaaa aaatagaacg cacggaagtt 3240 ggaacttata taagcgaaga gggaataaaa tatttaaagt ttaaagaaac actgccaaac 3300 ggtagaacat atttttctta taagcttgct cctatttatg gcgttatata taatgataga 3360 tacggtaata cggatgtttt ttatgtacct gaagggaaat atttcttttt aggggataat 3420 agagatcagt caaatgatag tagagtaaat cttggatttg taccgtttga aaattttatt 3480 gctaaagcac aatttatttg gttctcaaca aaaataactt ggtgggataa tgatatagga 3540 gttattaatc tagtactaaa gttaaagcca tgggttgaat ctgtgaggtt aaatcgaatt 3600 ttcagaaatc tttataacac ggatgcgtaa tggaatcatt tgagaagtta gaaaagctac 3660 ttagctatag tttcaaaaat aaagagcttt taatagaggc gttaagtcac ccgtctttaa 3720 ggcaacatca cgagtacaag gatgataaag attatgaacg attagaattt ctaggtgatg 3780 ccgtattaaa tttagtaatc acagaaattt tatttagaaa ttttgcaaat tataatgagg 3840 ggaatttagc taaaattaga tcctatttgg tttgcaaaga aacaatatgc atggttggag 3900 ctaaacttac tttaaaaaat tatataatta 3930 // |
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