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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY128392; SV 1; linear; mRNA; STD; PLN; 1696 BP.
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AC   AY128392;
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DT   12-AUG-2002 (Rel. 72, Created)
DT   12-AUG-2002 (Rel. 72, Last updated, Version 1)
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DE   Arabidopsis thaliana unknown protein (At3g11420) mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1696
RA   Tripp M., Southwick A., Karlin-Neumann G., Nguyen M., Miranda M.,
RA   Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R.,
RA   Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J.,
RA   Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M.,
RA   Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (01-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
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CC   e-mail for correspondence: arab@sequence.stanford.edu
CC   The RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length  cDNA'): Seki,M., Narusaka,M.,  Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai, J.,
CC   Hayashizaki,Y.  and  Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Tripp,M.,
CC   Nguyen,M., Southwick,A., Karlin-Neumann,G.,  Lam,B., Miranda,M.,
CC   Palm,C.J., Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R.,
CC   Chung,M.K., Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H.,
CC   Shinn,P., Yamada,K., Ecker,J., Theologis,A. and Davis,R.W.
CC   Tripp,M, (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed equally
CC   to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford)  contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1696
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL09-06-P14 (R16899)"
FT                   /note="This clone is in pBluescript ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             163..1680
FT                   /codon_start=1
FT                   /gene="At3g11420"
FT                   /product="unknown protein"
FT                   /db_xref="InterPro:IPR006740"
FT                   /db_xref="UniProtKB/TrEMBL:Q9CAY4"
FT                   /protein_id="AAM91595.1"
FT                   /translation="MKANRGGGEHGQHEALKLSSFFFMPERPRDYLVLFTRFSVLTCLI
FT                   VSVSLVLRATFLSPSARDYSTTYGLKLTAVPQKAIALPPSASVGPTNISHIFFSIAGAA
FT                   ETWIDRSQYISLWWRNTTRGFVWLDEPVKIPENHSDVRFSIPTRVSDPGWTRFKFSSSR
FT                   AAVRIARIIWDSYRLNLPNVRWFVMGDDDTVFFTENLVKVLSKYDHEQMWYIGGNSESV
FT                   EQDVMHAYDMAFGGGGFALSRPLAARLAAAMDDCLQRYFYFYGSDQRIASCISEIGVPF
FT                   TEERGFHQLDIRGDPYGFLAAHPLAPLVSLHHLVYLDPMFPNKNPIESLQTLMKPYTLD
FT                   PNRILQQINCHDRKRQWSISISWGYTIQIYTYFLTATELTTPLQTFKTWRSSSDGPFVF
FT                   NTRPLKPDPCERPVTYFMDGAEDVRDSGTKTWYSIGDKNYGHCGKIEHTRLTKVKRILV
FT                   TSMKTDPEYWNKAPRRQCCEVMEGKVGKRKEKEMLLRIRKCRSLEKI"
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SQ   Sequence 1696 BP; 447 A; 423 C; 393 G; 433 T; 0 other;
     aaaacaataa tccagccacc gtaggggtaa ttccgtaaat ttgtaacaga aactccattc        60
     ccgcggcgta tgcagagggc aatcccgtaa acttaaccca tctccggtga tgaataatat       120
     caattccttc acgccggagt gattttccac aaaaaataag atatgaaagc aaatcgcggc       180
     ggcggagagc acggccaaca cgaggctcta aagctttcca gtttcttctt catgccggag       240
     cggccacgtg attacctcgt gcttttcaca cgtttctccg tcctcacgtg cctcatcgtc       300
     tccgtatctc ttgttctccg cgccactttt ttatcccctt ccgctcgaga ctattccacc       360
     acctacggtc tcaaattaac cgccgtacct caaaaagcca tagctctccc tccgtccgca       420
     tccgtcggac caaccaatat ctcccatatc ttcttctcta tcgccggagc agctgagaca       480
     tggatcgatc ggagccagta catctcctta tggtggcgaa acacgacacg tggcttcgtc       540
     tggctcgatg aaccggtgaa aatccctgaa aatcactccg atgtcagatt ctcgatcccg       600
     actcgagttt ctgatccagg ctggactcga ttcaaattct ccagctcaag agccgcggtt       660
     cgaatcgctc gtataatctg ggatagttat cggttaaatc taccaaatgt ccggtggttc       720
     gtcatgggag atgacgatac cgtcttcttc accgagaatc tcgtcaaggt tctctcaaag       780
     tacgaccacg agcagatgtg gtacatcgga ggaaactcag agagcgtcga gcaagacgtg       840
     atgcacgcgt acgatatggc gtttggcggc ggtggtttcg ctctgagccg tccattagcg       900
     gcgcgtttgg ccgccgcgat ggatgattgt ctccaacgtt atttctattt ttacggttct       960
     gatcagagaa tcgcgtcttg catcagcgag atcggcgttc cgttcaccga agaacgcggt      1020
     tttcatcagc ttgacataag aggagatcca tacgggtttc tagcggcgca tccattggca      1080
     ccgcttgtat cgttgcatca ccttgtttac ttagacccaa tgttccctaa caaaaacccg      1140
     atcgagtcgt tacagaccct aatgaaacct tataccttag acccgaatcg aatactccaa      1200
     cagattaatt gtcatgatcg caaacgtcaa tggtctatat ccatctcttg gggatacacc      1260
     attcagatat acacttactt cttgactgct acggagctga ctacgccgtt gcagaccttc      1320
     aaaacttggc ggtcttccag cgatggacct ttcgtgttta acactcggcc cttgaaacct      1380
     gacccctgtg agcgtccggt cacttatttc atggatggtg ccgaggatgt acgggatagt      1440
     gggacgaaaa cttggtatag cataggggat aagaactatg gtcattgcgg aaagattgag      1500
     catactcgat taactaaagt gaagaggata ttggtgactt caatgaagac ggatcctgag      1560
     tattggaaca aggcaccgag gagacagtgt tgtgaggtga tggaaggaaa agtaggaaaa      1620
     agaaaagaga aagaaatgtt gttaaggatt agaaaatgca gatctttgga gaagatataa      1680
     aaaaagcgtt ttaact                                                      1696
//
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