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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY128379; SV 1; linear; mRNA; STD; PLN; 1628 BP.
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AC   AY128379;
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DT   12-AUG-2002 (Rel. 72, Created)
DT   12-AUG-2002 (Rel. 72, Last updated, Version 1)
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DE   Arabidopsis thaliana unknown protein (At1g16570) mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1628
RA   Tripp M., Southwick A., Karlin-Neumann G., Nguyen M., Miranda M.,
RA   Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R.,
RA   Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J.,
RA   Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M.,
RA   Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (01-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
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CC   e-mail for correspondence: arab@sequence.stanford.edu
CC   The RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length  cDNA'): Seki,M., Narusaka,M.,  Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai, J.,
CC   Hayashizaki,Y.  and  Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Tripp,M.,
CC   Nguyen,M., Southwick,A., Karlin-Neumann,G.,  Lam,B., Miranda,M.,
CC   Palm,C.J., Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R.,
CC   Chung,M.K., Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H.,
CC   Shinn,P., Yamada,K., Ecker,J., Theologis,A. and Davis,R.W.
CC   Tripp,M, (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed equally
CC   to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford)  contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1628
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL07-11-K15 (R16251)"
FT                   /note="This clone is in pBluescript ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             46..1443
FT                   /codon_start=1
FT                   /gene="At1g16570"
FT                   /product="unknown protein"
FT                   /db_xref="GOA:Q8L7M0"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="UniProtKB/TrEMBL:Q8L7M0"
FT                   /protein_id="AAM91582.1"
FT                   /translation="MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSI
FT                   PHEAVLNHPSIHIHTMAQPRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIF
FT                   LVQNPPSVPTLIAVKWASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYG
FT                   KMATGSLCVTKAMQHELDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPI
FT                   GVYDFISRELENQELNETLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVM
FT                   YDRRVAARSKGSETAEISEEQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMW
FT                   LAAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKN
FT                   GLLFSSSSELADQLLILFKGFPGNCDALMSLKAGAMETGSSGRWATEWEDCAKPLITQV
FT                   VSQIADS"
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SQ   Sequence 1628 BP; 443 A; 319 C; 368 G; 498 T; 0 other;
     ttttttgccc ggcgcatatc gacgggatct agtagatccg gaacgatggg gaaaagagga        60
     agggcttgtg tagtggtact tggagatctt ggtcgaagtc ctcggatgca atatcacgct       120
     ctttctcttg ctcgtcaggc atcatttcaa gtggacattg ttgcatatgg aggttctata       180
     ccccatgaag ctgttctaaa tcacccatca atccacatcc ataccatggc gcagcctcga       240
     ttcattcagt actttccaaa gatactttat cctgtaactc tcttgctcaa ggcatttatt       300
     cagtttacaa tgcttctctg gtttcttttc gttaaagtac cagcgcctga cattttcttg       360
     gtccagaatc ctccttccgt cccaactcta attgctgtta agtgggcgag ttcatggaga       420
     cgtgcagcgt ttgttgtaga ttggcataat tttggatata cgttgttggc attgtcttta       480
     ggaagaaaca atttgcttgt atccttatac cgctggtctg agaatcatta tggaaagatg       540
     gcaacaggtt cgctatgtgt cacaaaagca atgcaacatg aactggatca gaattggggt       600
     gtgagagcca aagtgttata tgatcagcct cctgagtttt tccgtcccgc tttgcttgaa       660
     gaaaggcatg agttgttttg ccgagtgagg aaggatcttt gccatccaat tggtgtctat       720
     gatttcatta gtagagagtt ggaaaaccaa gagcttaatg aaaccctttt tactaccaaa       780
     tttaatgctg acatctcgct gaagcaaaac agaccagctc ttgttgtgag tagtacaagc       840
     tggacccctg atgaaaattt tggtatccta ctggaagctg cagtgatgta tgatcggcgt       900
     gtggctgcaa gatcaaaagg aagtgaaaca gctgaaattt cagaagagca acaccattat       960
     cccaatttgt tgttcatcat tacaggtaaa ggacctgaaa aggagatgta cgaggagaaa      1020
     atcaaacgat taaaccttag acatgtggca ttccgtacaa tgtggctcgc agctgaagat      1080
     tacccattgc ttttaggttc tgcagatctc ggtgtctgct tacacacttc ctcgtcgggt      1140
     ttagaccttc ccatgaaggt tgttgatatg tttggatgtg gcctcccagt ttgctcggtt      1200
     tcctactcat gcattcaaga actcgttaaa gatgggaaga acggactttt gttttcatct      1260
     tcatcagaat tagcagatca attattgatt ctcttcaagg gttttccagg gaactgtgat      1320
     gcactaatgt cgcttaaagc gggtgcaatg gagactggtt cttcgggtcg atgggctaca      1380
     gagtgggaag attgtgcaaa acctttaatc actcaggtcg tgtctcaaat tgcagattca      1440
     tgaaagagaa gactcaaaat cgatgggctt gagagtttct cacacaactg cttttgtaga      1500
     tccaaatttt tatacaaaat cctatagatt acaagattgt ctcgaaaata ttgacagaat      1560
     ctgaattcaa aatggtttcg catgagtctg tgtatgaatg agtaaatgat atcaaaatct      1620
     ttcttaac                                                               1628
//
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