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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY128497; SV 1; linear; mRNA; STD; INV; 1541 BP.
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AC   AY128497;
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DT   09-JUL-2002 (Rel. 72, Created)
DT   09-JUL-2002 (Rel. 72, Last updated, Version 1)
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DE   Drosophila melanogaster RH44301 full insert cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-1541
RA   Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M.,
RA   Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R.,
RA   Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A.,
RA   Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S.,
RA   Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (03-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC    Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC    This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
CC   Science 2000). The sequence has been subjected to integrity checks
CC   for sequence accuracy, presence of a polyA tail and contiguity
CC   within 100 kb in the genome. Thus we believe the sequence to
CC   reflect accurately this particular cDNA clone. However, there are
CC   artifacts associated with the generation of cDNA clones that may
CC   have not been detected in our initial analyses such as internal
CC   priming, priming from contaminating genomic DNA, retained introns
CC   due to reverse transcription of unspliced precursor RNAs, and
CC   reverse transcriptase errors that result in single base changes.
CC   For further information about this sequence, including its location
CC   and relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to
CC   cdna@fruitfly.berkeley.edu.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1541
FT                   /organism="Drosophila melanogaster"
FT                   /strain="y; cn bw sp"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   CDS             <1..1451
FT                   /codon_start=3
FT                   /gene="Alg10"
FT                   /product="RH44301p"
FT                   /note="Longest ORF"
FT                   /db_xref="FLYBASE:FBgn0052076"
FT                   /db_xref="GOA:Q8MQM2"
FT                   /db_xref="InterPro:IPR016900"
FT                   /db_xref="UniProtKB/TrEMBL:Q8MQM2"
FT                   /protein_id="AAM75090.1"
FT                   /translation="SISTRCRLVESKNKQIQLEHSRLEGVGSKGSPTMNGSWKLILPVG
FT                   FVLYSLPLFLRVNGTSDYVIDEEFHIPQGLAFCRKEFDVWDPKITTFPGLYLIALLLNP
FT                   LSLCTVTGLRMLSLAGAGINILLLYKIRRRILAGSGGNSYAAHEAITMSVLPPLYFFSH
FT                   LYYTDTLSLTMVLLFYNYWQQEAHLPAAVFGAASVLMRQTNIVWVCMATGMTVLDTLVN
FT                   RCARTGRIPKENVRLMGKELWLQLVSSPQLLCNCILSILAKCCFYASIILPFVGFLFIN
FT                   GSIVVGDKSAHEASLHVPQLFYFAIFAAGFGISNTIRQFRPAAELIRRNRVLSLLALLL
FT                   ILVVVHLNTEVHPYLLADNRHYTFYIWSRLYGRFWWFRYAMAPAYLLSICVLFCGLRHM
FT                   PESFKLMFPLSLFLVLCFQRLLELRYFLVPYILFRLNTRHTRKGYAEWLELGAHLLLNV
FT                   ATFYVYFTKEFYWKNYRTPQRIIW"
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SQ   Sequence 1541 BP; 332 A; 415 C; 383 G; 411 T; 0 other;
     ggtccatttc cacgcgttgc cggctggttg agtccaaaaa taaacaaatc caattggagc        60
     attctcgttt ggaaggcgtc ggctcaaaag gatcgcctac catgaatggg tcctggaaac       120
     taatcctgcc cgtgggcttt gtgctgtact cgctgccact tttcctgcgg gtgaatggca       180
     catcggacta tgtaatcgac gaggagttcc acattccgca gggattggcc ttttgccgca       240
     aggaattcga tgtgtgggat cccaagataa caacatttcc gggcctctat ctgatcgccc       300
     tgctcctgaa tcccctaagt ctgtgcacgg tgacgggcct gaggatgctc agcctagcag       360
     gtgccggcat caatattctg ctgctctaca agatcagacg gcgcatcctg gccggctcgg       420
     gtggcaactc atatgccgcc catgaggcta tcaccatgtc cgtgcttccg ccgctctact       480
     tctttagcca cctttactac acggacacct tgtcgctgac catggtgctt ctgttctaca       540
     actattggca gcaggaggcg cacctgccgg cggcggtctt tggggctgcc agtgtgctta       600
     tgcgccagac gaatatcgtg tgggtatgca tggccaccgg aatgactgtg ctggacacgt       660
     tggtcaatcg atgcgcccgc actgggcgca ttcccaagga aaatgttcga ctgatgggca       720
     aagagttgtg gcttcaactc gttagcagcc cccaattgct gtgcaattgc atcctgagca       780
     tcttggccaa gtgctgtttc tacgcttcga tcattctgcc gttcgtggga ttcctcttca       840
     tcaatggttc cattgtggtg ggcgacaaga gtgcccacga ggccagtttg catgtgccgc       900
     agctattcta cttcgccatc tttgcggctg gctttgggat atccaacacc atacgtcagt       960
     ttcgtccggc agcagaatta atacgcagga atcgcgtgct gtccctattg gcattgctgc      1020
     tcatactggt ggtggtgcac ctaaacaccg aagtgcatcc ctacctgctg gctgacaaca      1080
     gacactatac attctatata tggagccgac tttatggacg gttctggtgg ttccgctacg      1140
     ccatggcgcc cgcttatctg ctctcgattt gcgtactctt ttgcggacta cgtcacatgc      1200
     cggaaagctt taagttaatg tttccactta gtctattcct ggtgctgtgc ttccagcgac      1260
     tcctggagct gcgctacttc ctggtgccgt acattctgtt tcgactcaac acacggcaca      1320
     ctcgcaaggg ttacgccgag tggctggagc tcggagctca tctgctgctc aatgtggcca      1380
     cgttttacgt gtactttaca aaggagttct actggaaaaa ctaccgcact cctcaaagga      1440
     tcatatggta gttcctttaa acggcattcc ttaacaattc aataacgtct tgggcattta      1500
     tgaaataaaa cagttcgaca ttttcaaaaa aaaaaaaaaa a                          1541
//
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