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EBI DbfetchID AY133816; SV 1; linear; mRNA; STD; PLN; 1354 BP. XX AC AY133816; XX DT 12-AUG-2002 (Rel. 72, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 3) XX DE Arabidopsis thaliana clone U19220 unknown protein (At3g48820) mRNA, DE complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1354 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., RA Lee J.M., Quach H.L., Tang C., Toriumi M., Wallender E.K., Wong C., RA Wu H.C., Yu G., Yuan S., Bowser L., Carninci P., Chen H., Cheuk R., RA Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., RA Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., RA Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Open Reading Frame (ORF) Clones"; RL Unpublished. XX RN [2] RP 1-1354 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., RA Lee J.M., Quach H.L., Tang C.C., Toriumi M., Wallender E.K., Wong C., RA Wu H.C., Yu G., Yuan S., Bowser L., Carninci P., Chen H., Cheuk R., RA Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., RA Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., RA Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (17-JUL-2002) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC The RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai, J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members constructed and CC sequenced the pUNI (ORF) clones using the RAFL cDNAs: Yamada,K., CC Chan,M.M., Chang,C.H., Dale,J.M., Deng,J.M., Hsuan,V.W., Lee,J.M., CC Quach,H.L., Tang,C.C., Toriumi,M., Wallender,E.K., Wong,C., CC Wu,H.C., Yu,G., Yuan,S., Bowser,L., Chen,H., Cheuk,R., Jones,T., CC Karlin-Neumann,G., Kim,C., Lam,B., Lin,J., Miranda,M., Nguyen,M., CC Palm,C.J., Shinn,P., Southwick,A., Davis,R.W., Ecker,J.R. and CC Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki, M. (RIKEN GSC) contributed equally CC to this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP CC /PGEC) contributed equally to this work as PIs. CC Annotation is based on the January 2002 version of the Arabidopsis CC genome submitted to GenBank. XX FH Key Location/Qualifiers FH FT source 1..1354 FT /organism="Arabidopsis thaliana" FT /chromosome="3" FT /mol_type="mRNA" FT /clone="U19220" FT /note="This clone is in pUNI 51. ecotype: Columbia" FT /db_xref="taxon:3702" FT CDS 1..1323 FT /codon_start=1 FT /gene="At3g48820" FT /product="unknown protein" FT /db_xref="GOA:Q8RY00" FT /db_xref="InterPro:IPR001675" FT /db_xref="UniProtKB/TrEMBL:Q8RY00" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAM91750.1" FT /translation="MKLLHLIFLLALTTGISAVLIYIIGVSNLYESNRFTNEDLEALQS FT LQNGFQKCVSANGLGLQAAMGRDYCKVSINFPKDTVPKWKDPKSGELEGLSYEFDLCEA FT VATWEQVRNSSTILTKEYIDALPNGWEDYAWRRINKGIQLNRCQNKSLCIEKLSLVLPE FT TPPYFPRQFGRCAVIGNSGDLLKTKFGKEIDTYDTVLRENGAPIQNYKEYVGEKSTFRL FT LNRGSAKALDKVVELDEKKQEVLLVKTTIHDIMNKMIREVPIKNPVYLMLGASFGSAAK FT GTGLKALEFALSTCDSVDMYGFTVDPGYKEWTRYFSESRQGHTPLHGRAYYQMMECLGL FT IKIHSPMRADPNRVVKWVPSRSTIRSARIAAEKLLRRVGAGSADPLASCSIVKKRNKNK FT RPMVSHLRKPVSDHQKFVRSTSMYPVEHSPGHGQLCITPAD" FT misc_difference 786 FT /gene="At3g48820" FT /replace="c" FT /note="compared to genomic sequence" FT 3'UTR 1324..1354 FT /gene="At3g48820" XX SQ Sequence 1354 BP; 424 A; 264 C; 308 G; 358 T; 0 other; atgaagctct tgcatctgat attcttatta gctttgacta ctggaatctc tgctgttcta 60 atctacatta tcggcgtctc taatctctac gagtctaatc gttttaccaa tgaagattta 120 gaggcgttgc agtctttgca gaacggattc cagaagtgcg taagtgcaaa tggtttggga 180 ctacaagctg ctatgggtag agattattgc aaagtttcta taaacttccc taaggatact 240 gtccccaaat ggaaagatcc caagtctgga gagcttgaag gattgtcata tgagtttgac 300 ctgtgtgaag cagtagctac atgggaacaa gtcaggaata gctctacaat actcaccaag 360 gaatacattg atgccttacc aaatggatgg gaggattatg catggcgcag aatcaataaa 420 ggaattcaac ttaatcgttg ccagaataaa tctttatgca ttgagaagct ttcattggtg 480 cttcctgaaa caccaccata tttcccccgg cagtttgggc gatgtgctgt tattggtaac 540 tctggtgatc tcttaaaaac aaagttcgga aaggagatag atacttatga tacggttcta 600 agagaaaatg gtgctcctat tcagaactac aaggaatatg tgggagagaa aagtacattc 660 cgtcttctta atagagggtc agcaaaagcc cttgacaaag tcgtggagtt ggatgaaaaa 720 aagcaagagg tcctgctcgt caaaacaaca atacatgata ttatgaacaa gatgattcgg 780 gaagttccaa taaaaaatcc tgtgtactta atgctcggtg cttcatttgg ctcagcagcc 840 aaaggaactg ggctcaaggc tcttgagttt gctctctcga cgtgtgattc agtggatatg 900 tatggattca cagtggatcc aggctataaa gagtggacaa gatatttttc agaatcccga 960 caaggacata ctcctttgca tggaagagct tactaccaga tgatggaatg cttgggtctc 1020 attaaaatac actctcccat gagagctgat ccaaaccgtg tcgtgaaatg ggtgccaagc 1080 cgcagtacaa ttagatctgc aagaattgca gcagaaaagc tcttaaggag agttggagca 1140 ggatctgcag atccattagc ttcatgctcc atagtaaaga agagaaacaa aaacaagcgt 1200 ccaatggtct cacacctcag aaaacctgtg agcgaccatc aaaaatttgt gagaagcacg 1260 agcatgtacc cagtggagca cagtccagga catggtcagc tttgcattac accagctgac 1320 taagaaactg catatctagg aattgattta tcac 1354 // |
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