EBI Dbfetch

ID   AY128845; SV 1; linear; mRNA; STD; PLN; 1801 BP.
XX
AC   AY128845;
XX
DT   12-AUG-2002 (Rel. 72, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Arabidopsis thaliana mannosyl-oligosaccharide 1,2-alpha-mannosidase,
DE   putative (At1g51590) mRNA, complete cds.
XX
KW   FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1801
RA   Tripp M., Southwick A., Karlin-Neumann G., Nguyen M., Miranda M.,
RA   Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R.,
RA   Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J.,
RA   Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M.,
RA   Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (01-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
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CC   e-mail for correspondence: arab@sequence.stanford.edu
CC   The RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length  cDNA'): Seki,M., Narusaka,M.,  Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai, J.,
CC   Hayashizaki,Y.  and  Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Tripp,M.,
CC   Nguyen,M., Southwick,A., Karlin-Neumann,G.,  Lam,B., Miranda,M.,
CC   Palm,C.J., Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R.,
CC   Chung,M.K., Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H.,
CC   Shinn,P., Yamada,K., Ecker,J., Theologis,A. and Davis,R.W.
CC   Tripp,M, (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed equally
CC   to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford)  contributed equally to this work as PIs.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1801
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="U24808"
FT                   /note="This clone is in pENTR/SD-dTopo   This is a cloned
FT                   PCR product using RIKEN clone RAFL09-65-C03 (AY081353) as a
FT                   template ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1683
FT                   /codon_start=1
FT                   /gene="At1g51590"
FT                   /product="mannosyl-oligosaccharide 1,2-alpha-mannosidase,
FT                   putative"
FT                   /db_xref="GOA:Q9C512"
FT                   /db_xref="HSSP:1FO3"
FT                   /db_xref="InterPro:IPR001382"
FT                   /db_xref="UniProtKB/TrEMBL:Q9C512"
FT                   /protein_id="AAM91245.1"
FT                   /translation="MARSRSISGYGIWKYLNPAYYLRRPRRLALLFIVFVSVSMLVWDR
FT                   INLAREHEVEVFKLNEEVSRLEQMLEELNGGVGNKPLKTLKDAPEDPVDKQRRQKVKEA
FT                   MIHAWSSYEKYAWGKDELQPRTKDGTDSFGGLGATMVDSLDTLYIMGLDEQFQKAREWV
FT                   ASSLDFDKDYDASMFETTIRVVGGLLSAYDLSGDKMFLEKAKDIADRLLPAWNTPTGIP
FT                   YNIINLRNGNAHNPSWAAGGDSILADSGTEQLEFIALSQRTGDPKYQQKVEKVITELNK
FT                   NFPADGLLPIYINPDNANPSYSTTTFGAMGDSFYEYLLKVWVQGNKTSAVKPYRDMWEK
FT                   SMKGLLSLVKKSTPSSFTYICEKNGNNLIDKMDELACFAPGMLALGASGYGPDEEKKFL
FT                   SLAGELAWTCYNFYQSTPTKLAGENYFFTAGQDMSVGTSWNILRPETVESLFYLWRLTG
FT                   NKTYQEWGWNIFQAFEKNSRVESGYVGLKDVNTGAKDNKMQSFFLAETLKYLYLLFSPS
FT                   SVISLDEWVFNTEAHPLKIVARNDPRKPTIALRQRKFGHQINV"
XX
SQ   Sequence 1801 BP; 538 A; 315 C; 429 G; 519 T; 0 other;
     atggcgagaa gtagatcgat tagtggttat gggatatgga aatatttgaa tcctgcgtat        60
     tatcttagaa gaccgagacg tttggctttg cttttcattg tcttcgtctc tgtttctatg       120
     cttgtctggg atcgtattaa tcttgcccga gaacatgagg ttgaagtttt taagctaaat       180
     gaagaagttt cacggttgga gcagatgtta gaagagctta atggtggtgt tggcaataag       240
     cctttgaaga ctctgaagga tgccccagaa gatccagttg ataaacagcg aaggcagaaa       300
     gtaaaagagg caatgatcca tgcttggagc tcttatgaaa agtatgcatg ggggaaagat       360
     gagcttcagc ctcggacaaa agatggcact gatagctttg gtggccttgg agcaactatg       420
     gtagattctt tagatacact ctatataatg ggtctagatg agcagtttca aaaagccaga       480
     gagtgggttg caagctcatt ggatttcgac aaggattatg acgccagtat gtttgagaca       540
     accataagag ttgtaggcgg acttcttagt gcgtatgatc tttctgggga caaaatgttc       600
     cttgaaaagg ctaaggatat tgcagacaga ttattgcctg catggaatac tccaacgggt       660
     ataccttaca atattatcaa cttgagaaat ggaaatgctc acaatccttc atgggcggca       720
     gggggagaca gtattctcgc agactccggc actgagcagc tcgagtttat tgccctttcc       780
     caaaggacag gggacccaaa atatcagcag aaggtagaga aggttattac agaactgaat       840
     aagaactttc ctgctgatgg tttacttccc atctatataa atccggataa tgctaatcca       900
     tcgtactcta ccacaacatt tggtgccatg ggagatagct tttatgagta tttgctcaaa       960
     gtttgggtgc aagggaacaa aacatctgcc gtgaaaccct atagagatat gtgggagaaa      1020
     tcaatgaaag gtttgttaag cttggtcaag aaatcaacac cttcatcatt tacgtatata      1080
     tgtgagaaga acggaaataa tttgattgat aagatggatg aattggcgtg ctttgctcct      1140
     ggaatgttgg ctttaggagc ttcaggttat ggccctgatg aagaaaaaaa gtttctttca      1200
     cttgctggag agcttgcctg gacttgttat aacttttacc aatcgacacc aacgaaactt      1260
     gctggagaga actatttctt cactgcaggg caggacatga gtgttggcac atcttggaac      1320
     attttaagac cagaaaccgt tgaatcactg ttttacctct ggcgattaac tgggaacaag      1380
     acatatcaag agtggggatg gaatatattt caagcatttg agaagaactc tcgcgtagaa      1440
     tctggatatg taggcttgaa ggatgtcaat acaggtgcta aagacaacaa gatgcaaagc      1500
     ttcttcttag ctgagactct taagtatcta tatcttctct tttcgccttc atctgttatt      1560
     tcattagacg agtgggtttt caacacagaa gcccatccgc ttaagattgt ggcacggaat      1620
     gatccgcgta agccaactat agcactacgc cagaggaagt ttggtcatca gattaacgtt      1680
     tagtagacag tttctgctca aatggaattt gatattatta tatattacca caaagtttga      1740
     ggcacattgt tgtatcagtt taaagaacag atggacaacg tttttgccac agcaatttgt      1800
     a                                                                      1801
//